Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO230G0125 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 7.8e-97 357.1 173 100.0
SMO141G0264 Selaginella moellendorffii HOM05D010558 ORTHO05D018109 3.1e-69 265.4 176 76.1
SMO140G0071 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 5.9e-44 181.4 92 89.1
SMO160G0007 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 3.9e-32 142.1 130 53.1
SMO139G0006 Selaginella moellendorffii HOM05D010558 ORTHO05D018109 1.1e-23 114.0 162 45.1
SMO111G0040 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 3.3e-23 112.5 71 71.8
SMO146G0007 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 5.5e-18 95.1 161 41.0
SMO170G0038 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 6.3e-14 81.6 43 90.7
SMO140G0010 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 1.4e-13 80.5 55 67.3
AagrBONN_evm.TU.Sc2ySwM_228.4090 Anthoceros agrestis HOM05D000953 ORTHO05D000231 3.5e-12 75.9 81 40.7
SMO167G0072 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 8.5e-11 71.2 92 33.7
AagrBONN_evm.TU.Sc2ySwM_228.1081 Anthoceros agrestis HOM05D000953 ORTHO05D000231 5.5e-10 68.6 104 33.7
SMO165G0001 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 2.1e-09 66.6 66 59.1
SMO140G0009 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 4.7e-09 65.5 37 81.1
Sed0006644 Sechium edule HOM05D000953 ORTHO05D000231 1.4e-08 63.9 77 37.7
SMO142G0062 Selaginella moellendorffii HOM05D010558 ORTHO05D015742 1.4e-08 63.9 37 78.4
ECA234G3320 Erigeron canadensis HOM05D000953 ORTHO05D000231 1.8e-08 63.5 85 34.1
AUR62000404 Chenopodium quinoa HOM05D000953 ORTHO05D000231 4.0e-08 62.4 85 35.3
AUR62006761 Chenopodium quinoa HOM05D000953 ORTHO05D000231 4.0e-08 62.4 85 35.3
Duzib187G0745 Durio zibethinus HOM05D000953 ORTHO05D000231 5.2e-08 62.0 77 36.4
Psat1g131800 Pisum sativum HOM05D000953 ORTHO05D000231 5.2e-08 62.0 85 32.9
AUR62000415 Chenopodium quinoa HOM05D000953 ORTHO05D000231 6.8e-08 61.6 85 34.1
Aa31LG2G20760 Aethionema arabicum HOM05D000953 ORTHO05D000231 8.8e-08 61.2 85 29.4
Ah.14g084890 Amaranthus hybridus HOM05D000953 ORTHO05D000231 8.8e-08 61.2 85 35.3
Ah.06g191780 Amaranthus hybridus HOM05D000953 ORTHO05D000231 1.2e-07 60.8 77 35.1
AagrBONN_evm.TU.Sc2ySwM_117.2564 Anthoceros agrestis HOM05D000953 ORTHO05D019590 1.2e-07 60.8 77 33.8
C03p06170 Brassica napus HOM05D000953 ORTHO05D000231 1.2e-07 60.8 85 34.1
BolC3t13124H Brassica oleracea HOM05D000953 ORTHO05D000231 1.2e-07 60.8 85 34.1
MELO3C032348.2 Cucumis melo HOM05D000953 ORTHO05D000231 1.2e-07 60.8 77 36.4
CsaV3_4G035840 Cucumis sativus L. HOM05D000953 ORTHO05D000231 1.2e-07 60.8 77 36.4
THA.LOC104824632 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 1.2e-07 60.8 85 32.9
A10p25750 Brassica napus HOM05D000953 ORTHO05D000231 1.5e-07 60.5 85 34.1
C09p64840 Brassica napus HOM05D000953 ORTHO05D000231 1.5e-07 60.5 85 34.1
BolC9t59315H Brassica oleracea HOM05D000953 ORTHO05D000231 1.5e-07 60.5 85 34.1
TPR.G38922 Trifolium pratense HOM05D000953 ORTHO05D000231 1.5e-07 60.5 85 35.3
Ah.04g163080 Amaranthus hybridus HOM05D000953 ORTHO05D000231 2.0e-07 60.1 73 38.4
BcaC03g13406 Brassica carinata HOM05D000953 ORTHO05D000231 2.0e-07 60.1 77 36.4
A01p08380 Brassica napus HOM05D000953 ORTHO05D000231 2.0e-07 60.1 85 29.4
A02p01330 Brassica napus HOM05D000953 ORTHO05D000231 2.0e-07 60.1 77 36.4
C01p09420 Brassica napus HOM05D000953 ORTHO05D000231 2.0e-07 60.1 85 29.4
C02p05560 Brassica napus HOM05D000953 ORTHO05D000231 2.0e-07 60.1 77 36.4
BolC1t00930H Brassica oleracea HOM05D000953 ORTHO05D000231 2.0e-07 60.1 85 29.4
BolC2t06500H Brassica oleracea HOM05D000953 ORTHO05D000231 2.0e-07 60.1 77 36.4
BraA01t00786Z Brassica rapa HOM05D000953 ORTHO05D000231 2.0e-07 60.1 85 29.4
BraA02t05112Z Brassica rapa HOM05D000953 ORTHO05D000231 2.0e-07 60.1 77 36.4
