Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO234G0060 Selaginella moellendorffii HOM05D000022 ORTHO05D374481 1.7e-194 682.6 353 100.0
SMO196G0144 Selaginella moellendorffii HOM05D000655 ORTHO05D001166 3.0e-10 70.5 231 29.4
BolC6t39512H Brassica oleracea HOM05D000022 ORTHO05D000744 6.6e-10 69.3 252 27.0
SEGI_05914 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 6.6e-10 69.3 221 26.2
SEGI_08792 Sequoiadendron giganteum HOM05D000054 ORTHO05D004590 8.7e-10 68.9 220 26.4
PSO675G1079 Papaver somniferum HOM05D000022 ORTHO05D000071 1.9e-09 67.8 233 26.2
SMO196G0227 Selaginella moellendorffii HOM05D000054 ORTHO05D014621 2.5e-09 67.4 70 61.4
VMungo1215G2424 Vigna mungo HOM05D000022 ORTHO05D000071 3.3e-09 67.0 214 27.6
BcaC08g46501 Brassica carinata HOM05D000022 ORTHO05D000744 4.3e-09 66.6 252 26.6
SMO258G0001 Selaginella moellendorffii HOM05D000054 ORTHO05D013008 5.6e-09 66.2 46 76.1
CiPaw.09G084700 Carya illinoinensis HOM05D000022 ORTHO05D000071 9.6e-09 65.5 202 24.3
C06p44500 Brassica napus HOM05D000022 ORTHO05D000744 1.2e-08 65.1 252 26.2
Lj1g0001983 Lotus japonicus HOM05D000022 ORTHO05D000071 1.2e-08 65.1 197 25.4
Aa31LG4G10420 Aethionema arabicum HOM05D000022 ORTHO05D000744 1.6e-08 64.7 239 26.8
CiPaw.09G085500 Carya illinoinensis HOM05D000022 ORTHO05D000071 1.6e-08 64.7 201 24.9
Lj5g0015336 Lotus japonicus HOM05D000022 ORTHO05D000071 1.6e-08 64.7 200 27.5
SEGI_01584 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.6e-08 64.7 217 23.5
TWI36G0873 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 2.8e-08 63.9 205 29.8
SEGI_03650 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 3.6e-08 63.5 219 24.7
SEGI_40091 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 3.6e-08 63.5 215 23.3
A07p36950 Brassica napus HOM05D000022 ORTHO05D000744 4.7e-08 63.2 252 26.6
BraA07t31258Z Brassica rapa HOM05D000022 ORTHO05D000744 4.7e-08 63.2 252 26.6
Thhalv10018252m.g Eutrema salsugineum HOM05D000022 ORTHO05D000744 4.7e-08 63.2 235 26.0
Prupe.6G140300 Prunus persica HOM05D000022 ORTHO05D000071 4.7e-08 63.2 227 25.1
SGA_v2.0_scaffold481G52327 Striga asiatica HOM05D000022 ORTHO05D000744 4.7e-08 63.2 229 24.9
TWI38G0353 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 4.7e-08 63.2 207 26.1
SEGI_18360 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 6.2e-08 62.8 206 22.3
TWI38G1685 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 6.2e-08 62.8 238 26.9
Eucgr.D00829 Eucalyptus grandis HOM05D000022 ORTHO05D000071 8.1e-08 62.4 229 26.2
EL10As6g23666 Beta vulgaris HOM05D000022 ORTHO05D000071 1.1e-07 62.0 217 27.2
Nn1g03701 Nelumbo nucifera HOM05D000022 ORTHO05D000071 1.1e-07 62.0 196 28.6
TWI31G0782 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 1.1e-07 62.0 208 28.4
TWI38G1041 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 1.1e-07 62.0 238 24.8
