Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.2e-65 253.1 128 100.0
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.6e-51 206.1 106 99.1
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.6e-51 206.1 106 99.1
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 6.1e-46 187.6 128 73.4
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.3e-43 179.9 119 72.3
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 5.3e-42 174.5 123 70.7
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 6.9e-42 174.1 123 70.7
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 6.9e-42 174.1 123 70.7
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 6.9e-42 174.1 126 69.0
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 6.9e-42 174.1 128 64.8
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 9.0e-42 173.7 125 68.0
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 1.2e-41 173.3 118 72.0
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 1.5e-41 172.9 126 68.3
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 4.5e-41 171.4 128 64.8
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 4.5e-41 171.4 126 67.5
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 4.5e-41 171.4 126 67.5
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 5.9e-41 171.0 118 70.3
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 5.9e-41 171.0 126 67.5
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 5.9e-41 171.0 126 66.7
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 7.7e-41 170.6 128 65.6
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 1.0e-40 170.2 121 68.6
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.0e-40 170.2 125 67.2
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 1.3e-40 169.9 128 66.4
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.3e-40 169.9 126 65.1
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.3e-40 169.9 126 67.5
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 1.3e-40 169.9 121 69.4
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 1.3e-40 169.9 128 64.8
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 1.3e-40 169.9 128 67.2
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.7e-40 169.5 125 65.6
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 2.2e-40 169.1 118 67.8
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 2.2e-40 169.1 125 65.6
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 2.9e-40 168.7 125 66.4
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 3.8e-40 168.3 127 65.4
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 3.8e-40 168.3 127 65.4
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 3.8e-40 168.3 127 65.4
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 3.8e-40 168.3 127 65.4
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 3.8e-40 168.3 128 64.1
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 6.5e-40 167.5 121 69.4
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 6.5e-40 167.5 127 65.4
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 6.5e-40 167.5 128 64.8
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 8.5e-40 167.2 127 65.4
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 8.5e-40 167.2 127 64.6
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 8.5e-40 167.2 126 64.3
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 8.5e-40 167.2 126 66.7
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 8.5e-40 167.2 124 68.5
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.1e-39 166.8 119 68.1
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-39 166.8 125 64.8
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 1.1e-39 166.8 118 68.6
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.4e-39 166.4 124 64.5
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.4e-39 166.4 126 65.9
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 1.4e-39 166.4 123 65.0
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 1.4e-39 166.4 124 65.3
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 1.9e-39 166.0 126 65.1
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 1.9e-39 166.0 126 65.1
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 1.9e-39 166.0 124 64.5
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 1.9e-39 166.0 123 67.5
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.5e-39 165.6 124 64.5
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 2.5e-39 165.6 120 68.3
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 3.2e-39 165.2 130 63.1
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 3.2e-39 165.2 128 64.8
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 3.2e-39 165.2 126 65.1
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 3.2e-39 165.2 120 67.5
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 3.2e-39 165.2 124 62.9
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 3.2e-39 165.2 126 64.3
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 4.2e-39 164.9 124 65.3
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 4.2e-39 164.9 118 67.8
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 4.2e-39 164.9 124 66.1
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 4.2e-39 164.9 128 64.1
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 5.5e-39 164.5 128 64.1
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 5.5e-39 164.5 127 65.4
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 5.5e-39 164.5 121 66.1
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 7.2e-39 164.1 119 70.6
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 7.2e-39 164.1 124 65.3
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 7.2e-39 164.1 126 63.5
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 9.4e-39 163.7 128 64.1
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 1.6e-38 162.9 127 64.6
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 1.6e-38 162.9 127 64.6
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 1.6e-38 162.9 124 65.3
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 2.1e-38 162.5 127 63.8
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 2.1e-38 162.5 127 63.8
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 2.1e-38 162.5 127 63.8
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 2.1e-38 162.5 123 63.4
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 2.1e-38 162.5 124 66.9
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.7e-38 162.2 125 64.0
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 3.6e-38 161.8 128 61.7
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 3.6e-38 161.8 126 61.9
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 3.6e-38 161.8 124 65.3
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 4.6e-38 161.4 121 65.3
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 6.1e-38 161.0 124 63.7
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 6.1e-38 161.0 121 65.3
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 2.3e-37 159.1 113 67.3
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 2.3e-37 159.1 129 63.6
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 5.1e-37 157.9 126 61.9
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 8.8e-37 157.1 126 61.9
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.5e-36 156.4 126 61.1
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 2.5e-36 155.6 126 62.7
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 4.3e-36 154.8 129 61.2
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 2.2e-35 152.5 128 58.6
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 1.8e-34 149.4 148 54.1
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 3.1e-34 148.7 127 60.6
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 1.5e-33 146.4 124 63.7
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 1.7e-27 126.3 125 54.4
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 1.5e-25 119.8 124 50.8
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 2.0e-25 119.4 124 50.8
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.2e-19 99.4 123 47.2
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 2.4e-18 95.9 69 68.1
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 9.1e-18 94.0 105 50.5
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 1.3e-16 90.1 71 62.0
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 5.0e-16 88.2 60 76.7
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 6.5e-16 87.8 69 62.3
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 3.2e-15 85.5 69 59.4
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.3e-13 79.3 77 53.2
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 1.2e-06 57.0 43 67.4


User provided reference genes

Program Settings