AUR62000408 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-07 60.1 85 34.1
Sp7g27590 Schrenkiella parvula HOM05D000953 ORTHO05D000231 2.0e-07 60.1 85 29.4
A03p38810 Brassica napus HOM05D000953 ORTHO05D000231 2.6e-07 59.7 77 36.4
BraA03t13028Z Brassica rapa HOM05D000953 ORTHO05D000231 2.6e-07 59.7 77 36.4
CARHR237680 Cardamine hirsuta HOM05D000953 ORTHO05D000231 2.6e-07 59.7 85 29.4
Ca_13131_v3 Cicer arietinum L. HOM05D000953 ORTHO05D000231 2.6e-07 59.7 73 35.6
EL10Ac4g09480 Beta vulgaris HOM05D000953 ORTHO05D000231 3.4e-07 59.3 77 36.4
BraA10t44641Z Brassica rapa HOM05D000953 ORTHO05D000231 3.4e-07 59.3 85 32.9
AUR62000410 Chenopodium quinoa HOM05D000953 ORTHO05D000231 3.4e-07 59.3 85 34.1
COL.COLO4_21098 Corchorus olitorius HOM05D000953 ORTHO05D000231 3.4e-07 59.3 77 35.1
Duzib150G0905 Durio zibethinus HOM05D000953 ORTHO05D000231 3.4e-07 59.3 77 35.1
Duzib168G2279 Durio zibethinus HOM05D000953 ORTHO05D000231 3.4e-07 59.3 77 35.1
Sabra06G0174100 Salix brachista HOM05D000953 ORTHO05D000231 3.4e-07 59.3 77 35.1
AL6G22800 Arabidopsis lyrata HOM05D000953 ORTHO05D000231 4.4e-07 58.9 77 35.1
AT5G12010 Arabidopsis thaliana HOM05D000953 ORTHO05D000231 4.4e-07 58.9 77 35.1
HanXRQChr12g0359121 Helianthus annuus HOM05D000953 ORTHO05D000231 4.4e-07 58.9 85 32.9
Psat6g023720 Pisum sativum HOM05D000953 ORTHO05D000231 4.4e-07 58.9 85 32.9
AL7G22470 Arabidopsis lyrata HOM05D000953 ORTHO05D000231 5.7e-07 58.5 85 28.2
AT4G29780 Arabidopsis thaliana HOM05D000953 ORTHO05D000231 5.7e-07 58.5 85 28.2
arahy.Tifrunner.gnm1.ann1.RU0HW5 Arachis hypogaea HOM05D000953 ORTHO05D000231 5.7e-07 58.5 85 32.9
arahy.Tifrunner.gnm1.ann1.URH2DX Arachis hypogaea HOM05D000953 ORTHO05D000231 5.7e-07 58.5 85 32.9
BcaB01g05435 Brassica carinata HOM05D000953 ORTHO05D000231 5.7e-07 58.5 77 35.1
Cpa.g.sc7.152 Carica papaya HOM05D000953 ORTHO05D000231 5.7e-07 58.5 85 32.9
VMungo1309G2253 Vigna mungo HOM05D000953 ORTHO05D000231 5.7e-07 58.5 85 29.4
Ca_13099_v3 Cicer arietinum L. HOM05D000953 ORTHO05D000231 7.5e-07 58.2 85 31.8
Lj4P290T12 Lonicera japonica HOM05D000953 ORTHO05D000231 9.8e-07 57.8 85 30.6
THA.LOC104814633 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 9.8e-07 57.8 85 28.2
Os05g0183900 Oryza sativa ssp. japonica HOM05D000953 ORTHO05D000231 1.3e-06 57.4 72 36.1
Sc08g0008620 Simmondsia chinensis HOM05D000953 ORTHO05D000231 1.3e-06 57.4 85 31.8
Lsat_1_v5_gn_7_34620 Lactuca sativa HOM05D000953 ORTHO05D000231 1.7e-06 57.0 85 31.8
TWI32G0762 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 1.7e-06 57.0 72 37.5
PSO063G1421 Papaver somniferum HOM05D000953 ORTHO05D000231 2.2e-06 56.6 77 31.2
PSO832G1360 Papaver somniferum HOM05D000953 ORTHO05D000231 2.2e-06 56.6 77 31.2
Psat4g016600 Pisum sativum HOM05D000953 ORTHO05D000231 2.2e-06 56.6 85 28.2
Sp6g31580 Schrenkiella parvula HOM05D000953 ORTHO05D000231 2.2e-06 56.6 77 33.8
Sc23g0005770 Simmondsia chinensis HOM05D000953 ORTHO05D000231 2.2e-06 56.6 73 35.6
Aqoxy7G01147 Aquilegia oxysepala HOM05D000953 ORTHO05D000231 2.8e-06 56.2 77 32.5
Lj5g0005120 Lotus japonicus HOM05D000953 ORTHO05D000231 2.8e-06 56.2 73 35.6
THA.LOC104803964 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 2.8e-06 56.2 84 28.6
CDE04G1957 Ceratophyllum demersum HOM05D000953 ORTHO05D010501 3.7e-06 55.8 74 35.1
Prupe.7G205200 Prunus persica HOM05D000953 ORTHO05D000231 4.9e-06 55.5 85 29.4
TPR.G35978 Trifolium pratense HOM05D000953 ORTHO05D000231 4.9e-06 55.5 85 31.8
MSTRG.20167 Avicennia marina HOM05D000953 ORTHO05D010501 6.3e-06 55.1 67 34.3
Lalb_Chr22g0349631 Lupinus albus HOM05D000953 ORTHO05D000231 6.3e-06 55.1 73 34.2
Rhsim05G0014900 Rhododendron simsii HOM05D000953 ORTHO05D000231 6.3e-06 55.1 77 32.5
Lalb_Chr07g0180951 Lupinus albus HOM05D000953 ORTHO05D000231 8.3e-06 54.7 85 28.2


User provided reference genes

Program Settings