CAN.G206.1 Capsicum annuum HOM05D000022 ORTHO05D000744 1.4e-07 61.6 195 26.2
AUR62012564 Chenopodium quinoa HOM05D000022 ORTHO05D000071 1.4e-07 61.6 200 28.0
Sp5g25640 Schrenkiella parvula HOM05D000022 ORTHO05D000744 1.4e-07 61.6 254 24.8
TWI63G1150 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 1.4e-07 61.6 258 28.7
Nn1g06972 Nelumbo nucifera HOM05D000022 ORTHO05D000071 1.8e-07 61.2 237 26.6
Sc17g0007040 Simmondsia chinensis HOM05D000022 ORTHO05D000071 1.8e-07 61.2 188 25.5
CiPaw.09G086200 Carya illinoinensis HOM05D000022 ORTHO05D000071 2.4e-07 60.8 201 24.9
Phvul.007G050600 Phaseolus vulgaris HOM05D000022 ORTHO05D000071 2.4e-07 60.8 198 27.8
QL05p075476 Quercus lobata HOM05D000022 ORTHO05D000071 2.4e-07 60.8 217 25.8
TPR.G8303 Trifolium pratense HOM05D000022 ORTHO05D000071 2.4e-07 60.8 220 28.6
VMungo0720G1048 Vigna mungo HOM05D000022 ORTHO05D000071 2.4e-07 60.8 238 27.7
BcaB03g14818 Brassica carinata HOM05D000022 ORTHO05D000744 3.1e-07 60.5 252 25.8
PSO541G5722 Papaver somniferum HOM05D000022 ORTHO05D000071 3.1e-07 60.5 233 25.3
TWI38G0478 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 3.1e-07 60.5 238 26.1
TWI38G1681 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 3.1e-07 60.5 238 26.1
PGR042G0966 Punica granatum HOM05D000022 ORTHO05D000071 4.0e-07 60.1 191 28.8
Hund21320 Selenicereus undatus HOM05D000022 ORTHO05D000071 4.0e-07 60.1 206 28.2
CSS0012274 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 5.2e-07 59.7 220 26.4
CSS0026097 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 5.2e-07 59.7 213 27.7
CSS0027424 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 5.2e-07 59.7 213 27.2
Ca_10995_v3 Cicer arietinum L. HOM05D000022 ORTHO05D000071 5.2e-07 59.7 182 25.8
FAN25G0422 Fragaria x ananassa HOM05D000022 ORTHO05D000071 5.2e-07 59.7 218 25.2
TWI38G0423 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 5.2e-07 59.7 215 27.4
CSS0022201 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 6.9e-07 59.3 214 26.6
Migut.H00091 Erythranthe guttata HOM05D000022 ORTHO05D000744 6.9e-07 59.3 232 25.9
Potri.011G027800 Populus trichocarpa HOM05D000022 ORTHO05D000071 6.9e-07 59.3 213 26.8
Potri.011G028700 Populus trichocarpa HOM05D000022 ORTHO05D000071 6.9e-07 59.3 206 25.7
QL05p075962 Quercus lobata HOM05D000022 ORTHO05D000071 6.9e-07 59.3 219 25.6
TAR374G1336 Trochodendron aralioides HOM05D000022 ORTHO05D000744 6.9e-07 59.3 197 26.9
arahy.Tifrunner.gnm1.ann1.AD1RX8 Arachis hypogaea HOM05D000022 ORTHO05D000071 9.0e-07 58.9 239 23.0
CANSAT54G2321 Cannabis sativa HOM05D000022 ORTHO05D000071 9.0e-07 58.9 222 26.6
Eucgr.I00686 Eucalyptus grandis HOM05D000022 ORTHO05D000071 9.0e-07 58.9 203 24.1
Glyma.11G002800 Glycine max HOM05D000022 ORTHO05D000071 9.0e-07 58.9 198 26.3
vmacro03733 Vaccinium macrocarpon HOM05D000022 ORTHO05D000071 9.0e-07 58.9 193 28.5
