Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO239G0133 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 1.6e-109 399.4 201 100.0
SMO239G0160 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 2.7e-77 292.4 215 76.7
SMO239G0139 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 1.0e-71 273.9 218 71.6
Nitab4.5_0005721g0040 Nicotiana tabacum HOM05D000811 ORTHO05D007840 1.4e-36 157.1 200 47.0
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 4.0e-36 155.6 217 45.6
Nn5g29276 Nelumbo nucifera HOM05D000811 ORTHO05D007840 4.0e-36 155.6 199 45.7
Hund14040 Selenicereus undatus HOM05D000811 ORTHO05D007840 4.0e-36 155.6 217 44.2
Mapoly0044s0097 Marchantia polymorpha HOM05D000811 ORTHO05D007840 1.2e-35 154.1 222 43.2
CAN.G1671.2 Capsicum annuum HOM05D000811 ORTHO05D007840 2.6e-35 152.9 213 45.1
CiPaw.07G057400 Carya illinoinensis HOM05D000811 ORTHO05D007840 2.6e-35 152.9 217 45.6
Sopen02g028830 Solanum pennellii HOM05D000811 ORTHO05D007840 2.6e-35 152.9 215 45.1
Solyc02g084030.3 Solanum lycopersicum HOM05D000811 ORTHO05D007840 3.4e-35 152.5 215 45.1
QL06p033557 Quercus lobata HOM05D000811 ORTHO05D007840 7.5e-35 151.4 211 45.5
CAN.G724.41 Capsicum annuum HOM05D000811 ORTHO05D007840 3.7e-34 149.1 217 43.8
ClCG01G020180 Citrullus lanatus HOM05D000811 ORTHO05D007840 4.9e-34 148.7 217 43.8
Hma1.2p1_2281F.1_g318770 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 4.9e-34 148.7 213 44.6
Haze_03790 Corylus avellana HOM05D000811 ORTHO05D007840 6.4e-34 148.3 236 42.4
Lj2A466G44 Lonicera japonica HOM05D000811 ORTHO05D007840 6.4e-34 148.3 211 44.1
Lj2A474G39 Lonicera japonica HOM05D000811 ORTHO05D007840 6.4e-34 148.3 211 44.1
Peaxi162Scf00083g00821 Petunia axillaris HOM05D000811 ORTHO05D007840 6.4e-34 148.3 211 44.5
Manes.02G103100 Manihot esculenta HOM05D000811 ORTHO05D007840 8.3e-34 147.9 217 43.3
SGA_v2.0_scaffold137G35079 Striga asiatica HOM05D000811 ORTHO05D007840 1.1e-33 147.5 211 42.7
vmacro18419 Vaccinium macrocarpon HOM05D000811 ORTHO05D007840 1.1e-33 147.5 217 42.9
TAR625G1510 Trochodendron aralioides HOM05D000811 ORTHO05D007840 1.4e-33 147.1 219 42.9
Prupe.1G202800 Prunus persica HOM05D000811 ORTHO05D007840 1.9e-33 146.7 217 45.2
CsaV3_6G046980 Cucumis sativus L. HOM05D000811 ORTHO05D007840 3.2e-33 146.0 203 44.8
ECA232G2345 Erigeron canadensis HOM05D000811 ORTHO05D007840 3.2e-33 146.0 210 44.3
HanXRQChr15g0487231 Helianthus annuus HOM05D000811 ORTHO05D007840 3.2e-33 146.0 209 44.5
Potri.007G012900 Populus trichocarpa HOM05D000811 ORTHO05D007840 3.2e-33 146.0 212 43.9
Thecc.01G020800 Theobroma cacao HOM05D000811 ORTHO05D007840 3.2e-33 146.0 218 43.1
AL3G51180 Arabidopsis lyrata HOM05D000811 ORTHO05D007840 4.1e-33 145.6 205 43.4
