Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO232G0058 Selaginella moellendorffii HOM05D005500 ORTHO05D006906 2.2e-246 855.1 409 100.0
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 2.7e-15 87.4 340 24.4
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 5.7e-13 79.7 342 24.3
Pp3c8_10900 Physcomitrium patens HOM05D004302 ORTHO05D004939 3.1e-11 73.9 328 23.5
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.3e-11 73.2 362 22.9
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.6e-10 70.9 233 27.0
Sc11g0000420 Simmondsia chinensis HOM05D002809 ORTHO05D004563 1.0e-09 68.9 352 25.3
AagrBONN_evm.TU.Sc2ySwM_228.5314 Anthoceros agrestis HOM05D005500 ORTHO05D006906 2.2e-09 67.8 389 23.9
Mapoly0186s0014 Marchantia polymorpha HOM05D004302 ORTHO05D004939 2.2e-09 67.8 380 23.2
Mapoly1710s0002 Marchantia polymorpha HOM05D005561 ORTHO05D006834 2.2e-09 67.8 299 25.1
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 2.2e-09 67.8 300 26.3
AagrBONN_evm.TU.Sc2ySwM_228.1930 Anthoceros agrestis HOM05D004302 ORTHO05D004939 8.5e-09 65.9 131 32.1
arahy.Tifrunner.gnm1.ann1.SI5VCQ Arachis hypogaea HOM05D000007 ORTHO05D000017 1.1e-08 65.5 207 26.1
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 2.5e-08 64.3 352 23.0
unitig_747.g21324 Utricularia gibba HOM05D003005 ORTHO05D004170 4.2e-08 63.5 380 25.3
AagrBONN_evm.TU.Sc2ySwM_344.3713 Anthoceros agrestis HOM05D005500 ORTHO05D006906 5.5e-08 63.2 383 21.1
arahy.Tifrunner.gnm1.ann1.N7LN0W Arachis hypogaea HOM05D000007 ORTHO05D000017 1.2e-07 62.0 198 27.3
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 1.2e-07 62.0 174 28.7
Lsat_1_v5_gn_3_30801 Lactuca sativa HOM05D002809 ORTHO05D004563 1.6e-07 61.6 138 28.3
SEGI_32653 Sequoiadendron giganteum HOM05D006415 ORTHO05D008549 1.6e-07 61.6 363 20.7
AagrBONN_evm.TU.Sc2ySwM_228.228 Anthoceros agrestis HOM05D005500 ORTHO05D006906 2.1e-07 61.2 94 35.1
Medtr1g033310 Medicago truncatula HOM05D002809 ORTHO05D004563 2.1e-07 61.2 134 27.6
CANSAT01G2827 Cannabis sativa HOM05D002809 ORTHO05D004563 3.6e-07 60.5 136 27.9
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.6e-07 60.5 367 22.3
Zm00001eb143020 Zea mays HOM05D002809 ORTHO05D004563 3.6e-07 60.5 137 27.0
Mapoly0083s0085 Marchantia polymorpha HOM05D002809 ORTHO05D004563 4.7e-07 60.1 225 25.8
PGR031G0299 Punica granatum HOM05D003005 ORTHO05D004170 4.7e-07 60.1 161 31.1
COL.COLO4_09165 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.1e-07 59.7 165 29.7
Lsat_1_v5_gn_8_147861 Lactuca sativa HOM05D002809 ORTHO05D004563 6.1e-07 59.7 151 28.5
Eucgr.F00082 Eucalyptus grandis HOM05D007423 ORTHO05D009091 7.9e-07 59.3 298 24.5
Hund25470 Selenicereus undatus HOM05D002809 ORTHO05D004563 7.9e-07 59.3 179 27.9
Zm00001eb364210 Zea mays HOM05D002809 ORTHO05D004563 7.9e-07 59.3 138 26.1
Medtr4g023190 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-06 58.5 297 24.6
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 1.8e-06 58.2 251 26.3
AagrBONN_evm.TU.Sc2ySwM_228.4594 Anthoceros agrestis HOM05D005500 ORTHO05D006906 1.8e-06 58.2 106 32.1
arahy.Tifrunner.gnm1.ann1.PR6200 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.8e-06 58.2 137 30.7
Peaxi162Scf00128g00136 Petunia axillaris HOM05D002809 ORTHO05D004563 1.8e-06 58.2 180 25.6
Actinidia30638 Actinidia chinensis HOM05D002809 ORTHO05D004563 2.3e-06 57.8 148 27.7
Dinv24457 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-06 57.4 133 29.3
unitig_747.g21123 Utricularia gibba HOM05D002809 ORTHO05D004563 3.0e-06 57.4 160 28.8
AagrBONN_evm.TU.Sc2ySwM_344.315 Anthoceros agrestis HOM05D005500 ORTHO05D006906 3.9e-06 57.0 102 32.4
Mapoly0093s0087 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.9e-06 57.0 155 25.8
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 5.1e-06 56.6 129 27.9
AagrBONN_evm.TU.Sc2ySwM_228.508 Anthoceros agrestis HOM05D005500 ORTHO05D006906 8.8e-06 55.8 91 34.1
AagrBONN_evm.TU.Sc2ySwM_344.648 Anthoceros agrestis HOM05D005500 ORTHO05D006906 8.8e-06 55.8 105 28.6
arahy.Tifrunner.gnm1.ann1.N9LGBL Arachis hypogaea HOM05D000007 ORTHO05D000017 8.8e-06 55.8 137 29.9
QL02p032184 Quercus lobata HOM05D003005 ORTHO05D004170 8.8e-06 55.8 160 27.5


User provided reference genes

Program Settings