Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO234G0024 Selaginella moellendorffii HOM05D008348 ORTHO05D011307 0.0e+00 4269.2 2191 100.0
SMO367G1214 Selaginella moellendorffii HOM05D008348 ORTHO05D011307 0.0e+00 1924.8 2230 48.5
SEGI_35691 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1477.2 2291 39.1
SEGI_32820 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1463.0 2273 38.9
SEGI_19137 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1431.0 2252 40.1
SEGI_01625 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1415.2 2259 39.8
SEGI_40780 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1383.2 2266 37.9
SEGI_17253 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1376.3 2247 39.0
SEGI_37011 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1305.4 2247 37.4
SEGI_40395 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1302.3 2269 36.7
SEGI_05032 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1279.6 2267 35.9
SEGI_30281 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1241.1 1539 42.2
SEGI_29501 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1229.5 1547 42.5
AagrBONN_evm.TU.Sc2ySwM_362.2245__2246 Anthoceros agrestis HOM05D008348 ORTHO05D011307 0.0e+00 1219.1 2316 36.3
AagrBONN_evm.TU.Sc2ySwM_362.2202 Anthoceros agrestis HOM05D008348 ORTHO05D011307 0.0e+00 1211.1 2118 37.5
SEGI_02997 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 0.0e+00 1156.7 1454 44.8
SEGI_36216 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 1.6e-300 1037.3 1139 51.4
SEGI_19083 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 1.2e-295 1021.1 1106 51.5
AagrBONN_evm.TU.Sc2ySwM_362.2205 Anthoceros agrestis HOM05D008348 ORTHO05D011307 1.3e-249 868.2 955 50.7
SEGI_18464 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 3.1e-243 847.0 1674 33.8
SMO153G0011 Selaginella moellendorffii HOM05D008348 ORTHO05D376323 5.6e-216 756.5 817 51.9
SEGI_03335 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 6.2e-207 726.5 924 43.3
SEGI_12513 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 7.3e-200 703.0 1194 40.4
SEGI_30698 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 1.9e-195 688.3 1106 38.2
AagrBONN_evm.TU.Sc2ySwM_362.2228 Anthoceros agrestis HOM05D008348 ORTHO05D011307 1.2e-194 685.6 955 41.7
AagrBONN_evm.TU.Sc2ySwM_362.2298 Anthoceros agrestis HOM05D008348 ORTHO05D011307 1.7e-180 638.6 1448 32.5
AagrBONN_evm.TU.Sc2ySwM_362.2310 Anthoceros agrestis HOM05D008348 ORTHO05D011307 1.0e-177 629.4 1370 32.8
SEGI_38489 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 2.5e-176 624.8 704 51.6
SEGI_35382 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 4.3e-176 624.0 670 55.7
SEGI_00384 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 5.9e-165 587.0 839 40.2
AagrBONN_evm.TU.Sc2ySwM_362.2459 Anthoceros agrestis HOM05D008348 ORTHO05D011307 3.8e-124 451.4 1259 29.3
SMO153G0010 Selaginella moellendorffii HOM05D008348 ORTHO05D379269 2.7e-117 428.7 842 38.1
