Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO244G0098 Selaginella moellendorffii HOM05D003384 ORTHO05D376564 2.3e-61 238.8 126 100.0
SMO009G0025 Selaginella moellendorffii HOM05D003384 ORTHO05D378488 1.3e-45 186.4 99 96.0
SMO036G0002 Selaginella moellendorffii HOM05D003384 ORTHO05D374652 2.3e-45 185.7 99 96.0
SMO077G0006 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.1e-43 179.1 105 90.5
SMO162G0012 Selaginella moellendorffii HOM05D003384 ORTHO05D375018 3.0e-37 158.7 113 80.5
SMO364G0055 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 1.6e-30 136.3 79 92.4
SMO199G0120 Selaginella moellendorffii HOM05D003384 ORTHO05D376227 4.6e-30 134.8 79 91.1
SMO353G0102 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 7.8e-22 107.5 80 77.5
SMO112G0025 Selaginella moellendorffii HOM05D003384 ORTHO05D378420 1.3e-19 100.1 51 100.0
SMO353G0290 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 1.3e-19 100.1 51 100.0
SMO286G0018 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 3.8e-16 88.6 83 63.9
SMO149G0003 Selaginella moellendorffii HOM05D003384 ORTHO05D375727 1.4e-15 86.7 99 56.6
SMO358G0063 Selaginella moellendorffii HOM05D003384 ORTHO05D005024 9.0e-10 67.4 71 57.7
CBR_g19873 Chara braunii HOM05D003384 ORTHO05D005024 8.4e-08 60.8 77 50.6
Zm00001eb055170 Zea mays HOM05D003384 ORTHO05D005024 1.1e-07 60.5 77 50.6
Pp3c6_8600 Physcomitrium patens HOM05D003384 ORTHO05D005024 2.4e-07 59.3 71 52.1
vmacro20478 Vaccinium macrocarpon HOM05D003384 ORTHO05D005024 2.4e-07 59.3 77 49.4
Mapoly0047s0031 Marchantia polymorpha HOM05D003384 ORTHO05D005024 3.2e-07 58.9 71 52.1
Rhsim08G0242600 Rhododendron simsii HOM05D003384 ORTHO05D005024 3.2e-07 58.9 77 48.1
Rhsim10G0184100 Rhododendron simsii HOM05D003384 ORTHO05D005024 3.2e-07 58.9 77 48.1
SMO011G0040 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 4.2e-07 58.5 41 73.2
SMO116G0212 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 4.2e-07 58.5 41 73.2
SMO347G0175 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 4.2e-07 58.5 41 73.2
Zm00001eb067720 Zea mays HOM05D003384 ORTHO05D005024 4.2e-07 58.5 77 49.4
SEGI_27631 Sequoiadendron giganteum HOM05D003384 ORTHO05D005024 5.5e-07 58.2 77 48.1
AagrBONN_evm.TU.Sc2ySwM_344.2607 Anthoceros agrestis HOM05D003384 ORTHO05D005024 7.1e-07 57.8 71 47.9
Os05g0104650 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 9.3e-07 57.4 71 49.3
Sed0002627 Sechium edule HOM05D003384 ORTHO05D005024 9.3e-07 57.4 71 50.7
Os01g0888500 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 1.2e-06 57.0 71 49.3
Peaxi162Scf00685g00122 Petunia axillaris HOM05D003384 ORTHO05D005024 1.2e-06 57.0 77 46.8
SMO341G0001 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 1.2e-06 57.0 33 84.8
Thecc.05G055600 Theobroma cacao HOM05D003384 ORTHO05D005024 1.6e-06 56.6 77 48.1
Gohir.A06G008900 Gossypium hirsutum HOM05D003384 ORTHO05D005024 2.1e-06 56.2 77 46.8
MBI14_g11677_MAGBIO Magnolia biondii HOM05D003384 ORTHO05D005024 2.1e-06 56.2 77 46.8
Actinidia02926 Actinidia chinensis HOM05D003384 ORTHO05D005024 2.7e-06 55.8 77 46.8
CAN.G606.41 Capsicum annuum HOM05D003384 ORTHO05D005024 2.7e-06 55.8 77 48.1