THA.LOC104807489 Tarenaya hassleriana HOM05D000811 ORTHO05D007840 4.1e-33 145.6 209 43.5
HPP92_025838 Vanilla planifolia HOM05D000811 ORTHO05D007840 4.1e-33 145.6 211 43.1
BolC9t54263H Brassica oleracea HOM05D000811 ORTHO05D007840 5.4e-33 145.2 213 43.7
BraA09t36813Z Brassica rapa HOM05D000811 ORTHO05D007840 5.4e-33 145.2 213 43.7
CARHR108520 Cardamine hirsuta HOM05D000811 ORTHO05D007840 5.4e-33 145.2 205 43.4
COL.COLO4_21928 Corchorus olitorius HOM05D000811 ORTHO05D007840 5.4e-33 145.2 214 43.5
FvH4_6g24560 Fragaria vesca HOM05D000811 ORTHO05D007840 5.4e-33 145.2 209 45.0
FAN14G3764 Fragaria x ananassa HOM05D000811 ORTHO05D007840 5.4e-33 145.2 209 45.0
Migut.H01151 Erythranthe guttata HOM05D000811 ORTHO05D007840 7.1e-33 144.8 211 44.1
BcaB07g31695 Brassica carinata HOM05D000811 ORTHO05D007840 9.2e-33 144.4 205 43.4
BcaC04g22934 Brassica carinata HOM05D000811 ORTHO05D007840 9.2e-33 144.4 213 43.2
C09p13720 Brassica napus HOM05D000811 ORTHO05D007840 9.2e-33 144.4 213 43.2
Lsat_1_v5_gn_4_146761 Lactuca sativa HOM05D000811 ORTHO05D007840 9.2e-33 144.4 217 42.9
RcHm_v2.0_Chr3g0483661 Rosa chinensis HOM05D000811 ORTHO05D007840 9.2e-33 144.4 217 43.8
Sp3g31460 Schrenkiella parvula HOM05D000811 ORTHO05D007840 9.2e-33 144.4 210 43.3
CSS0011847 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 1.2e-32 144.1 217 44.7
Duzib147G1611 Durio zibethinus HOM05D000811 ORTHO05D007840 1.6e-32 143.7 218 43.1
Gohir.D12G060200 Gossypium hirsutum HOM05D000811 ORTHO05D007840 1.6e-32 143.7 214 43.9
Gorai.008G063300 Gossypium raimondii HOM05D000811 ORTHO05D007840 1.6e-32 143.7 214 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1381 Anthoceros agrestis HOM05D000811 ORTHO05D007840 2.1e-32 143.3 226 40.7
MSTRG.2702 Avicennia marina HOM05D000811 ORTHO05D007840 2.1e-32 143.3 211 43.1
PSO541G4766 Papaver somniferum HOM05D000811 ORTHO05D007840 2.1e-32 143.3 214 42.5
PGR119G1393 Punica granatum HOM05D000811 ORTHO05D007840 2.7e-32 142.9 209 43.5
RcHm_v2.0_Chr3g0483821 Rosa chinensis HOM05D000811 ORTHO05D007840 2.7e-32 142.9 217 43.8
TWI09G0870 Tripterygium wilfordii HOM05D000811 ORTHO05D007840 2.7e-32 142.9 211 43.6
Zm00001eb377760 Zea mays HOM05D000811 ORTHO05D007840 2.7e-32 142.9 207 44.0
A09p11680 Brassica napus HOM05D000811 ORTHO05D007840 3.5e-32 142.5 213 43.2
AUR62043612 Chenopodium quinoa HOM05D000811 ORTHO05D007840 3.5e-32 142.5 216 41.7
AUR62044454 Chenopodium quinoa HOM05D000811 ORTHO05D007840 3.5e-32 142.5 216 41.7
MELO3C007891.2 Cucumis melo HOM05D000811 ORTHO05D007840 3.5e-32 142.5 203 44.3
Medtr8g076060 Medicago truncatula HOM05D000811 ORTHO05D007840 3.5e-32 142.5 209 42.6
Sc16g0002060 Simmondsia chinensis HOM05D000811 ORTHO05D007840 3.5e-32 142.5 212 42.0
