Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 2.4e-122 442.2 222 100.0
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 3.2e-42 176.0 193 44.0
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 3.0e-40 169.5 172 48.3
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 5.0e-40 168.7 161 52.2
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 2.5e-39 166.4 193 43.0
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 2.5e-39 166.4 164 43.9
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 5.6e-39 165.2 164 45.7
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 9.5e-39 164.5 180 43.3
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.2e-38 164.1 164 43.9
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 3.6e-38 162.5 193 42.0
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 6.2e-38 161.8 161 44.7
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.4e-37 160.6 162 43.2
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.4e-37 160.6 162 43.8
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 2.3e-37 159.8 164 45.1
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.3e-37 159.8 162 43.8
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 3.1e-37 159.5 163 41.7
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.1e-37 159.5 175 40.0
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 3.1e-37 159.5 179 42.5
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.1e-37 159.5 201 43.8
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 6.8e-37 158.3 189 41.3
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 6.8e-37 158.3 197 40.1
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 8.9e-37 157.9 162 43.2
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 8.9e-37 157.9 162 43.2
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.5e-36 157.1 174 39.7
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.5e-36 157.1 162 42.0
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 2.6e-36 156.4 160 43.8
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 3.4e-36 156.0 163 44.8
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 9.8e-36 154.5 181 40.9
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 9.8e-36 154.5 194 38.1
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 9.8e-36 154.5 172 42.4
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.3e-35 154.1 169 42.6
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.3e-35 154.1 194 37.6
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.7e-35 153.7 141 51.1
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 2.2e-35 153.3 161 42.2
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 2.2e-35 153.3 181 40.3
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.9e-35 152.9 165 43.0
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 2.9e-35 152.9 169 42.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 3.7e-35 152.5 161 41.6
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 3.7e-35 152.5 155 43.2
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.7e-35 152.5 161 42.9
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 4.9e-35 152.1 174 39.7
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 4.9e-35 152.1 162 41.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 6.4e-35 151.8 161 41.6
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.4e-34 150.6 169 40.2
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 3.2e-34 149.4 162 40.7
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 5.4e-34 148.7 160 41.9
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 5.4e-34 148.7 193 37.8
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 5.4e-34 148.7 157 42.0
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 7.1e-34 148.3 191 37.7
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.6e-33 147.1 190 36.3
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 1.6e-33 147.1 190 36.3
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.6e-33 147.1 193 35.2
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 1.6e-33 147.1 191 36.1
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.7e-33 146.4 172 39.0
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 2.7e-33 146.4 183 38.3
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 3.5e-33 146.0 155 41.3
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.5e-33 146.0 187 35.8
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 3.5e-33 146.0 187 36.4
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 4.6e-33 145.6 179 38.5
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 4.6e-33 145.6 194 35.6
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 6.0e-33 145.2 160 40.0
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 7.8e-33 144.8 196 36.2
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.0e-32 144.4 154 41.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.0e-32 144.4 158 41.1
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 1.0e-32 144.4 196 35.7
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.0e-32 144.4 160 43.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.3e-32 144.1 187 35.3
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.7e-32 143.7 190 35.8
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 1.7e-32 143.7 161 39.8
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.7e-32 143.7 177 37.3
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 2.3e-32 143.3 148 43.9
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.9e-32 142.5 162 38.9
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 3.9e-32 142.5 191 35.1
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 5.1e-32 142.1 160 40.0
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 5.1e-32 142.1 155 41.3
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 6.6e-32 141.7 149 42.3
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 8.6e-32 141.4 155 39.4
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.9e-31 140.2 156 44.9
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.9e-31 140.2 162 38.3
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 5.6e-31 138.7 194 34.0
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 5.6e-31 138.7 142 44.4
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 9.5e-31 137.9 155 37.4
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 9.5e-31 137.9 236 35.2
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 6.2e-30 135.2 194 36.1
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 8.1e-30 134.8 194 36.6
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 1.1e-29 134.4 194 36.1
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.4e-29 134.0 179 37.4
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 1.8e-29 133.7 182 35.7
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.8e-29 133.7 192 34.4
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.8e-29 133.7 120 51.7
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 2.3e-29 133.3 157 38.9
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 6.8e-29 131.7 195 35.4
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.0e-28 130.2 173 35.8
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.0e-28 130.2 143 41.3
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 3.4e-28 129.4 191 34.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.4e-28 129.0 166 38.6
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 4.4e-28 129.0 160 36.9
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.1e-26 124.4 141 41.8
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.4e-26 122.1 154 39.0
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 7.1e-26 121.7 194 35.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.1e-25 120.2 195 34.9
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.0e-24 116.3 116 43.1
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 2.9e-19 99.8 133 37.6
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 3.8e-19 99.4 279 24.7
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 4.2e-18 95.9 165 40.0
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.7e-16 90.5 175 33.7
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 6.6e-16 88.6 184 37.5
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.5e-15 87.4 164 32.3
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.5e-12 77.4 66 47.0
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.7e-11 73.9 72 48.6
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-08 62.4 118 33.9
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 9.6e-07 58.2 75 40.0


User provided reference genes

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