SEGI_19251 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 7.5e-112 410.6 403 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2313 Anthoceros agrestis HOM05D008348 ORTHO05D011307 4.6e-101 374.8 355 53.8
SEGI_00143 Sequoiadendron giganteum HOM05D008348 ORTHO05D011307 2.5e-99 369.0 400 48.0
SMO348G0106 Selaginella moellendorffii HOM05D008348 ORTHO05D375156 4.7e-98 364.8 677 39.4
AagrBONN_evm.TU.Sc2ySwM_368.989 Anthoceros agrestis HOM05D008348 ORTHO05D072639 3.5e-93 348.6 1162 27.4
AagrBONN_evm.TU.Sc2ySwM_362.2299 Anthoceros agrestis HOM05D008348 ORTHO05D071968 5.6e-83 314.7 390 45.6
AagrBONN_evm.TU.Sc2ySwM_368.990 Anthoceros agrestis HOM05D008348 ORTHO05D011307 2.5e-75 289.3 387 42.1
SEGI_12589 Sequoiadendron giganteum HOM05D008348 ORTHO05D021240 1.4e-70 273.5 1108 23.4
AagrBONN_evm.TU.Sc2ySwM_362.2248 Anthoceros agrestis HOM05D008348 ORTHO05D011307 6.5e-63 248.1 288 47.2
AagrBONN_evm.TU.Sc2ySwM_362.2300 Anthoceros agrestis HOM05D008348 ORTHO05D072436 2.6e-56 226.1 235 49.4
AagrBONN_evm.TU.Sc2ySwM_362.2301 Anthoceros agrestis HOM05D008348 ORTHO05D076743 1.5e-51 210.3 388 33.2
AagrBONN_evm.TU.Sc2ySwM_362.2308 Anthoceros agrestis HOM05D008348 ORTHO05D072298 1.3e-47 197.2 147 63.9
SMO343G0019 Selaginella moellendorffii HOM05D008348 ORTHO05D021240 4.7e-45 188.7 419 31.3
AagrBONN_evm.TU.Sc2ySwM_362.2309 Anthoceros agrestis HOM05D008348 ORTHO05D074225 9.7e-43 181.0 257 42.8
AagrBONN_evm.TU.Sc2ySwM_362.2203 Anthoceros agrestis HOM05D008348 ORTHO05D021240 1.1e-38 167.5 499 29.3
AagrBONN_evm.TU.Sc2ySwM_362.2307 Anthoceros agrestis HOM05D008348 ORTHO05D072451 1.1e-33 151.0 294 33.0
AagrBONN_evm.TU.Sc2ySwM_362.2458 Anthoceros agrestis HOM05D008348 ORTHO05D072794 6.7e-28 131.7 220 36.4
AagrBONN_evm.TU.Sc2ySwM_362.2312 Anthoceros agrestis HOM05D008348 ORTHO05D072655 1.5e-27 130.6 226 33.6
AagrBONN_evm.TU.Sc2ySwM_362.2306 Anthoceros agrestis HOM05D008348 ORTHO05D021240 2.0e-27 130.2 333 31.5
AagrBONN_evm.TU.Sc2ySwM_362.2249 Anthoceros agrestis HOM05D008348 ORTHO05D031193 1.4e-25 124.0 203 38.4
AagrBONN_evm.TU.Sc2ySwM_362.2302 Anthoceros agrestis HOM05D008348 ORTHO05D021240 1.8e-25 123.6 232 35.8
AagrBONN_evm.TU.Sc2ySwM_362.2247 Anthoceros agrestis HOM05D008348 ORTHO05D021240 2.5e-22 113.2 289 30.4
SEGI_28660 Sequoiadendron giganteum HOM05D008348 ORTHO05D031193 1.9e-14 87.0 107 41.1
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 3.3e-14 86.3 77 55.8
SMO361G0251 Selaginella moellendorffii HOM05D010668 ORTHO05D378045 7.5e-11 75.1 49 65.3
COL.COLO4_38600 Corchorus olitorius HOM05D001162 ORTHO05D001218 4.9e-10 72.4 464 26.1
SEGI_24586 Sequoiadendron giganteum HOM05D001138 ORTHO05D001015 4.9e-10 72.4 87 44.8
AT1G72960 Arabidopsis thaliana HOM05D001162 ORTHO05D001218 1.8e-09 70.5 461 23.9
AL2G32710 Arabidopsis lyrata HOM05D001162 ORTHO05D001218 2.4e-09 70.1 461 23.9
CARHR065930 Cardamine hirsuta HOM05D001162 ORTHO05D001218 1.2e-08 67.8 461 24.1
