Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 0.0e+00 3632.8 1900 100.0
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 0.0e+00 1771.5 1978 51.0
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 0.0e+00 1770.0 1991 51.3
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 0.0e+00 1564.3 2006 46.8
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 0.0e+00 1316.2 2015 42.0
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 0.0e+00 1315.8 2038 41.9
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 0.0e+00 1300.0 2038 39.8
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 0.0e+00 1293.9 2014 41.1
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 0.0e+00 1291.2 2042 40.3
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 0.0e+00 1291.2 2057 41.0
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 0.0e+00 1288.1 2043 40.5
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 0.0e+00 1286.6 2019 41.0
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 0.0e+00 1284.6 2053 40.4
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 0.0e+00 1283.9 2050 40.0
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 0.0e+00 1280.8 2041 40.2
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 0.0e+00 1280.4 2010 40.9
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 0.0e+00 1277.3 2046 40.1
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 0.0e+00 1276.5 1994 41.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 0.0e+00 1276.2 1986 41.1
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 0.0e+00 1275.8 2041 40.8
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 0.0e+00 1275.0 2040 40.1
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 0.0e+00 1271.5 2051 39.7
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 0.0e+00 1269.6 2019 40.9
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 0.0e+00 1269.6 2003 40.6
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 0.0e+00 1269.6 2010 40.6
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 0.0e+00 1266.9 1921 41.7
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 0.0e+00 1266.9 2033 40.8
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 0.0e+00 1265.0 1987 40.5
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 0.0e+00 1263.1 2010 40.5
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 0.0e+00 1261.1 1633 45.3
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 0.0e+00 1261.1 2001 40.1
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 0.0e+00 1257.7 2017 39.5
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 0.0e+00 1256.9 2030 41.3
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 0.0e+00 1253.8 2046 39.5
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 0.0e+00 1253.0 2020 39.5
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 0.0e+00 1252.7 2038 39.6
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 0.0e+00 1249.6 2037 39.8
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 0.0e+00 1247.3 1987 39.5
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 0.0e+00 1247.3 2026 40.2
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 0.0e+00 1245.7 2008 40.5
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 0.0e+00 1245.3 2015 40.6
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 0.0e+00 1245.0 2011 39.5
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 0.0e+00 1242.6 2008 39.4
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 0.0e+00 1236.5 2010 39.9
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 0.0e+00 1233.8 2004 40.3
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 0.0e+00 1233.4 2023 40.0
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 0.0e+00 1233.0 1967 40.4
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 0.0e+00 1232.6 1998 40.0
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 0.0e+00 1232.2 1998 39.8
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 0.0e+00 1231.9 1979 40.0
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 0.0e+00 1231.5 1979 40.5
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 0.0e+00 1231.1 1450 48.2
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 0.0e+00 1229.5 2004 39.8
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 0.0e+00 1228.8 2011 39.9
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 0.0e+00 1226.8 2015 40.1
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 0.0e+00 1223.0 2004 40.0
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 0.0e+00 1216.8 2009 39.8
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 0.0e+00 1213.4 2000 39.8
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 0.0e+00 1208.7 1999 39.7
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 0.0e+00 1205.7 2093 38.1
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 0.0e+00 1204.1 1996 39.5
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 0.0e+00 1200.3 2111 38.5
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 0.0e+00 1194.9 2036 38.8
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 0.0e+00 1186.8 2054 38.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 0.0e+00 1186.8 2054 38.7
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 0.0e+00 1177.9 2029 38.6
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 0.0e+00 1166.8 2033 37.5
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 0.0e+00 1159.4 2061 37.7
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 0.0e+00 1154.4 1995 37.9
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 0.0e+00 1153.3 1984 38.1
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 0.0e+00 1147.5 2214 36.3
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 0.0e+00 1126.7 1963 38.2
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 0.0e+00 1105.5 2319 35.1
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 0.0e+00 1104.7 1979 38.1
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 0.0e+00 1097.8 1539 43.1
