Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 2.7e-277 958.0 469 100.0
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 3.3e-206 721.8 442 83.7
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.1e-142 510.8 333 78.7
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 1.3e-90 337.8 556 36.5
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 2.3e-87 327.0 549 37.9
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 2.4e-84 317.0 521 38.0
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 2.1e-80 303.9 534 37.1
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 1.8e-79 300.8 520 39.2
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 1.8e-79 300.8 545 36.9
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 5.2e-79 299.3 529 36.9
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 2.0e-78 297.4 536 37.9
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 5.8e-78 295.8 530 37.0
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 9.9e-78 295.0 518 37.3
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 1.3e-77 294.7 518 37.1
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 1.7e-77 294.3 544 35.8
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.7e-77 294.3 518 37.1
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 2.2e-77 293.9 545 35.4
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 4.9e-77 292.7 514 38.5
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 8.3e-77 292.0 544 37.5
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 8.3e-77 292.0 551 34.5
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 1.9e-76 290.8 528 36.0
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 3.2e-76 290.0 548 36.9
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 4.1e-76 289.7 544 37.1
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 4.1e-76 289.7 533 36.4
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 4.1e-76 289.7 538 36.1
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 5.4e-76 289.3 533 36.2
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 7.1e-76 288.9 518 36.7
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 7.1e-76 288.9 536 35.8
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 9.2e-76 288.5 537 36.5
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 1.2e-75 288.1 541 34.9
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.6e-75 287.7 544 34.7
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 2.1e-75 287.3 536 34.0
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 2.1e-75 287.3 563 34.1
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 2.1e-75 287.3 533 35.8
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 2.1e-75 287.3 536 35.8
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 2.7e-75 287.0 541 34.9
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 4.6e-75 286.2 532 35.7
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 7.8e-75 285.4 537 34.8
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 1.0e-74 285.0 517 36.0
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 1.3e-74 284.6 541 35.5
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 1.7e-74 284.3 536 36.2
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 3.9e-74 283.1 539 34.0
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 3.9e-74 283.1 512 37.1
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 5.1e-74 282.7 547 36.7
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 6.6e-74 282.3 532 35.5
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 6.6e-74 282.3 534 34.8
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 8.6e-74 282.0 535 35.0
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 1.1e-73 281.6 510 36.5
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 1.5e-73 281.2 535 36.1
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 3.3e-73 280.0 534 35.8
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 4.3e-73 279.6 548 35.9
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 4.3e-73 279.6 518 36.1
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 5.6e-73 279.3 513 34.1
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 5.6e-73 279.3 519 36.6
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 1.2e-72 278.1 463 38.9
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 1.2e-72 278.1 535 35.0
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 1.2e-72 278.1 538 33.3
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 1.6e-72 277.7 549 36.4
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 2.1e-72 277.3 546 35.3
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 4.7e-72 276.2 520 36.7
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 4.7e-72 276.2 533 36.8
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 4.7e-72 276.2 532 36.1
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 1.1e-71 275.0 538 34.8
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 2.4e-71 273.9 546 36.3
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 5.2e-71 272.7 538 33.3
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 5.2e-71 272.7 527 33.8
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 5.2e-71 272.7 534 35.2
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 6.8e-71 272.3 543 37.0
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 8.9e-71 271.9 537 33.0
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 1.2e-70 271.6 538 33.3
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 3.4e-70 270.0 514 34.6
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 3.4e-70 270.0 515 35.7
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 5.8e-70 269.2 514 34.4
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 3.8e-69 266.5 543 33.5
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 4.9e-69 266.2 543 32.6
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 4.9e-69 266.2 559 32.9
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 6.4e-69 265.8 534 34.3
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 8.4e-69 265.4 511 34.1
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 1.9e-68 264.2 531 34.7
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 9.3e-68 261.9 534 34.8
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 1.6e-67 261.2 540 33.9
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.6e-67 261.2 460 37.2
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 6.0e-67 259.2 547 35.5
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 7.8e-67 258.8 536 33.0
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 5.1e-66 256.1 516 34.5
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 8.7e-66 255.4 519 35.8
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 1.5e-65 254.6 531 33.3
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 5.6e-65 252.7 557 32.9
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 2.4e-63 247.3 494 34.8
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 9.0e-63 245.4 609 30.2
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 2.6e-62 243.8 586 33.1
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 8.4e-61 238.8 420 38.3
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 2.4e-60 237.3 458 35.2
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 2.3e-58 230.7 418 35.2
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 9.9e-54 215.3 456 33.6
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 3.8e-53 213.4 465 34.8
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 4.9e-53 213.0 528 30.7
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 1.9e-52 211.1 493 32.9
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 7.9e-51 205.7 346 37.3
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 9.3e-44 182.2 198 46.0
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 3.5e-43 180.3 464 30.4
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 6.0e-43 179.5 505 30.3
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 1.9e-28 131.3 398 28.6
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 1.2e-27 128.6 285 33.0
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 4.5e-22 110.2 89 59.6
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 9.1e-15 85.9 95 51.6
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 2.0e-14 84.7 83 50.6
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 2.0e-09 68.2 100 38.0


User provided reference genes

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