Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.9e-80 302.4 148 100.0
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.3e-44 183.3 149 63.1
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.1e-43 180.3 133 66.2
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 5.5e-43 177.9 145 60.7
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.0e-41 172.2 144 60.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.6e-40 169.1 123 67.5
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.8e-39 165.6 123 63.4
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 5.4e-38 161.4 129 58.9
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 3.8e-36 155.2 122 56.6
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 4.3e-35 151.8 129 55.8
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.3e-35 151.8 129 55.8
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 9.5e-35 150.6 127 56.7
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-34 150.2 126 55.6
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.1e-34 149.4 129 53.5
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.1e-34 149.4 129 53.5
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.1e-34 149.4 129 55.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.8e-34 149.1 129 54.3
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.8e-34 149.1 129 54.3
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.8e-34 149.1 129 54.3
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.8e-34 149.1 129 54.3
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.6e-34 148.7 129 51.9
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.6e-34 148.7 129 55.0
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 4.7e-34 148.3 119 58.0
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.7e-34 148.3 129 55.8
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 6.1e-34 147.9 129 54.3
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 8.0e-34 147.5 129 53.5
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 8.0e-34 147.5 127 55.9
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.0e-33 147.1 122 55.7
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.0e-33 147.1 119 57.1
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.0e-33 147.1 129 54.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.4e-33 146.7 117 56.4
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.4e-33 146.7 122 57.4
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.4e-33 146.7 123 54.5
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.8e-33 146.4 117 61.5
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.8e-33 146.4 119 59.7
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.3e-33 146.0 122 53.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.3e-33 146.0 129 52.7
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.3e-33 146.0 122 54.1
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 3.0e-33 145.6 117 56.4
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 3.0e-33 145.6 131 51.9
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 4.0e-33 145.2 129 52.7
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 4.0e-33 145.2 131 55.7
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 4.0e-33 145.2 122 55.7
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 5.2e-33 144.8 129 54.3
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 5.2e-33 144.8 122 55.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 5.2e-33 144.8 121 56.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 5.2e-33 144.8 121 53.7
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 5.2e-33 144.8 115 56.5
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 5.2e-33 144.8 130 53.8
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 5.2e-33 144.8 119 58.0
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 5.2e-33 144.8 129 55.0
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.8e-33 144.4 109 59.6
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 6.8e-33 144.4 126 54.0
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 8.9e-33 144.1 122 54.9
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.2e-32 143.7 119 54.6
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.2e-32 143.7 134 51.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.2e-32 143.7 127 56.7
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.5e-32 143.3 124 54.8
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.5e-32 143.3 123 56.1
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.5e-32 143.3 119 55.5
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.5e-32 143.3 116 55.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.5e-32 143.3 134 51.5
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 2.0e-32 142.9 123 53.7
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.0e-32 142.9 129 51.9
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.0e-32 142.9 123 55.3
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.0e-32 142.9 128 53.9
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.0e-32 142.9 128 53.9
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.0e-32 142.9 132 53.8
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.6e-32 142.5 122 55.7
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 2.6e-32 142.5 122 55.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.6e-32 142.5 120 56.7
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.6e-32 142.5 127 53.5
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.6e-32 142.5 129 51.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 2.6e-32 142.5 132 53.8
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.4e-32 142.1 122 54.1
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.4e-32 141.7 129 51.9
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 5.8e-32 141.4 122 55.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 5.8e-32 141.4 122 55.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.8e-32 141.4 122 55.7
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 5.8e-32 141.4 116 57.8
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 5.8e-32 141.4 122 54.1
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 7.5e-32 141.0 120 55.8
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 7.5e-32 141.0 122 55.7
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 7.5e-32 141.0 130 53.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 7.5e-32 141.0 130 53.1
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 7.5e-32 141.0 123 53.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 9.8e-32 140.6 122 52.5
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 9.8e-32 140.6 138 49.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 9.8e-32 140.6 138 49.3
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 9.8e-32 140.6 121 56.2
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.8e-32 140.6 122 50.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.8e-32 140.6 122 50.8
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 9.8e-32 140.6 122 54.1
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.3e-31 140.2 120 55.0
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.3e-31 140.2 129 51.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.3e-31 140.2 119 52.9
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.3e-31 140.2 119 54.6
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.2e-31 139.4 117 57.3
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.2e-31 139.4 122 52.5
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.2e-31 139.4 126 50.8
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 2.9e-31 139.0 122 53.3
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.9e-31 139.0 115 56.5
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.7e-31 138.7 118 53.4
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 4.9e-31 138.3 122 54.9
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 6.4e-31 137.9 120 53.3
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 8.3e-31 137.5 122 54.1
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.4e-30 136.0 134 50.0
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 4.1e-30 135.2 122 54.1
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 9.2e-30 134.0 131 50.4
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 2.7e-29 132.5 118 54.2
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 3.5e-29 132.1 117 55.6
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.0e-29 131.3 137 49.6
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 6.0e-29 131.3 127 52.0
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.9e-27 126.3 104 54.8
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.5e-27 125.9 112 50.9
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.6e-26 123.2 92 62.0
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 2.8e-26 122.5 100 58.0
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.3e-25 119.4 94 59.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 2.3e-25 119.4 132 46.2
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 4.0e-25 118.6 128 47.7
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.7e-23 113.2 129 43.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.9e-22 109.8 129 43.4
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.9e-22 109.8 96 52.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.1e-22 108.6 81 58.0
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.7e-21 105.9 77 61.0
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 7.8e-21 104.4 93 53.8
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.2e-18 94.7 87 48.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 2.3e-17 92.8 70 62.9
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.9e-11 73.2 53 60.4
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 5.6e-11 71.6 100 39.0
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.1e-09 67.4 88 38.6


User provided reference genes

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