Thhalv10018140m.g Eutrema salsugineum HOM05D001162 ORTHO05D001218 1.2e-08 67.8 434 24.4
C06p47230 Brassica napus HOM05D001162 ORTHO05D001218 1.6e-08 67.4 561 23.0
C06p34450 Brassica napus HOM05D001162 ORTHO05D001218 2.3e-07 63.5 497 23.9
BcaB03g15031 Brassica carinata HOM05D001162 ORTHO05D001218 2.9e-07 63.2 459 24.4
A07p39020 Brassica napus HOM05D001162 ORTHO05D001218 2.9e-07 63.2 446 24.2
Sp5g27930 Schrenkiella parvula HOM05D001162 ORTHO05D001218 3.8e-07 62.8 461 23.4
A07p30030 Brassica napus HOM05D001162 ORTHO05D001218 5.0e-07 62.4 432 24.8
BolC6t39762H Brassica oleracea HOM05D001162 ORTHO05D001218 6.6e-07 62.0 459 24.2
SMO367G0418 Selaginella moellendorffii HOM05D041463 ORTHO05D005621 6.6e-07 62.0 61 45.9
SMO367G0510 Selaginella moellendorffii HOM05D041463 ORTHO05D005621 6.6e-07 62.0 61 44.3
MBI11_g12664_MAGBIO Magnolia biondii HOM05D001162 ORTHO05D001218 1.5e-06 60.8 196 30.1
TWI75G1499 Tripterygium wilfordii HOM05D001162 ORTHO05D001218 1.5e-06 60.8 401 24.7
Actinidia39114 Actinidia chinensis HOM05D001162 ORTHO05D001218 1.9e-06 60.5 192 26.6
Nn6g35482 Nelumbo nucifera HOM05D001162 ORTHO05D001218 1.9e-06 60.5 91 42.9
AL3G26030 Arabidopsis lyrata HOM05D001162 ORTHO05D001218 2.5e-06 60.1 131 35.9
Lj5C45T5 Lonicera japonica HOM05D001162 ORTHO05D001218 2.5e-06 60.1 392 23.5
Duzib160G0505 Durio zibethinus HOM05D001162 ORTHO05D001218 3.3e-06 59.7 143 37.1
Actinidia32146 Actinidia chinensis HOM05D001162 ORTHO05D001218 4.3e-06 59.3 103 40.8
Lj3g0018514 Lotus japonicus HOM05D001162 ORTHO05D001218 4.3e-06 59.3 103 40.8
BcaB06g25429 Brassica carinata HOM05D001162 ORTHO05D001218 5.6e-06 58.9 125 36.0
CARHR088660 Cardamine hirsuta HOM05D001162 ORTHO05D001218 5.6e-06 58.9 130 33.8
Ciclev10024908m.g Citrus clementina HOM05D001162 ORTHO05D001218 5.6e-06 58.9 103 40.8
Migut.D00969 Erythranthe guttata HOM05D001162 ORTHO05D001218 5.6e-06 58.9 189 29.6
Actinidia21759 Actinidia chinensis HOM05D001162 ORTHO05D001218 7.3e-06 58.5 103 39.8
Dinv37914 Davidia involucrata HOM05D001162 ORTHO05D001218 7.3e-06 58.5 128 36.7
Glyma.07G010200 Glycine max HOM05D001162 ORTHO05D001218 7.3e-06 58.5 103 39.8
Hma1.2p1_0388F.1_g142340 Hydrangea macrophylla HOM05D001162 ORTHO05D001218 7.3e-06 58.5 103 39.8
Lalb_Chr25g0280711 Lupinus albus HOM05D001162 ORTHO05D001218 7.3e-06 58.5 103 39.8
Manes.04G139600 Manihot esculenta HOM05D001162 ORTHO05D001218 7.3e-06 58.5 103 39.8
A03p38510 Brassica napus HOM05D001162 ORTHO05D001218 9.5e-06 58.2 124 35.5
HanXRQChr04g0110621 Helianthus annuus HOM05D001162 ORTHO05D001218 9.5e-06 58.2 115 36.5
RcHm_v2.0_Chr5g0019391 Rosa chinensis HOM05D001162 ORTHO05D001218 9.5e-06 58.2 197 29.9
Hund20855 Selenicereus undatus HOM05D001162 ORTHO05D001218 9.5e-06 58.2 102 39.2
Solyc03g121590.3 Solanum lycopersicum HOM05D001162 ORTHO05D001218 9.5e-06 58.2 197 28.9
Sopen03g040400 Solanum pennellii HOM05D001162 ORTHO05D001218 9.5e-06 58.2 197 28.9


User provided reference genes

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