Aa31LG9G1240 Aethionema arabicum HOM05D000022 ORTHO05D000744 1.2e-06 58.5 197 26.4
CiPaw.03G041600 Carya illinoinensis HOM05D000022 ORTHO05D000744 1.2e-06 58.5 194 27.8
AUR62012610 Chenopodium quinoa HOM05D000022 ORTHO05D000071 1.2e-06 58.5 182 26.9
Duzib235G0923 Durio zibethinus HOM05D000022 ORTHO05D000071 1.2e-06 58.5 202 28.2
Oeu035922.1 Olea europaea HOM05D000022 ORTHO05D000071 1.2e-06 58.5 218 26.1
Oeu054615.2 Olea europaea HOM05D000022 ORTHO05D000744 1.2e-06 58.5 218 25.7
Thecc.06G210800 Theobroma cacao HOM05D000022 ORTHO05D000071 1.2e-06 58.5 208 26.0
CARHR063730 Cardamine hirsuta HOM05D000022 ORTHO05D000744 1.5e-06 58.2 231 25.5
AUR62014637 Chenopodium quinoa HOM05D000022 ORTHO05D000071 1.5e-06 58.2 200 27.5
Medtr5g005530 Medicago truncatula HOM05D000022 ORTHO05D000071 1.5e-06 58.2 200 24.5
PGR042G2931 Punica granatum HOM05D000022 ORTHO05D000071 1.5e-06 58.2 231 26.4
QL05p075413 Quercus lobata HOM05D000022 ORTHO05D000071 1.5e-06 58.2 210 28.6
Eucgr.H04150 Eucalyptus grandis HOM05D000022 ORTHO05D000071 2.0e-06 57.8 257 23.7
Lsat_1_v5_gn_7_17880 Lactuca sativa HOM05D000022 ORTHO05D000071 2.0e-06 57.8 230 26.1
Manes.12G025400 Manihot esculenta HOM05D000022 ORTHO05D000744 2.0e-06 57.8 258 26.0
Medtr8g041650 Medicago truncatula HOM05D000022 ORTHO05D000071 2.0e-06 57.8 262 23.3
PSO063G6935 Papaver somniferum HOM05D000022 ORTHO05D000071 2.0e-06 57.8 227 22.0
RcHm_v2.0_Chr5g0004141 Rosa chinensis HOM05D000022 ORTHO05D000071 2.0e-06 57.8 206 24.3
AUR62022026 Chenopodium quinoa HOM05D000022 ORTHO05D000071 2.6e-06 57.4 222 24.8
AUR62043894 Chenopodium quinoa HOM05D000022 ORTHO05D000071 2.6e-06 57.4 222 24.8
Eucgr.E04128 Eucalyptus grandis HOM05D000022 ORTHO05D000071 2.6e-06 57.4 186 27.4
MBI02_g40778_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D000071 2.6e-06 57.4 233 25.3
Potri.011G073016 Populus trichocarpa HOM05D000054 ORTHO05D000171 2.6e-06 57.4 62 45.2
Carub.0002s1724 Capsella rubella HOM05D000022 ORTHO05D000744 3.4e-06 57.0 256 25.0
CDE04G0134 Ceratophyllum demersum HOM05D000022 ORTHO05D000744 3.4e-06 57.0 199 27.1
Eucgr.H02538 Eucalyptus grandis HOM05D000022 ORTHO05D000744 3.4e-06 57.0 242 24.4
FvH4_3g02731 Fragaria vesca HOM05D000022 ORTHO05D000071 3.4e-06 57.0 209 23.9
Nitab4.5_0009078g0040 Nicotiana tabacum HOM05D000022 ORTHO05D000744 3.4e-06 57.0 241 24.1
QL05p001423 Quercus lobata HOM05D000022 ORTHO05D000071 3.4e-06 57.0 233 27.0
Hund21340 Selenicereus undatus HOM05D000022 ORTHO05D000071 3.4e-06 57.0 197 26.9
SEGI_20401 Sequoiadendron giganteum HOM05D000022 ORTHO05D002153 3.4e-06 57.0 228 26.8
GSVIVG01032435001 Vitis vinifera HOM05D000022 ORTHO05D000744 3.4e-06 57.0 249 24.5
C07p52500 Brassica napus HOM05D000022 ORTHO05D000071 4.4e-06 56.6 198 27.8
CSS0017395 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 4.4e-06 56.6 213 25.8