VMungo0251G2049 Vigna mungo HOM05D000811 ORTHO05D007840 3.5e-32 142.5 213 41.8
Cpa.g.sc6.232 Carica papaya HOM05D000811 ORTHO05D007840 4.6e-32 142.1 213 43.2
Ciclev10026355m.g Citrus clementina HOM05D000811 ORTHO05D007840 4.6e-32 142.1 217 43.3
Lj4g0023417 Lotus japonicus HOM05D000811 ORTHO05D007840 4.6e-32 142.1 215 43.3
Os06g0138100 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D007840 4.6e-32 142.1 212 43.4
PSO675G0258 Papaver somniferum HOM05D000811 ORTHO05D007840 4.6e-32 142.1 214 43.0
Duzib264G0346 Durio zibethinus HOM05D000811 ORTHO05D007840 6.0e-32 141.7 209 42.1
Thhalv10022823m.g Eutrema salsugineum HOM05D000811 ORTHO05D007840 6.0e-32 141.7 205 42.0
Glyma.02G049400 Glycine max HOM05D000811 ORTHO05D007840 6.0e-32 141.7 212 42.5
AT2G18030 Arabidopsis thaliana HOM05D000811 ORTHO05D007840 7.8e-32 141.4 205 42.4
Glyma.16G129800 Glycine max HOM05D000811 ORTHO05D007840 7.8e-32 141.4 213 42.3
Lalb_Chr05g0229871 Lupinus albus HOM05D000811 ORTHO05D007840 7.8e-32 141.4 215 42.3
Ca_22370_v3 Cicer arietinum L. HOM05D000811 ORTHO05D007840 1.0e-31 141.0 215 42.3
TPR.G30060 Trifolium pratense HOM05D000811 ORTHO05D007840 1.0e-31 141.0 211 42.7
SalBow3G3717 Salvia bowleyana HOM05D000811 ORTHO05D007840 1.3e-31 140.6 218 40.4
Sed0020033 Sechium edule HOM05D000811 ORTHO05D007840 1.3e-31 140.6 217 42.4
Aa31LG8G15210 Aethionema arabicum HOM05D000811 ORTHO05D007840 2.3e-31 139.8 201 41.8
PGSC0003DMG400003634 Solanum tuberosum HOM05D000811 ORTHO05D007840 2.3e-31 139.8 238 39.9
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 3.9e-31 139.0 225 40.9
Atru.chr3.786 Acer truncatum HOM05D000811 ORTHO05D007840 5.1e-31 138.7 217 41.9
Carub.0003s3218 Capsella rubella HOM05D000811 ORTHO05D007840 5.1e-31 138.7 209 42.1
Psat4g098520 Pisum sativum HOM05D000811 ORTHO05D007840 1.1e-30 137.5 215 42.3
Lalb_Chr16g0391201 Lupinus albus HOM05D000811 ORTHO05D007840 1.5e-30 137.1 217 40.6
Eucgr.J02409 Eucalyptus grandis HOM05D000811 ORTHO05D007840 1.9e-30 136.7 217 41.0
Phvul.003G260900 Phaseolus vulgaris HOM05D000811 ORTHO05D007840 2.5e-30 136.3 214 41.1
ATR0147G018 Amborella trichopoda HOM05D000811 ORTHO05D007840 3.3e-30 136.0 213 41.8
DCAR_021499 Daucus carota HOM05D000811 ORTHO05D007840 5.6e-30 135.2 236 39.8
GSVIVG01018799001 Vitis vinifera HOM05D000811 ORTHO05D007840 5.6e-30 135.2 217 41.5
CDE08G1305 Ceratophyllum demersum HOM05D000811 ORTHO05D007840 7.3e-30 134.8 211 39.8
arahy.Tifrunner.gnm1.ann1.IAHM14 Arachis hypogaea HOM05D000811 ORTHO05D007840 1.2e-29 134.0 213 39.9
Eucgr.J02417 Eucalyptus grandis HOM05D000811 ORTHO05D007840 1.6e-29 133.7 231 38.5
arahy.Tifrunner.gnm1.ann1.JKZZ7D Arachis hypogaea HOM05D000811 ORTHO05D007840 3.6e-29 132.5 213 39.4
FAN09G1557 Fragaria x ananassa HOM05D000811 ORTHO05D007840 4.7e-29 132.1 243 39.1
