Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 2.8e-126 455.3 227 100.0
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 2.6e-39 166.4 205 46.3
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 3.3e-39 166.0 262 41.6
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.3e-38 164.1 194 50.0
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.7e-38 163.7 205 50.7
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 2.2e-38 163.3 208 47.6
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 8.2e-38 161.4 207 49.3
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.1e-37 161.0 198 49.0
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 3.1e-37 159.5 196 48.5
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 7.0e-37 158.3 206 49.0
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 9.1e-37 157.9 207 48.3
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 2.0e-36 156.8 199 47.7
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 3.5e-36 156.0 218 45.9
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 3.5e-36 156.0 206 48.1
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 4.5e-36 155.6 196 47.4
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 5.9e-36 155.2 205 49.3
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 7.7e-36 154.8 255 38.8
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 1.0e-35 154.5 205 45.4
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 1.3e-35 154.1 205 47.3
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.7e-35 153.7 222 44.1
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 6.5e-35 151.8 207 45.9
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 6.5e-35 151.8 204 47.1
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 8.5e-35 151.4 205 46.3
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 2.5e-34 149.8 195 46.2
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 2.5e-34 149.8 201 47.3
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 5.5e-34 148.7 224 42.9
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 2.1e-33 146.7 198 47.0
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 2.7e-33 146.4 195 46.7
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 2.7e-33 146.4 220 44.5
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 3.6e-33 146.0 207 45.4
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 3.6e-33 146.0 194 46.4
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 3.6e-33 146.0 200 47.0
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 3.6e-33 146.0 207 46.4
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 6.1e-33 145.2 190 48.4
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 6.1e-33 145.2 190 48.4
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 6.1e-33 145.2 228 40.8
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 3.0e-32 142.9 207 45.4
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 5.2e-32 142.1 218 40.8
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 1.2e-31 141.0 200 48.5
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 2.6e-31 139.8 201 45.3
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.6e-31 139.8 200 45.5
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 2.6e-31 139.8 197 46.7
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 3.4e-31 139.4 192 45.8
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 3.4e-31 139.4 198 46.5
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 4.4e-31 139.0 208 46.2
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 4.4e-31 139.0 209 44.5
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 7.5e-31 138.3 204 46.1
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 9.8e-31 137.9 209 45.5
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 2.2e-30 136.7 201 44.3
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 3.7e-30 136.0 196 48.5
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 4.8e-30 135.6 197 45.7
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 6.3e-30 135.2 200 48.0
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 8.3e-30 134.8 203 44.3
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.1e-29 134.4 203 42.4
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 2.4e-29 133.3 201 44.3
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 7.0e-29 131.7 200 44.0
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 9.1e-29 131.3 201 44.3
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.7e-28 129.8 213 42.7
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 3.5e-28 129.4 203 43.8
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 5.9e-28 128.6 205 43.9
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 5.9e-28 128.6 202 45.0
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.3e-27 127.5 263 36.1
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 1.7e-27 127.1 202 45.0
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 3.6e-25 119.4 191 41.9
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 2.3e-24 116.7 233 37.8
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 3.0e-24 116.3 194 38.7
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 3.0e-24 116.3 203 37.4
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 4.0e-24 115.9 193 37.8
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 1.5e-23 114.0 193 37.3
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 2.0e-23 113.6 209 38.3
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 2.6e-23 113.2 193 37.3
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 2.6e-23 113.2 212 40.6
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.7e-22 110.5 211 38.9
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.7e-22 110.5 192 39.6
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 2.2e-22 110.2 206 38.3
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 2.2e-22 110.2 210 39.0
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 2.2e-22 110.2 192 38.5
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 2.8e-22 109.8 207 42.0
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 6.3e-22 108.6 208 41.8
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 6.3e-22 108.6 207 40.1
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 6.3e-22 108.6 208 41.8
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 8.3e-22 108.2 205 40.0
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.1e-21 107.8 194 38.7
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.1e-21 107.8 195 39.0
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.1e-21 107.8 204 40.7
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 1.8e-21 107.1 213 39.4
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 2.4e-21 106.7 194 41.2
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 7.0e-21 105.1 216 33.8
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 2.7e-20 103.2 152 44.1
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 5.9e-20 102.1 206 39.3
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 1.7e-19 100.5 124 44.4
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 3.8e-19 99.4 122 45.1
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.6e-17 92.8 120 45.8
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.7e-17 92.4 120 45.0
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 4.4e-15 85.9 130 42.3
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.1e-13 81.3 156 42.3
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 3.5e-12 76.3 86 55.8
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 3.0e-11 73.2 83 50.6
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 2.5e-10 70.1 204 33.3
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.3e-10 68.6 119 39.5
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 4.4e-07 59.3 79 48.1


User provided reference genes

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