CANSAT56G4296 Cannabis sativa HOM05D000022 ORTHO05D000071 4.4e-06 56.6 206 25.7
FvH4_3g02770 Fragaria vesca HOM05D000022 ORTHO05D000071 4.4e-06 56.6 209 25.8
Phvul.002G049301 Phaseolus vulgaris HOM05D000022 ORTHO05D000071 4.4e-06 56.6 218 22.9
QL08p032516 Quercus lobata HOM05D000022 ORTHO05D000071 4.4e-06 56.6 217 24.9
TAR622G1154 Trochodendron aralioides HOM05D000022 ORTHO05D000744 4.4e-06 56.6 213 26.8
CSS0034736 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000744 5.8e-06 56.2 206 26.7
DCAR_029808 Daucus carota HOM05D000022 ORTHO05D002153 5.8e-06 56.2 218 27.1
Nn1g06983 Nelumbo nucifera HOM05D000022 ORTHO05D000071 5.8e-06 56.2 206 24.8
SEGI_34827 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 5.8e-06 56.2 190 27.9
TAR633G1752 Trochodendron aralioides HOM05D000022 ORTHO05D000744 5.8e-06 56.2 208 26.4
Aqoxy4G02074 Aquilegia oxysepala HOM05D000022 ORTHO05D000071 7.6e-06 55.8 240 26.2
CiPaw.09G083800 Carya illinoinensis HOM05D000022 ORTHO05D000071 7.6e-06 55.8 247 24.7
Ca_24366_v3 Cicer arietinum L. HOM05D000022 ORTHO05D000071 7.6e-06 55.8 194 27.8
Migut.L01471 Erythranthe guttata HOM05D000022 ORTHO05D000744 7.6e-06 55.8 241 22.4
Migut.O00413 Erythranthe guttata HOM05D000022 ORTHO05D000071 7.6e-06 55.8 231 26.8
FAN07G2849 Fragaria x ananassa HOM05D000022 ORTHO05D000744 7.6e-06 55.8 231 25.1
Glyma.18G219600 Glycine max HOM05D000022 ORTHO05D010537 7.6e-06 55.8 226 26.1
MBI02_g09904_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D000071 7.6e-06 55.8 240 24.2
MD02G1101400 Malus domestica HOM05D000022 ORTHO05D000071 7.6e-06 55.8 216 25.0
MD09G1281900 Malus domestica HOM05D000022 ORTHO05D002153 7.6e-06 55.8 206 26.7
Oeu057050.1 Olea europaea HOM05D000022 ORTHO05D000744 7.6e-06 55.8 199 25.1
RcHm_v2.0_Chr4g0433531 Rosa chinensis HOM05D000022 ORTHO05D000744 7.6e-06 55.8 231 25.5
SalBow7G0707 Salvia bowleyana HOM05D000022 ORTHO05D000071 7.6e-06 55.8 204 26.5
PGSC0003DMG402000515 Solanum tuberosum HOM05D000022 ORTHO05D000744 7.6e-06 55.8 191 25.1
Thecc.06G213100 Theobroma cacao HOM05D000022 ORTHO05D000071 7.6e-06 55.8 214 25.7
TPR.G5517 Trifolium pratense HOM05D000022 ORTHO05D000071 7.6e-06 55.8 203 27.1
AL2G29910 Arabidopsis lyrata HOM05D000022 ORTHO05D000744 9.9e-06 55.5 224 25.0
AUR62012563 Chenopodium quinoa HOM05D000022 ORTHO05D000071 9.9e-06 55.5 199 26.6
AUR62014638 Chenopodium quinoa HOM05D000022 ORTHO05D000071 9.9e-06 55.5 208 26.9
Eucgr.E03744 Eucalyptus grandis HOM05D000022 ORTHO05D000071 9.9e-06 55.5 215 24.7
MBI02_g43951_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D000071 9.9e-06 55.5 222 25.2
Nitab4.5_0002739g0030 Nicotiana tabacum HOM05D000022 ORTHO05D000744 9.9e-06 55.5 197 25.9
SEGI_30916 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 9.9e-06 55.5 239 25.1


User provided reference genes

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