Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO241G0012 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 4.6e-88 327.8 158 100.0
SMO111G0230 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 6.6e-18 94.7 133 36.8
SMO232G0054 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 6.6e-18 94.7 115 39.1
SMO351G0668 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 7.3e-17 91.3 132 36.4
PSO063G5977 Papaver somniferum HOM05D007206 ORTHO05D009176 6.0e-11 71.6 130 35.4
MBI07_g30189_MAGBIO Magnolia biondii HOM05D002105 ORTHO05D001271 1.7e-10 70.1 148 31.1
SMO133G0010 Selaginella moellendorffii HOM05D007206 ORTHO05D002427 1.7e-10 70.1 154 32.5
CANSAT56G3078 Cannabis sativa HOM05D005469 ORTHO05D001701 3.9e-10 68.9 166 31.3
Sed0016601 Sechium edule HOM05D007206 ORTHO05D009176 3.9e-10 68.9 129 31.0
CANSAT56G4151 Cannabis sativa HOM05D005469 ORTHO05D001701 5.1e-10 68.6 166 31.3
ClCG03G008180 Citrullus lanatus HOM05D003009 ORTHO05D001701 6.6e-10 68.2 127 33.1
Duzib160G0415 Durio zibethinus HOM05D003009 ORTHO05D001701 6.6e-10 68.2 124 33.9
MELO3C002610.2 Cucumis melo HOM05D003009 ORTHO05D001701 8.6e-10 67.8 127 33.1
SMO133G0035 Selaginella moellendorffii HOM05D005469 ORTHO05D001701 8.6e-10 67.8 113 38.1
EL10Ac9g22544 Beta vulgaris HOM05D007206 ORTHO05D009176 1.1e-09 67.4 120 34.2
AUR62012286 Chenopodium quinoa HOM05D005469 ORTHO05D001701 1.5e-09 67.0 136 33.1
AUR62022927 Chenopodium quinoa HOM05D005469 ORTHO05D001701 1.5e-09 67.0 136 33.1
CsaV3_1G012370 Cucumis sativus L. HOM05D003009 ORTHO05D001701 2.5e-09 66.2 127 32.3
Os01g0164300 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 2.5e-09 66.2 137 33.6
BcaC01g04253 Brassica carinata HOM05D007206 ORTHO05D009176 4.3e-09 65.5 125 33.6
BolC3t16614H Brassica oleracea HOM05D007206 ORTHO05D009176 4.3e-09 65.5 125 33.6
BraA03t12750Z Brassica rapa HOM05D007206 ORTHO05D009176 4.3e-09 65.5 131 32.8
Duzib192G0967 Durio zibethinus HOM05D003009 ORTHO05D001701 5.6e-09 65.1 124 33.9
ATR0737G038 Amborella trichopoda HOM05D003009 ORTHO05D001701 9.5e-09 64.3 154 29.2
C03p43430 Brassica napus HOM05D007206 ORTHO05D009176 9.5e-09 64.3 131 32.8
BcaB03g11581 Brassica carinata HOM05D007206 ORTHO05D009176 2.1e-08 63.2 124 33.1
MELO3C018370.2 Cucumis melo HOM05D005469 ORTHO05D001701 2.1e-08 63.2 165 30.9
A03p35770 Brassica napus HOM05D007206 ORTHO05D009176 2.8e-08 62.8 126 34.1
Sc02g0001330 Simmondsia chinensis HOM05D007206 ORTHO05D009176 2.8e-08 62.8 140 30.7
Carub.0003s0903 Capsella rubella HOM05D007206 ORTHO05D009176 4.7e-08 62.0 125 32.8
COL.COLO4_25530 Corchorus olitorius HOM05D005469 ORTHO05D001701 4.7e-08 62.0 160 31.2
QL07p041366 Quercus lobata HOM05D007206 ORTHO05D009176 4.7e-08 62.0 134 30.6
SalBow3G1256 Salvia bowleyana HOM05D005469 ORTHO05D001701 4.7e-08 62.0 171 31.0
Duzib235G1045 Durio zibethinus HOM05D003009 ORTHO05D001701 6.2e-08 61.6 124 32.3
CsaV3_5G010340 Cucumis sativus L. HOM05D005469 ORTHO05D001701 8.1e-08 61.2 165 30.9
Migut.F00654 Erythranthe guttata HOM05D005469 ORTHO05D001701 8.1e-08 61.2 133 32.3
HanXRQChr14g0459401 Helianthus annuus HOM05D005469 ORTHO05D001701 8.1e-08 61.2 172 28.5
Nitab4.5_0003391g0070 Nicotiana tabacum HOM05D000087 ORTHO05D000793 8.1e-08 61.2 137 31.4
Sp3g08280 Schrenkiella parvula HOM05D007206 ORTHO05D009176 8.1e-08 61.2 125 32.8
