Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO232G0084 Selaginella moellendorffii HOM05D025941 ORTHO05D379280 4.5e-164 581.3 309 100.0
SMO169G0241 Selaginella moellendorffii HOM05D025941 ORTHO05D375861 2.8e-145 518.8 310 91.0
SMO298G0045 Selaginella moellendorffii HOM05D025941 ORTHO05D373972 5.1e-131 471.5 321 83.2
SMO169G0320 Selaginella moellendorffii HOM05D025941 ORTHO05D378389 5.9e-71 271.9 306 55.2
SMO364G0825 Selaginella moellendorffii HOM05D000343 ORTHO05D003187 3.5e-15 86.7 127 47.2
AagrBONN_evm.TU.Sc2ySwM_228.4544 Anthoceros agrestis HOM05D000343 ORTHO05D003187 6.2e-12 75.9 90 51.1
Lj4g0026107 Lotus japonicus HOM05D000343 ORTHO05D003187 1.5e-10 71.2 115 40.9
arahy.Tifrunner.gnm1.ann1.NH81W7 Arachis hypogaea HOM05D000343 ORTHO05D003187 2.0e-10 70.9 120 40.8
Lj4g0004945 Lotus japonicus HOM05D000343 ORTHO05D003187 4.4e-10 69.7 96 44.8
arahy.Tifrunner.gnm1.ann1.6QFK0R Arachis hypogaea HOM05D000343 ORTHO05D003187 5.8e-10 69.3 120 40.0
Pp3c6_24750 Physcomitrium patens HOM05D000343 ORTHO05D003187 7.6e-10 68.9 91 45.1
AUR62021341 Chenopodium quinoa HOM05D000343 ORTHO05D003187 9.9e-10 68.6 121 42.1
Medtr4g127580 Medicago truncatula HOM05D000343 ORTHO05D003187 9.9e-10 68.6 115 40.0
Lalb_Chr07g0180611 Lupinus albus HOM05D000343 ORTHO05D003187 1.3e-09 68.2 120 40.0
TWI63G0419 Tripterygium wilfordii HOM05D000343 ORTHO05D003187 1.7e-09 67.8 129 42.6
AUR62033256 Chenopodium quinoa HOM05D000343 ORTHO05D003187 2.9e-09 67.0 101 44.6
Glyma.13G099600 Glycine max HOM05D000343 ORTHO05D003187 2.9e-09 67.0 120 40.0
Mapoly0019s0084 Marchantia polymorpha HOM05D000343 ORTHO05D003187 6.4e-09 65.9 122 36.1
Psat0ss2585g0200 Pisum sativum HOM05D000343 ORTHO05D003187 6.4e-09 65.9 147 36.1
SMO144G0033 Selaginella moellendorffii HOM05D000343 ORTHO05D003187 6.4e-09 65.9 87 44.8
SMO229G0029 Selaginella moellendorffii HOM05D000343 ORTHO05D003187 6.4e-09 65.9 87 44.8
SEGI_23565 Sequoiadendron giganteum HOM05D000343 ORTHO05D003187 8.4e-09 65.5 100 45.0
Ah.14g083590 Amaranthus hybridus HOM05D000343 ORTHO05D003187 1.1e-08 65.1 101 44.6
SMO119G0230 Selaginella moellendorffii HOM05D000343 ORTHO05D003187 1.4e-08 64.7 87 43.7
Lalb_Chr12g0199521 Lupinus albus HOM05D000343 ORTHO05D003187 2.4e-08 63.9 119 37.0
Sc14g0001430 Simmondsia chinensis HOM05D000343 ORTHO05D003187 2.4e-08 63.9 147 34.7
TWI32G1229 Tripterygium wilfordii HOM05D000343 ORTHO05D003187 2.4e-08 63.9 128 39.1
Zm00001eb226870 Zea mays HOM05D000343 ORTHO05D003187 2.4e-08 63.9 106 42.5
CARHR238020 Cardamine hirsuta HOM05D000343 ORTHO05D003187 3.2e-08 63.5 102 44.1
PSO144G0041 Papaver somniferum HOM05D000343 ORTHO05D003187 3.2e-08 63.5 102 43.1
PSO423G0170 Papaver somniferum HOM05D000343 ORTHO05D003187 3.2e-08 63.5 102 43.1
Aa31LG2G20460 Aethionema arabicum HOM05D000343 ORTHO05D003187 4.2e-08 63.2 106 41.5
Ciclev10000354m.g Citrus clementina HOM05D000343 ORTHO05D003187 4.2e-08 63.2 161 34.8
Ciclev10001150m.g Citrus clementina HOM05D000343 ORTHO05D003187 4.2e-08 63.2 161 34.8
Rhsim01G0119800 Rhododendron simsii HOM05D000343 ORTHO05D003187 4.2e-08 63.2 119 39.5
