Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 2.7e-171 605.1 286 100.0
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 6.0e-94 348.2 270 63.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 8.9e-90 334.3 256 64.1
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.2e-89 334.0 284 57.0
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.2e-89 334.0 251 65.3
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.5e-89 333.6 255 62.7
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 3.4e-89 332.4 293 54.9
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 5.8e-89 331.6 268 59.3
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 7.6e-89 331.3 252 63.5
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.3e-88 330.5 283 58.3
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.2e-88 329.7 307 54.4
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 3.8e-88 328.9 251 62.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 4.9e-88 328.6 256 62.5
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 8.4e-88 327.8 283 56.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.1e-87 327.4 256 62.1
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.1e-87 327.4 289 55.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 3.2e-87 325.9 252 60.7
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.2e-86 323.9 253 60.1
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 1.2e-86 323.9 268 58.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.2e-86 323.9 268 57.8
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.6e-86 323.6 284 56.0
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.6e-86 323.6 269 57.6
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.1e-86 323.2 290 56.6
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.1e-86 323.2 294 55.8
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 2.1e-86 323.2 256 59.0
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.5e-86 322.4 261 59.4
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 3.5e-86 322.4 294 54.4
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 6.0e-86 321.6 268 57.8
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 7.8e-86 321.2 259 61.4
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.7e-85 320.1 280 56.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.7e-85 320.1 252 61.1
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.7e-85 320.1 270 57.4
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.3e-85 319.7 268 57.8
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 3.0e-85 319.3 253 58.9
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 3.0e-85 319.3 288 56.2
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 3.0e-85 319.3 253 59.7
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 3.9e-85 318.9 291 55.7
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 5.1e-85 318.5 276 57.2
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 5.1e-85 318.5 252 61.5
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.9e-84 316.6 256 60.5
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 2.5e-84 316.2 282 55.3
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 4.3e-84 315.5 280 54.3
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 7.3e-84 314.7 289 55.4
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 9.6e-84 314.3 252 58.7
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.3e-83 313.9 280 57.9
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.6e-83 313.5 261 59.0
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 2.1e-83 313.2 273 57.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 2.8e-83 312.8 269 57.6
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 3.6e-83 312.4 260 58.1
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 3.6e-83 312.4 253 59.7
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 3.6e-83 312.4 252 60.3
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 6.2e-83 311.6 259 59.8
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.4e-82 310.5 273 56.8
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.4e-82 310.5 262 56.9
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.8e-82 310.1 257 57.2
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 3.1e-82 309.3 301 53.5
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 5.3e-82 308.5 258 57.8
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 6.9e-82 308.1 271 58.7
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.5e-81 307.0 252 57.5
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 2.0e-81 306.6 256 60.2
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 3.4e-81 305.8 288 53.1
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 4.4e-81 305.4 257 56.4
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.8e-81 305.1 253 56.9
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 5.8e-81 305.1 309 51.8
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 2.9e-80 302.8 252 58.7
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 2.9e-80 302.8 252 58.7
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.9e-80 302.8 280 56.1
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 3.8e-80 302.4 257 56.4
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.4e-80 301.2 253 57.7
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 8.4e-80 301.2 253 57.7
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 8.4e-80 301.2 254 57.9
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.1e-79 300.8 254 57.5
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.9e-79 300.1 253 56.9
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.9e-79 300.1 257 57.2
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.2e-78 297.4 281 53.7
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.6e-78 297.0 234 60.3
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 2.1e-78 296.6 252 57.9
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 3.0e-77 292.7 332 47.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 5.6e-76 288.5 272 54.4
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 6.2e-75 285.0 252 56.0
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 1.7e-72 276.9 261 55.6
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.2e-72 276.6 278 49.6
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 4.9e-72 275.4 288 50.7
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 6.7e-69 265.0 266 53.0
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.8e-67 258.8 213 58.7
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 6.2e-67 258.5 337 42.7
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.2e-63 245.7 211 55.9
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.0e-61 241.1 182 63.7
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 5.1e-61 238.8 173 64.2
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.2e-57 227.6 170 63.5
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.4e-57 226.1 192 60.4
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 3.8e-56 222.6 152 69.7
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 5.0e-56 222.2 194 57.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 9.3e-55 218.0 189 57.1
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 4.3e-52 209.1 179 58.7
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 3.2e-47 193.0 266 40.6
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 6.7e-45 185.3 162 56.8
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 3.3e-44 183.0 138 62.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 5.7e-44 182.2 185 49.2
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 5.7e-44 182.2 149 57.0
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.2e-40 170.2 253 40.3
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 6.5e-40 168.7 285 37.5
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 8.2e-35 151.8 308 33.8
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 4.5e-33 146.0 91 69.2
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.9e-31 140.6 114 57.9
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.1e-26 124.8 333 31.8
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 9.1e-26 121.7 134 47.8
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 8.0e-22 108.6 125 44.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.0e-21 108.2 85 61.2
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 1.5e-20 104.4 88 56.8
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.1e-18 98.2 85 54.1
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 3.0e-13 80.1 115 40.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 2.0e-12 77.4 149 33.6
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.8e-11 73.6 61 55.7


User provided reference genes

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