TAR633G0722 Trochodendron aralioides HOM05D005469 ORTHO05D001701 8.1e-08 61.2 166 28.9
Ah.10g036310 Amaranthus hybridus HOM05D005469 ORTHO05D001701 1.1e-07 60.8 169 30.8
AL3G21200 Arabidopsis lyrata HOM05D007206 ORTHO05D009176 1.1e-07 60.8 125 32.0
CARHR084450 Cardamine hirsuta HOM05D007206 ORTHO05D009176 1.1e-07 60.8 125 32.0
AUR62017024 Chenopodium quinoa HOM05D003009 ORTHO05D001701 1.1e-07 60.8 126 32.5
Haze_17260 Corylus avellana HOM05D005469 ORTHO05D001701 1.4e-07 60.5 169 31.4
Peaxi162Scf00045g02525 Petunia axillaris HOM05D000087 ORTHO05D000793 1.4e-07 60.5 137 29.9
Cpa.g.sc5.124 Carica papaya HOM05D007206 ORTHO05D009176 1.8e-07 60.1 128 32.0
COL.COLO4_15412 Corchorus olitorius HOM05D005469 ORTHO05D001701 1.8e-07 60.1 167 28.1
ECA238G2582 Erigeron canadensis HOM05D005469 ORTHO05D001701 1.8e-07 60.1 166 28.9
THA.LOC104826925 Tarenaya hassleriana HOM05D007206 ORTHO05D009176 1.8e-07 60.1 162 29.6
EL10Ac2g04878 Beta vulgaris HOM05D005469 ORTHO05D001701 2.3e-07 59.7 129 33.3
Cfa001290 Carpinus fangiana HOM05D005469 ORTHO05D001701 4.0e-07 58.9 169 30.2
AT3G09925 Arabidopsis thaliana HOM05D007206 ORTHO05D009176 5.2e-07 58.5 125 31.2
Thhalv10021649m.g Eutrema salsugineum HOM05D007206 ORTHO05D009176 5.2e-07 58.5 125 32.0
HanXRQChr07g0203111 Helianthus annuus HOM05D005469 ORTHO05D001701 5.2e-07 58.5 137 29.9
Atru.chr8.1702 Acer truncatum HOM05D007206 ORTHO05D009176 6.8e-07 58.2 128 29.7
Aqoxy1G01324 Aquilegia oxysepala HOM05D005469 ORTHO05D001701 6.8e-07 58.2 175 30.9
Sabra06G0093700 Salix brachista HOM05D007206 ORTHO05D009176 6.8e-07 58.2 128 30.5
TWI14G0465 Tripterygium wilfordii HOM05D002284 ORTHO05D002427 8.9e-07 57.8 160 31.9
CAN.G1268.13 Capsicum annuum HOM05D005469 ORTHO05D001701 1.2e-06 57.4 169 30.2
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 1.5e-06 57.0 120 33.3
ClCG10G019630 Citrullus lanatus HOM05D007206 ORTHO05D009176 1.5e-06 57.0 129 29.5
Nitab4.5_0000789g0080 Nicotiana tabacum HOM05D005469 ORTHO05D001701 1.5e-06 57.0 137 29.9
COL.COLO4_31456 Corchorus olitorius HOM05D003009 ORTHO05D001701 2.0e-06 56.6 98 32.7
Manes.09G048990 Manihot esculenta HOM05D007206 ORTHO05D009176 2.0e-06 56.6 128 31.2
Potri.006G119100 Populus trichocarpa HOM05D007206 ORTHO05D009176 2.0e-06 56.6 128 29.7
Sopen05g031040 Solanum pennellii HOM05D005469 ORTHO05D001701 2.0e-06 56.6 166 28.9
Sed0006266 Sechium edule HOM05D007206 ORTHO05D009176 2.6e-06 56.2 129 30.2
FvH4_6g17250 Fragaria vesca HOM05D007206 ORTHO05D009176 3.4e-06 55.8 129 28.7
MD07G1225500 Malus domestica HOM05D005469 ORTHO05D001701 3.4e-06 55.8 164 31.7
Solyc05g052500.4 Solanum lycopersicum HOM05D000087 ORTHO05D000793 3.4e-06 55.8 143 29.4
Eucgr.K02418 Eucalyptus grandis HOM05D007206 ORTHO05D009176 4.4e-06 55.5 130 29.2
FAN05G2314 Fragaria x ananassa HOM05D007206 ORTHO05D009176 4.4e-06 55.5 129 28.7
FAN05G5006 Fragaria x ananassa HOM05D007206 ORTHO05D009176 5.8e-06 55.1 129 28.7
SGA_v2.0_scaffold44G16665 Striga asiatica HOM05D005469 ORTHO05D001701 5.8e-06 55.1 160 29.4
Ciclev10033597m.g Citrus clementina HOM05D005469 ORTHO05D001701 7.6e-06 54.7 166 28.3
RcHm_v2.0_Chr3g0471351 Rosa chinensis HOM05D007206 ORTHO05D009176 7.6e-06 54.7 129 28.7
Hund01087 Selenicereus undatus HOM05D007206 ORTHO05D009176 9.9e-06 54.3 128 26.6


User provided reference genes

Program Settings