Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO240G0013 Selaginella moellendorffii HOM05D003660 ORTHO05D003415 4.8e-49 197.6 106 100.0
SEGI_04697 Sequoiadendron giganteum HOM05D003660 ORTHO05D003415 1.1e-08 63.5 104 41.3
TAR636G3190 Trochodendron aralioides HOM05D003660 ORTHO05D003415 7.1e-08 60.8 97 44.3
TAR623G0029 Trochodendron aralioides HOM05D003660 ORTHO05D003415 1.2e-07 60.1 99 43.4
SEGI_28618 Sequoiadendron giganteum HOM05D003660 ORTHO05D003415 1.6e-07 59.7 99 40.4
Cc01_g08660 Coffea canephora HOM05D003660 ORTHO05D003415 2.1e-07 59.3 100 40.0
MD03G1151200 Malus domestica HOM05D003660 ORTHO05D003415 2.7e-07 58.9 99 40.4
Glyma.12G186952 Glycine max HOM05D003660 ORTHO05D003415 3.5e-07 58.5 95 40.0
ClCG10G018570 Citrullus lanatus HOM05D003660 ORTHO05D003415 4.6e-07 58.2 99 42.4
Potri.006G206100 Populus trichocarpa HOM05D003660 ORTHO05D003415 4.6e-07 58.2 99 39.4
Atru.chr3.3157 Acer truncatum HOM05D003660 ORTHO05D003415 7.8e-07 57.4 95 38.9
TAR633G2283 Trochodendron aralioides HOM05D003660 ORTHO05D003415 1.0e-06 57.0 97 39.2
CSS0013947 Camellia sinensis var. sinensis HOM05D003660 ORTHO05D003415 1.3e-06 56.6 99 41.4
Phvul.005G121700 Phaseolus vulgaris HOM05D003660 ORTHO05D003415 1.3e-06 56.6 95 37.9
Sed0020241 Sechium edule HOM05D003660 ORTHO05D003415 1.3e-06 56.6 97 43.3
Sc12g0004740 Simmondsia chinensis HOM05D003660 ORTHO05D003415 1.3e-06 56.6 106 35.8
MD11G1171800 Malus domestica HOM05D003660 ORTHO05D003415 1.7e-06 56.2 95 40.0
VMungo1080G1056 Vigna mungo HOM05D003660 ORTHO05D003415 1.7e-06 56.2 95 36.8
Peaxi162Scf00224g00520 Petunia axillaris HOM05D003660 ORTHO05D003415 2.3e-06 55.8 104 38.5
Prupe.6G138900 Prunus persica HOM05D003660 ORTHO05D003415 2.3e-06 55.8 95 37.9
CiPaw.10G014700 Carya illinoinensis HOM05D003660 ORTHO05D003415 3.0e-06 55.5 99 41.4
Ciclev10029624m.g Citrus clementina HOM05D003660 ORTHO05D003415 3.0e-06 55.5 95 35.8
PSO339G2942 Papaver somniferum HOM05D003660 ORTHO05D003415 3.0e-06 55.5 99 40.4
PSO801G0667 Papaver somniferum HOM05D003660 ORTHO05D003415 3.0e-06 55.5 99 40.4
Glyma.13G314500 Glycine max HOM05D003660 ORTHO05D003415 3.9e-06 55.1 95 36.8
Lsat_1_v5_gn_1_57561 Lactuca sativa HOM05D003660 ORTHO05D003415 3.9e-06 55.1 86 44.2
Lalb_Chr14g0376021 Lupinus albus HOM05D003660 ORTHO05D003415 3.9e-06 55.1 95 35.8
Manes.08G030600 Manihot esculenta HOM05D003660 ORTHO05D003415 3.9e-06 55.1 95 40.0
Solyc11g068760.2 Solanum lycopersicum HOM05D003660 ORTHO05D003415 3.9e-06 55.1 106 37.7
Sopen11g027470 Solanum pennellii HOM05D003660 ORTHO05D003415 3.9e-06 55.1 106 37.7
Migut.D02405 Erythranthe guttata HOM05D003660 ORTHO05D003415 5.1e-06 54.7 95 36.8
Potri.004G200200 Populus trichocarpa HOM05D003660 ORTHO05D003415 5.1e-06 54.7 88 40.9
Potri.016G073500 Populus trichocarpa HOM05D003660 ORTHO05D003415 5.1e-06 54.7 95 38.9
Rhsim01G0202600 Rhododendron simsii HOM05D003660 ORTHO05D003415 5.1e-06 54.7 86 40.7
CANSAT64G0684 Cannabis sativa HOM05D003660 ORTHO05D003415 6.6e-06 54.3 99 39.4
Lj3g0015124 Lotus japonicus HOM05D003660 ORTHO05D003415 6.6e-06 54.3 98 36.7
Nn6g34777 Nelumbo nucifera HOM05D003660 ORTHO05D003415 6.6e-06 54.3 86 41.9
RcHm_v2.0_Chr3g0475141 Rosa chinensis HOM05D003660 ORTHO05D003415 6.6e-06 54.3 100 39.0
MSTRG.12378 Avicennia marina HOM05D003660 ORTHO05D003415 8.6e-06 53.9 106 38.7
Cpa.g.sc195.36 Carica papaya HOM05D003660 ORTHO05D003415 8.6e-06 53.9 86 39.5
ECA248G2122 Erigeron canadensis HOM05D003660 ORTHO05D003415 8.6e-06 53.9 86 43.0
SalBow3G1900 Salvia bowleyana HOM05D003660 ORTHO05D003415 8.6e-06 53.9 103 36.9
SGA_v2.0_scaffold7G03991 Striga asiatica HOM05D003660 ORTHO05D003415 8.6e-06 53.9 97 40.2


User provided reference genes

Program Settings