Migut.F00756 Erythranthe guttata HOM05D003384 ORTHO05D005024 2.7e-06 55.8 77 46.8
Peaxi162Scf00668g00439 Petunia axillaris HOM05D003384 ORTHO05D005024 2.7e-06 55.8 77 45.5
Carub.0002s2105 Capsella rubella HOM05D003384 ORTHO05D005024 3.5e-06 55.5 78 44.9
CDE05G0219 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 46.8
CDE05G1365 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 46.8
MELO3C018382.2 Cucumis melo HOM05D003384 ORTHO05D005024 3.5e-06 55.5 71 47.9
CsaV3_5G010490 Cucumis sativus L. HOM05D003384 ORTHO05D005024 3.5e-06 55.5 71 47.9
Duzib093G0913 Durio zibethinus HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 46.8
Oeu001502.2 Olea europaea HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 46.8
Potri.010G200200 Populus trichocarpa HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 48.1
Prupe.8G024000 Prunus persica HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 46.8
Solyc01g107270.4 Solanum lycopersicum HOM05D003384 ORTHO05D005024 3.5e-06 55.5 77 48.1
ATR0580G036 Amborella trichopoda HOM05D003384 ORTHO05D005024 4.6e-06 55.1 71 46.5
CSS0047277 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 4.6e-06 55.1 77 45.5
Thhalv10018011m.g Eutrema salsugineum HOM05D003384 ORTHO05D005024 4.6e-06 55.1 77 46.8
Sabra10G0154400 Salix brachista HOM05D003384 ORTHO05D005024 4.6e-06 55.1 77 48.1
TAR629G0479 Trochodendron aralioides HOM05D003384 ORTHO05D005024 4.6e-06 55.1 77 45.5
BcaC08g46858 Brassica carinata HOM05D003384 ORTHO05D005024 6.0e-06 54.7 79 45.6
C06p33470 Brassica napus HOM05D003384 ORTHO05D005024 6.0e-06 54.7 79 45.6
C06p48450 Brassica napus HOM05D003384 ORTHO05D005024 6.0e-06 54.7 79 45.6
BolC6t38461H Brassica oleracea HOM05D003384 ORTHO05D005024 6.0e-06 54.7 79 45.6
BolC6t39873H Brassica oleracea HOM05D003384 ORTHO05D005024 6.0e-06 54.7 79 45.6
BraA07t30586Z Brassica rapa HOM05D003384 ORTHO05D005024 6.0e-06 54.7 79 45.6
Cfa014646 Carpinus fangiana HOM05D003384 ORTHO05D005024 6.0e-06 54.7 77 46.8
CiPaw.01G290900 Carya illinoinensis HOM05D003384 ORTHO05D005024 6.0e-06 54.7 77 46.8
Lj8C80T4 Lonicera japonica HOM05D003384 ORTHO05D005024 6.0e-06 54.7 77 45.5
Nitab4.5_0000333g0100 Nicotiana tabacum HOM05D003384 ORTHO05D005024 6.0e-06 54.7 77 46.8
Nitab4.5_0001169g0010 Nicotiana tabacum HOM05D003384 ORTHO05D005024 6.0e-06 54.7 77 46.8
PSO478G4441 Papaver somniferum HOM05D003384 ORTHO05D005024 6.0e-06 54.7 71 47.9
PSO782G4051 Papaver somniferum HOM05D003384 ORTHO05D005024 6.0e-06 54.7 71 47.9
BcaC08g45597 Brassica carinata HOM05D003384 ORTHO05D005024 7.9e-06 54.3 67 46.3
A07p40090 Brassica napus HOM05D003384 ORTHO05D005024 7.9e-06 54.3 76 46.1
BraA07t31553Z Brassica rapa HOM05D003384 ORTHO05D005024 7.9e-06 54.3 79 44.3
Cfa001433 Carpinus fangiana HOM05D003384 ORTHO05D005024 7.9e-06 54.3 77 45.5
COL.COLO4_27063 Corchorus olitorius HOM05D003384 ORTHO05D005024 7.9e-06 54.3 77 45.5
Haze_17110 Corylus avellana HOM05D003384 ORTHO05D005024 7.9e-06 54.3 77 46.8
Sc09g0005970 Simmondsia chinensis HOM05D003384 ORTHO05D005024 7.9e-06 54.3 77 46.8
SGA_v2.0_scaffold2G01034 Striga asiatica HOM05D003384 ORTHO05D005024 7.9e-06 54.3 77 45.5


User provided reference genes

Program Settings