CBR_g40417 Chara braunii HOM05D000811 ORTHO05D007840 2.4e-28 129.8 200 42.0
Pp3c19_10080 Physcomitrium patens HOM05D000811 ORTHO05D007840 4.0e-28 129.0 223 37.2
Dinv40075 Davidia involucrata HOM05D000811 ORTHO05D007840 2.4e-25 119.8 168 47.0
FAN02G1033 Fragaria x ananassa HOM05D000811 ORTHO05D007840 3.2e-25 119.4 164 49.4
Sabra07G0009900 Salix brachista HOM05D000811 ORTHO05D007840 4.2e-25 119.0 161 47.8
Gohir.A12G060100 Gossypium hirsutum HOM05D000811 ORTHO05D007840 1.2e-24 117.5 162 48.1
Ah.02g124470 Amaranthus hybridus HOM05D000811 ORTHO05D007840 2.1e-24 116.7 155 49.0
Nitab4.5_0004254g0050 Nicotiana tabacum HOM05D000811 ORTHO05D007840 6.0e-24 115.2 157 47.8
RcHm_v2.0_Chr0c32g0501631 Rosa chinensis HOM05D000811 ORTHO05D007840 7.8e-24 114.8 162 46.9
RcHm_v2.0_Chr0c32g0501451 Rosa chinensis HOM05D000811 ORTHO05D007840 1.0e-23 114.4 186 42.5
CBR_g40629 Chara braunii HOM05D000811 ORTHO05D007840 4.3e-22 109.0 220 35.0
EL10As8g23838 Beta vulgaris HOM05D001533 ORTHO05D003743 5.3e-20 102.1 132 44.7
SEGI_08967 Sequoiadendron giganteum HOM05D000811 ORTHO05D007840 9.0e-20 101.3 133 45.9
unitig_37.g12157 Utricularia gibba HOM05D000811 ORTHO05D007840 1.2e-19 100.9 188 36.7
Cc07_g10620 Coffea canephora HOM05D000811 ORTHO05D007840 9.3e-17 91.3 132 41.7
Cc00_g30270 Coffea canephora HOM05D000811 ORTHO05D007840 1.6e-16 90.5 132 41.7
Cc00_g33000 Coffea canephora HOM05D000811 ORTHO05D007840 1.6e-16 90.5 132 41.7
Actinidia22988 Actinidia chinensis HOM05D000811 ORTHO05D007840 2.1e-16 90.1 165 40.6
CSS0003821 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 2.1e-16 90.1 132 41.7
Lsat_1_v5_gn_4_146701 Lactuca sativa HOM05D000811 ORTHO05D007840 3.0e-15 86.3 124 39.5
FAN05G3534 Fragaria x ananassa HOM05D000811 ORTHO05D007840 8.7e-15 84.7 99 52.5
Cc00_g34170 Coffea canephora HOM05D000811 ORTHO05D007840 4.0e-12 75.9 115 41.7
CSS0008295 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 2.2e-10 70.1 51 64.7
Eucgr.J02411 Eucalyptus grandis HOM05D000811 ORTHO05D007840 2.2e-10 70.1 111 43.2
Cc00_g23380 Coffea canephora HOM05D000811 ORTHO05D007840 4.9e-10 68.9 49 65.3
SMO116G0393 Selaginella moellendorffii HOM05D000811 ORTHO05D001558 6.4e-10 68.6 168 35.7
Oeu062503.1 Olea europaea HOM05D000811 ORTHO05D007840 1.1e-09 67.8 59 54.2
Hma1.2p1_0743F.1_g211546 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 4.2e-09 65.9 50 62.0
Hma1.2p1_2281F.1_g318780 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 4.2e-09 65.9 50 62.0
Cc07_g21120 Coffea canephora HOM05D000811 ORTHO05D007840 5.4e-09 65.5 49 61.2
Haze_26512 Corylus avellana HOM05D000811 ORTHO05D001558 8.7e-07 58.2 197 29.9


User provided reference genes

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