Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.6e-56 221.9 113 100.0
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 3.6e-42 174.9 95 91.6
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 5.6e-19 97.8 106 42.5
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 8.0e-18 94.0 90 48.9
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.8e-17 92.8 90 45.6
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.8e-17 92.8 99 42.4
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.3e-17 92.4 98 42.9
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.1e-17 92.0 98 42.9
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 5.2e-17 91.3 98 40.8
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 5.2e-17 91.3 100 40.0
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 5.2e-17 91.3 90 45.6
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 6.8e-17 90.9 108 38.9
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 8.9e-17 90.5 104 44.2
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 8.9e-17 90.5 98 40.8
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.2e-16 90.1 100 39.0
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.2e-16 90.1 98 39.8
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.2e-16 90.1 98 42.9
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.0e-16 89.4 104 40.4
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.0e-16 89.4 98 39.8
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 2.0e-16 89.4 100 42.0
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 2.0e-16 89.4 98 39.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 2.0e-16 89.4 98 39.8
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.6e-16 89.0 98 41.8
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.6e-16 89.0 98 41.8
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 2.6e-16 89.0 98 39.8
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.4e-16 88.6 98 40.8
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 3.4e-16 88.6 98 40.8
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.4e-16 88.6 109 39.4
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 3.4e-16 88.6 98 44.9
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.4e-16 88.2 98 39.8
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 4.4e-16 88.2 90 42.2
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.4e-16 88.2 90 45.6
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 5.8e-16 87.8 98 38.8
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 5.8e-16 87.8 98 38.8
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 7.5e-16 87.4 108 41.7
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 7.5e-16 87.4 98 39.8
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 9.8e-16 87.0 91 45.1
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 9.8e-16 87.0 98 39.8
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 9.8e-16 87.0 104 40.4
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 9.8e-16 87.0 99 40.4
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 1.3e-15 86.7 99 42.4
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.3e-15 86.7 98 38.8
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.3e-15 86.7 98 39.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.3e-15 86.7 98 39.8
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.3e-15 86.7 104 40.4
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.3e-15 86.7 90 43.3
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.7e-15 86.3 98 36.7
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.7e-15 86.3 90 41.1
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.7e-15 86.3 98 38.8
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.2e-15 85.9 98 40.8
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.2e-15 85.9 88 44.3
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.2e-15 85.9 108 37.0
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 2.2e-15 85.9 98 38.8
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 2.2e-15 85.9 90 40.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 2.9e-15 85.5 98 38.8
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.9e-15 85.5 98 38.8
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 3.7e-15 85.1 98 37.8
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 3.7e-15 85.1 98 36.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.7e-15 85.1 98 38.8
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.7e-15 85.1 98 38.8
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 3.7e-15 85.1 98 37.8
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 4.9e-15 84.7 98 39.8
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 4.9e-15 84.7 102 37.3
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 6.4e-15 84.3 98 40.8
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 8.3e-15 84.0 100 38.0
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 8.3e-15 84.0 98 38.8
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.4e-14 83.2 98 39.8
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.4e-14 83.2 98 38.8
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.4e-14 83.2 98 38.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 1.9e-14 82.8 98 38.8
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.9e-14 82.8 98 38.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.9e-14 82.8 107 33.6
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 2.4e-14 82.4 98 36.7
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.4e-14 82.4 101 36.6
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 2.4e-14 82.4 98 37.8
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 2.4e-14 82.4 98 36.7
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 2.4e-14 82.4 99 36.4
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 2.4e-14 82.4 97 38.1
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.2e-14 82.0 100 39.0
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 3.2e-14 82.0 98 37.8
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 4.1e-14 81.6 98 37.8
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 4.1e-14 81.6 111 36.9
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 7.0e-14 80.9 98 37.8
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 7.0e-14 80.9 98 37.8
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 7.0e-14 80.9 98 37.8
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 7.0e-14 80.9 98 37.8
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 7.0e-14 80.9 98 37.8
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 9.2e-14 80.5 100 38.0
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 3.5e-13 78.6 98 36.7
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.5e-13 78.6 104 36.5
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 4.6e-13 78.2 98 35.7
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 6.0e-13 77.8 98 35.7
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.0e-12 77.0 95 35.8
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.3e-12 76.6 99 38.4
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.7e-12 76.3 97 38.1
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 2.3e-12 75.9 98 35.7
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 3.9e-12 75.1 131 31.3
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 5.0e-12 74.7 83 41.0
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 6.6e-12 74.3 128 31.2
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 1.1e-11 73.6 97 35.1
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.5e-11 73.2 127 31.5
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.3e-11 71.6 63 50.8
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 4.3e-11 71.6 137 29.9
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 5.6e-11 71.2 101 35.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 7.3e-11 70.9 100 36.0
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 9.5e-11 70.5 119 31.1
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.6e-10 69.7 81 38.3
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.1e-10 69.3 63 46.0
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 6.2e-10 67.8 63 46.0
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.1e-09 67.0 83 39.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 5.2e-09 64.7 64 42.2
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 5.2e-09 64.7 58 46.6
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 6.8e-09 64.3 63 41.3
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 2.6e-08 62.4 98 33.7


User provided reference genes

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