AagrBONN_evm.TU.Sc2ySwM_368.918 Anthoceros agrestis HOM05D000343 ORTHO05D003187 5.4e-08 62.8 98 38.8
EL10Ac8g18327 Beta vulgaris HOM05D000343 ORTHO05D003187 5.4e-08 62.8 101 41.6
Carub.0007s1049 Capsella rubella HOM05D000343 ORTHO05D003187 5.4e-08 62.8 102 44.1
Hund09054 Selenicereus undatus HOM05D000343 ORTHO05D003187 5.4e-08 62.8 101 42.6
Hund26314 Selenicereus undatus HOM05D000343 ORTHO05D003187 5.4e-08 62.8 90 43.3
TAR383G0358 Trochodendron aralioides HOM05D000343 ORTHO05D003187 5.4e-08 62.8 102 43.1
Aqoxy7G02748 Aquilegia oxysepala HOM05D000343 ORTHO05D003187 7.1e-08 62.4 129 36.4
Thhalv10024341m.g Eutrema salsugineum HOM05D000343 ORTHO05D003187 7.1e-08 62.4 101 44.6
HPP92_017112 Vanilla planifolia HOM05D000343 ORTHO05D003187 9.3e-08 62.0 102 42.2
Potri.006G076900 Populus trichocarpa HOM05D000343 ORTHO05D003187 1.6e-07 61.2 120 38.3
PGR142G1489 Punica granatum HOM05D000343 ORTHO05D003187 1.6e-07 61.2 105 38.1
vmacro20831 Vaccinium macrocarpon HOM05D000343 ORTHO05D003187 1.6e-07 61.2 102 43.1
A01p08030 Brassica napus HOM05D000343 ORTHO05D003187 2.1e-07 60.8 101 42.6
BraA01t00748Z Brassica rapa HOM05D000343 ORTHO05D003187 2.1e-07 60.8 101 42.6
CARHR109620 Cardamine hirsuta HOM05D000343 ORTHO05D003187 2.1e-07 60.8 97 39.2
Ciclev10003938m.g Citrus clementina HOM05D000343 ORTHO05D003187 2.1e-07 60.8 161 34.2
BcaNung04411 Brassica carinata HOM05D000343 ORTHO05D003187 2.7e-07 60.5 101 42.6
AT4G30110 Arabidopsis thaliana HOM05D000343 ORTHO05D003187 3.5e-07 60.1 102 42.2
SalBow5G5487 Salvia bowleyana HOM05D000343 ORTHO05D003187 3.5e-07 60.1 102 41.2
Sp7g27960 Schrenkiella parvula HOM05D000343 ORTHO05D003187 3.5e-07 60.1 101 43.6
AT2G19110 Arabidopsis thaliana HOM05D000343 ORTHO05D003187 4.6e-07 59.7 97 39.2
C01p09010 Brassica napus HOM05D000343 ORTHO05D003187 6.0e-07 59.3 101 41.6
Phvul.003G142700 Phaseolus vulgaris HOM05D000343 ORTHO05D003187 6.0e-07 59.3 102 38.2
MELO3C003996.2 Cucumis melo HOM05D000343 ORTHO05D003187 7.8e-07 58.9 147 32.7
SGA_v2.0_scaffold46G17353 Striga asiatica HOM05D000343 ORTHO05D003187 7.8e-07 58.9 121 37.2
Zm00001eb095010 Zea mays HOM05D000343 ORTHO05D003187 7.8e-07 58.9 102 39.2
AL1G54170 Arabidopsis lyrata HOM05D000343 ORTHO05D003187 1.0e-06 58.5 97 38.1
AL3G52820 Arabidopsis lyrata HOM05D000343 ORTHO05D003187 1.0e-06 58.5 97 38.1
BcaC09g51788 Brassica carinata HOM05D000343 ORTHO05D003187 1.3e-06 58.2 110 38.2
TAR383G0119 Trochodendron aralioides HOM05D000343 ORTHO05D003187 1.7e-06 57.8 102 41.2
BcaC09g51790 Brassica carinata HOM05D000343 ORTHO05D003187 2.3e-06 57.4 101 41.6
C01p08990 Brassica napus HOM05D000343 ORTHO05D003187 2.3e-06 57.4 101 41.6
BolC1t00890H Brassica oleracea HOM05D000343 ORTHO05D003187 2.3e-06 57.4 101 41.6
Cc06_g21680 Coffea canephora HOM05D000343 ORTHO05D003187 2.3e-06 57.4 102 40.2
Pp3c2_8660 Physcomitrium patens HOM05D000343 ORTHO05D003187 2.3e-06 57.4 91 39.6
BcaB03g16707 Brassica carinata HOM05D000343 ORTHO05D003187 3.0e-06 57.0 97 39.2
CANSAT11G1272 Cannabis sativa HOM05D000343 ORTHO05D003187 6.6e-06 55.8 86 43.0


User provided reference genes

Program Settings