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 0.0e+00 1090.9 1879 38.5
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 0.0e+00 1086.2 2206 35.5
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 0.0e+00 1082.8 1997 37.3
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 0.0e+00 1075.8 2030 36.7
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 4.9e-309 1065.4 1979 37.1
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 3.9e-282 976.1 1681 38.2
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 5.8e-278 962.2 1121 48.5
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 7.4e-273 945.3 1944 34.3
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.2e-251 874.8 1359 40.5
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 7.4e-241 839.0 1626 36.2
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 1.0e-237 828.6 1526 37.0
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 5.7e-233 812.8 1585 36.0
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 3.6e-227 793.5 1458 37.2
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 6.8e-210 736.1 1027 41.5
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 2.8e-203 714.1 895 46.8
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 1.6e-190 671.8 813 46.7
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 8.6e-189 666.0 832 45.1
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 6.2e-179 633.3 846 42.9
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 2.6e-145 521.5 1305 32.6
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 2.1e-142 511.9 671 43.5
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 3.6e-134 484.6 680 43.5
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 2.2e-128 465.3 405 61.0
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 2.0e-113 415.6 554 45.1
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.1e-106 391.3 434 52.1
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 1.6e-102 379.4 442 47.7
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 8.6e-96 357.1 885 31.3
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 6.1e-94 350.9 378 51.3
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.1e-90 340.1 375 50.7
SEGI_32880 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.8e-90 339.3 750 34.1
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 3.5e-89 335.1 887 31.2
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 3.5e-89 335.1 435 45.7
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 1.3e-88 333.2 1540 27.2
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 2.3e-80 305.8 290 53.8
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 6.6e-80 304.3 835 30.3
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 3.7e-75 288.5 790 30.6
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 7.1e-74 284.3 1869 22.7
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 5.8e-68 264.6 294 49.7
FAN09G0938 Fragaria x ananassa HOM05D003845 ORTHO05D004161 3.5e-65 255.4 265 50.2
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 1.5e-60 240.0 274 44.5
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 4.8e-54 218.4 361 40.4
DCAR_017205 Daucus carota HOM05D003845 ORTHO05D004161 1.8e-53 216.5 756 27.9
Cpa.g.sc179.5 Carica papaya HOM05D003845 ORTHO05D004161 2.2e-51 209.5 762 27.3
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 3.5e-41 175.6 301 41.2
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 7.9e-41 174.5 163 56.4
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 5.1e-40 171.8 279 41.2
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 1.0e-35 157.5 401 30.4
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 7.9e-33 147.9 132 54.5
Lsat_1_v5_gn_5_95120 Lactuca sativa HOM05D000020 ORTHO05D000543 3.3e-31 142.5 196 42.3
Lsat_1_v5_gn_3_65920 Lactuca sativa HOM05D003845 ORTHO05D004161 5.7e-31 141.7 159 49.1
Lsat_1_v5_gn_4_179241 Lactuca sativa HOM05D003845 ORTHO05D004161 5.7e-31 141.7 159 49.1
Lsat_1_v5_gn_8_43240 Lactuca sativa HOM05D003845 ORTHO05D004161 5.7e-31 141.7 159 49.1
Cfa024622 Carpinus fangiana HOM05D003845 ORTHO05D004161 7.4e-31 141.4 620 22.7
Ca_04078_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 7.6e-28 131.3 141 50.4
Lsat_1_v5_gn_5_70501 Lactuca sativa HOM05D003845 ORTHO05D004161 2.9e-27 129.4 122 56.6
COL.COLO4_05467 Corchorus olitorius HOM05D003845 ORTHO05D004161 9.3e-26 124.4 230 36.5
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 1.2e-25 124.0 115 58.3
CSS0008855 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 5.1e-24 118.6 171 43.3
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 4.8e-22 112.1 125 51.2
Glyma.08G364200 Glycine max HOM05D003845 ORTHO05D004161 1.3e-19 104.0 462 24.9
MCO14G535 Micromonas commoda HOM05D003845 ORTHO05D004161 9.4e-18 97.8 619 23.4
Cpa.g.sc179.6 Carica papaya HOM05D003845 ORTHO05D004161 6.1e-17 95.1 132 41.7
Pp3c9_4980 Physcomitrium patens HOM05D003845 ORTHO05D004161 6.7e-16 91.7 117 45.3
Mapoly0010s0133 Marchantia polymorpha HOM05D003845 ORTHO05D004161 1.4e-13 84.0 109 45.0
Lsat_1_v5_gn_8_163720 Lactuca sativa HOM05D003845 ORTHO05D004161 3.4e-12 79.3 101 42.6
CiPaw.04G041000 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.1e-10 74.3 230 33.0
Manes.07G074028 Manihot esculenta HOM05D003845 ORTHO05D004161 1.4e-10 73.9 74 43.2
Cpa.g.sc179.7 Carica papaya HOM05D003845 ORTHO05D004161 4.2e-10 72.4 57 63.2
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 2.3e-08 66.6 57 57.9
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 2.3e-08 66.6 55 52.7
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 3.0e-08 66.2 56 57.1
EL10Ac8g19727 Beta vulgaris HOM05D003845 ORTHO05D004161 5.1e-08 65.5 54 55.6
CSS0031203 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 6.7e-08 65.1 85 41.2
Cpa.g.sc3785.2 Carica papaya HOM05D003845 ORTHO05D004161 3.3e-07 62.8 67 40.3
Lj6g0007936 Lotus japonicus HOM05D003845 ORTHO05D004161 4.4e-07 62.4 172 33.7


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