Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 3.9e-75 284.6 137 100.0
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 3.7e-41 171.8 129 62.0
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 2.4e-40 169.1 128 61.7
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 2.0e-39 166.0 127 63.0
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 4.2e-37 158.3 129 54.3
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 7.2e-37 157.5 129 54.3
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 6.1e-36 154.5 129 55.8
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 6.1e-36 154.5 130 53.8
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 1.4e-35 153.3 129 51.9
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 1.8e-35 152.9 129 55.0
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.8e-35 152.9 129 53.5
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 2.3e-35 152.5 130 53.1
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 3.0e-35 152.1 129 54.3
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 8.8e-35 150.6 129 53.5
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 8.8e-35 150.6 129 53.5
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 8.8e-35 150.6 129 51.9
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.5e-34 149.8 139 56.1
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.5e-34 149.8 129 50.4
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 1.5e-34 149.8 129 53.5
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.0e-34 149.4 127 51.2
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.6e-34 149.1 130 50.0
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.6e-34 149.1 130 50.0
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 3.3e-34 148.7 129 51.9
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 4.4e-34 148.3 129 55.0
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 5.7e-34 147.9 129 51.2
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 5.7e-34 147.9 130 53.8
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 5.7e-34 147.9 131 51.9
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 5.7e-34 147.9 130 53.1
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 9.7e-34 147.1 129 51.9
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 9.7e-34 147.1 129 52.7
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 9.7e-34 147.1 128 51.6
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.3e-33 146.7 129 52.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.3e-33 146.7 131 51.1
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.3e-33 146.7 129 51.2
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.7e-33 146.4 131 48.9
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 1.7e-33 146.4 129 50.4
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 1.7e-33 146.4 128 51.6
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 1.7e-33 146.4 130 50.8
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 2.2e-33 146.0 130 50.0
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 2.2e-33 146.0 130 52.3
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.2e-33 146.0 129 51.9
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 2.8e-33 145.6 130 53.1
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 3.7e-33 145.2 130 52.3
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 3.7e-33 145.2 130 53.1
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.7e-33 145.2 129 50.4
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 6.3e-33 144.4 129 51.9
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 8.2e-33 144.1 130 50.0
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 8.2e-33 144.1 131 51.1
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 8.2e-33 144.1 129 51.9
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 8.2e-33 144.1 125 52.8
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 8.2e-33 144.1 130 53.1
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.1e-32 143.7 130 49.2
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.4e-32 143.3 129 50.4
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.8e-32 142.9 117 53.8
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.8e-32 142.9 129 51.9
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.4e-32 142.5 129 50.4
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 2.4e-32 142.5 130 51.5
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 2.4e-32 142.5 130 48.5
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.4e-32 142.5 130 48.5
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.4e-32 142.5 130 48.5
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 2.4e-32 142.5 129 49.6
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 3.1e-32 142.1 130 50.8
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 4.1e-32 141.7 130 49.2
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 5.3e-32 141.4 129 51.9
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 5.3e-32 141.4 133 51.1
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 5.3e-32 141.4 129 51.2
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 7.0e-32 141.0 130 48.5
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 7.0e-32 141.0 131 49.6
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 7.0e-32 141.0 130 50.8
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 1.2e-31 140.2 130 48.5
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.2e-31 140.2 132 51.5
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 1.2e-31 140.2 132 51.5
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.2e-31 140.2 125 52.0
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 1.5e-31 139.8 130 46.9
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 1.5e-31 139.8 130 46.9
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.5e-31 139.8 130 50.0
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.6e-31 139.0 131 48.9
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 2.6e-31 139.0 125 48.0
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 2.6e-31 139.0 129 48.1
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 3.5e-31 138.7 90 63.3
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 3.5e-31 138.7 126 50.0
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 3.5e-31 138.7 116 51.7
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 4.5e-31 138.3 130 50.0
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 5.9e-31 137.9 133 48.1
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 7.7e-31 137.5 125 46.4
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 7.7e-31 137.5 125 46.4
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 7.7e-31 137.5 125 46.4
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 7.7e-31 137.5 129 47.3
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 7.7e-31 137.5 129 48.1
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.3e-30 136.7 129 48.1
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 1.3e-30 136.7 130 49.2
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 1.7e-30 136.3 129 48.1
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 2.9e-30 135.6 117 51.3
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 5.0e-30 134.8 130 49.2
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 5.0e-30 134.8 133 52.6
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.1e-29 133.7 90 58.9
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.9e-29 132.9 102 55.9
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.5e-29 132.5 125 48.0
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 3.2e-29 132.1 167 42.5
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 4.2e-29 131.7 135 46.7
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 5.5e-29 131.3 127 46.5
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 9.4e-29 130.6 124 46.0
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.1e-28 129.4 127 45.7
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.7e-28 129.0 129 45.0
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 4.7e-28 128.3 132 47.7
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 2.3e-27 125.9 129 48.1
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 3.9e-27 125.2 110 50.9
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 2.6e-26 122.5 127 48.0
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 5.7e-26 121.3 81 60.5
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.2e-25 119.4 81 60.5
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 4.1e-24 115.2 81 60.5
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 2.6e-23 112.5 80 60.0
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 6.5e-22 107.8 117 51.3
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 8.5e-22 107.5 80 57.5
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 2.7e-15 85.9 68 54.4
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 2.2e-14 82.8 62 54.8
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 6.5e-14 81.3 102 38.2
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 9.4e-13 77.4 113 37.2
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 1.8e-11 73.2 54 57.4
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.3e-09 67.0 59 49.2
Cre12.g549500 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 3.7e-09 65.5 92 35.9
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.5e-07 58.9 48 52.1
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.9e-07 58.2 41 58.5


User provided reference genes

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