Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.7e-23 110.5 51 100.0
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.2e-13 79.0 40 87.5
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.3e-10 68.9 40 72.5
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 5.3e-09 63.5 40 65.0
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 5.3e-09 63.5 40 67.5
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 5.3e-09 63.5 40 67.5
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 5.3e-09 63.5 40 70.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.2e-08 62.4 40 70.0
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.5e-08 62.0 40 70.0
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 2.0e-08 61.6 40 70.0
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 2.6e-08 61.2 40 70.0
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.4e-08 60.8 40 67.5
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 65.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 65.0
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 70.0
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 67.5
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 67.5
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 67.5
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 67.5
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 4.4e-08 60.5 40 67.5
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 5.8e-08 60.1 40 67.5
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 7.6e-08 59.7 40 67.5
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 7.6e-08 59.7 40 65.0
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 7.6e-08 59.7 40 62.5
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 7.6e-08 59.7 40 67.5
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 7.6e-08 59.7 40 67.5
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 9.9e-08 59.3 40 67.5
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 9.9e-08 59.3 40 67.5
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 9.9e-08 59.3 40 65.0
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 9.9e-08 59.3 40 65.0
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 67.5
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 67.5
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 67.5
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 67.5
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 67.5
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 67.5
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.3e-07 58.9 40 65.0
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.7e-07 58.5 40 67.5
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 1.7e-07 58.5 40 65.0
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.7e-07 58.5 40 67.5
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.7e-07 58.5 40 67.5
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.7e-07 58.5 40 65.0
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.7e-07 58.5 40 65.0
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 62.5
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 2.2e-07 58.2 38 65.8
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 67.5
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 62.5
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 62.5
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 62.5
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.2e-07 58.2 40 65.0
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 2.9e-07 57.8 40 65.0
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 2.9e-07 57.8 40 65.0
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 2.9e-07 57.8 40 65.0
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 2.9e-07 57.8 40 62.5
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 2.9e-07 57.8 40 65.0
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 2.9e-07 57.8 40 62.5
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 3.8e-07 57.4 40 62.5
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 3.8e-07 57.4 40 62.5
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 3.8e-07 57.4 40 62.5
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 3.8e-07 57.4 40 65.0
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 3.8e-07 57.4 40 60.0
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 62.5
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 62.5
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 62.5
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 62.5
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 62.5
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 65.0
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 4.9e-07 57.0 40 62.5
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 65.0
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 6.4e-07 56.6 38 65.8
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 62.5
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 62.5
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 62.5
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 62.5
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 62.5
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 6.4e-07 56.6 40 62.5
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 8.4e-07 56.2 40 60.0
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.4e-07 56.2 40 60.0
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.4e-07 56.2 40 60.0
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 8.4e-07 56.2 40 65.0
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 8.4e-07 56.2 40 62.5
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 1.1e-06 55.8 40 65.0
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 1.4e-06 55.5 33 72.7
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 1.4e-06 55.5 40 60.0
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.9e-06 55.1 40 60.0
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 1.9e-06 55.1 40 60.0
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.9e-06 55.1 40 62.5
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.9e-06 55.1 40 60.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 2.4e-06 54.7 39 61.5
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 2.4e-06 54.7 40 60.0
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.2e-06 53.9 40 57.5
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 4.2e-06 53.9 40 60.0
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.1e-06 53.1 40 62.5
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.1e-06 53.1 40 57.5
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 7.1e-06 53.1 40 60.0


User provided reference genes

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