Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO234G0044 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 5.8e-172 607.4 302 100.0
SMO340G0035 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 2.4e-69 266.5 315 47.9
SMO067G0006 Selaginella moellendorffii HOM05D003732 ORTHO05D030126 1.2e-57 227.6 302 44.7
Pp3c5_23300 Physcomitrium patens HOM05D003732 ORTHO05D004965 6.4e-54 215.3 318 39.3
Pp3c21_14810 Physcomitrium patens HOM05D003732 ORTHO05D004965 4.1e-53 212.6 309 41.1
SMO239G0017 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 1.1e-50 204.5 313 40.6
AagrBONN_evm.TU.Sc2ySwM_117.3460 Anthoceros agrestis HOM05D003732 ORTHO05D004965 2.4e-45 186.8 352 33.5
Mapoly0073s0049 Marchantia polymorpha HOM05D003732 ORTHO05D004965 7.1e-45 185.3 303 35.0
Mapoly0071s0075 Marchantia polymorpha HOM05D003732 ORTHO05D004965 3.5e-44 183.0 305 34.8
SMO118G0022 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 2.3e-43 180.3 331 36.0
Mapoly2449s0001 Marchantia polymorpha HOM05D003732 ORTHO05D004965 3.4e-39 166.4 257 37.4
SMO358G0184 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 4.6e-36 156.0 310 34.8
SMO361G0102 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 2.3e-35 153.7 252 37.7
SMO358G0103 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 1.3e-33 147.9 297 34.3
AagrBONN_evm.TU.Sc2ySwM_117.955 Anthoceros agrestis HOM05D003732 ORTHO05D004965 1.3e-30 137.9 319 31.3
Pp3c1_40480 Physcomitrium patens HOM05D003732 ORTHO05D004965 1.1e-29 134.8 319 32.6
SMO358G0684 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 9.3e-29 131.7 306 32.4
Mapoly0218s0009 Marchantia polymorpha HOM05D003732 ORTHO05D004965 3.7e-25 119.8 341 30.2
SMO196G0264 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 4.2e-21 106.3 303 27.7
Cre11.g476550 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 2.1e-20 104.0 320 27.8
SMO356G0645 Selaginella moellendorffii HOM05D003732 ORTHO05D030126 3.4e-15 86.7 95 46.3
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 1.6e-12 77.8 321 24.9
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 1.6e-12 77.8 303 23.4
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 2.7e-12 77.0 306 23.9
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 4.6e-12 76.3 316 22.8
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.0e-11 75.1 303 25.1
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.8e-11 74.3 303 25.1
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 1.8e-11 74.3 231 27.3
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 3.9e-11 73.2 231 27.3
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 6.7e-11 72.4 231 26.0
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 8.7e-11 72.0 231 26.4
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 1.9e-10 70.9 299 24.7
Mapoly0065s0061 Marchantia polymorpha HOM05D049285 ORTHO05D030126 3.3e-10 70.1 103 36.9
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 4.3e-10 69.7 231 26.8
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 4.3e-10 69.7 232 28.9
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 4.3e-10 69.7 259 27.0
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 4.3e-10 69.7 231 26.0
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 7.4e-10 68.9 232 25.4
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 9.7e-10 68.6 250 25.6
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 2.2e-09 67.4 242 26.9
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 2.2e-09 67.4 231 26.4
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 2.2e-09 67.4 231 26.4
Zm00001eb070150 Zea mays HOM05D005791 ORTHO05D007452 2.8e-09 67.0 333 23.7
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 4.8e-09 66.2 235 25.5
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 1.1e-08 65.1 232 26.3
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 1.1e-08 65.1 232 25.0
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 1.1e-08 65.1 232 25.0
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 1.4e-08 64.7 232 25.0
unitig_736.g22425 Utricularia gibba HOM05D005791 ORTHO05D007452 1.4e-08 64.7 341 25.8
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.8e-08 64.3 261 25.3
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.8e-08 64.3 224 26.3
Cc09_g10020 Coffea canephora HOM05D001548 ORTHO05D003922 3.1e-08 63.5 273 25.6
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 4.1e-08 63.2 261 25.3
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 5.3e-08 62.8 195 29.7
SalBow2G0183 Salvia bowleyana HOM05D005791 ORTHO05D007452 1.3e-06 58.2 334 22.8
THA.LOC104800311 Tarenaya hassleriana HOM05D000219 ORTHO05D006860 1.7e-06 57.8 168 27.4
Potri.004G138700 Populus trichocarpa HOM05D000219 ORTHO05D006860 6.5e-06 55.8 163 28.2
MD07G1238300 Malus domestica HOM05D005791 ORTHO05D007452 8.5e-06 55.5 337 25.2


User provided reference genes

Program Settings