Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.0e-269 931.4 517 100.0
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.0e-269 931.4 517 100.0
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.2e-233 813.1 517 90.1
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 9.0e-149 531.2 383 69.5
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 7.4e-143 511.5 366 68.3
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.7e-142 509.2 353 70.3
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 2.7e-137 493.0 347 68.6
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 5.1e-136 488.8 347 68.9
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 5.1e-136 488.8 358 69.0
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 6.7e-136 488.4 383 65.3
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 2.5e-135 486.5 347 68.3
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.5e-135 486.5 364 65.1
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 7.4e-135 485.0 346 67.9
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 7.4e-135 485.0 347 68.6
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 9.7e-135 484.6 386 62.7
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.7e-135 484.6 393 61.8
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 2.2e-134 483.4 375 65.3
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.2e-134 483.4 364 66.8
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 2.2e-134 483.4 375 65.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 3.7e-134 482.6 367 65.7
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.3e-134 481.9 351 68.1
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.1e-133 481.1 396 61.1
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.4e-133 480.7 353 66.3
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.4e-133 480.7 347 66.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.8e-133 480.3 364 65.7
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.8e-133 480.3 359 66.3
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 4.1e-133 479.2 349 67.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 5.3e-133 478.8 354 66.7
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 5.3e-133 478.8 373 65.7
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 5.3e-133 478.8 350 67.1
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 6.9e-133 478.4 365 65.5
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 9.1e-133 478.0 349 67.6
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.5e-132 477.2 347 66.3
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.0e-132 476.9 383 63.2
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.0e-132 476.9 373 63.5
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 2.6e-132 476.5 354 66.4
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.5e-132 475.7 375 64.3
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 7.7e-132 474.9 371 63.6
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 7.7e-132 474.9 391 62.4
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.0e-131 474.6 362 66.0
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 2.2e-131 473.4 341 67.4
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.8e-131 472.6 348 68.4
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 3.8e-131 472.6 349 66.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 5.0e-131 472.2 342 69.3
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 5.0e-131 472.2 376 63.3
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.5e-131 471.9 351 65.5
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.4e-130 470.7 349 66.2
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.4e-130 470.7 349 66.2
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.9e-130 470.3 384 62.0
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.9e-130 470.3 358 65.6
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 2.5e-130 469.9 345 67.0
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.5e-130 469.9 347 66.9
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 2.5e-130 469.9 346 67.6
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 2.5e-130 469.9 361 64.8
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 4.2e-130 469.2 347 66.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 5.5e-130 468.8 347 67.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 9.4e-130 468.0 382 64.4
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.6e-129 467.2 377 62.9
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.6e-129 467.2 361 64.5
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.1e-129 466.8 375 62.1
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 2.7e-129 466.5 375 62.4
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 3.6e-129 466.1 361 64.3
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 3.0e-128 463.0 382 62.3
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 3.9e-128 462.6 370 63.0
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 5.1e-128 462.2 388 60.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 2.0e-127 460.3 396 60.1
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 3.3e-127 459.5 369 65.9
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 2.8e-126 456.4 375 62.4
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.8e-126 456.4 372 62.4
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.1e-121 440.3 384 59.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 4.7e-121 439.1 338 65.7
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 6.3e-118 428.7 349 63.6
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 8.5e-115 418.3 398 57.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.2e-113 414.5 352 61.1
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 5.2e-104 382.5 368 54.3
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.4e-103 379.8 385 55.1
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 7.7e-100 368.6 300 63.7
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 4.7e-97 359.4 284 66.2
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 1.6e-89 334.3 232 70.7
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 2.8e-89 333.6 267 63.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.8e-88 330.9 238 68.1
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.0e-83 313.5 372 50.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.1e-82 311.6 270 58.1
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 1.9e-77 294.3 273 57.5
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.4e-69 268.1 209 63.2
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 4.6e-68 263.1 174 71.3
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 2.1e-52 211.1 183 59.6
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 8.4e-46 189.1 145 64.8
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.6e-34 149.8 121 57.9
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.4e-32 145.2 118 57.6
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.2e-07 62.4 77 45.5


User provided reference genes

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