Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 3.5e-152 541.6 270 100.0
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 6.9e-100 367.9 300 65.7
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 6.1e-80 301.6 217 74.2
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.7e-21 107.5 235 34.5
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.2e-16 91.3 228 32.5
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 6.8e-15 85.5 234 30.3
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 2.6e-14 83.6 228 30.3
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 2.2e-13 80.5 225 30.7
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 8.4e-13 78.6 227 30.0
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 1.1e-12 78.2 223 28.7
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 1.4e-12 77.8 227 29.5
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 4.1e-12 76.3 234 30.3
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 4.1e-12 76.3 231 29.0
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.2e-11 74.7 225 31.6
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.2e-11 74.7 225 31.6
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 1.2e-11 74.7 223 29.6
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 1.6e-11 74.3 228 29.8
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 1.6e-11 74.3 232 29.3
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 1.6e-11 74.3 232 29.3
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 2.1e-11 73.9 236 29.7
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 2.7e-11 73.6 223 29.1
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 2.7e-11 73.6 225 31.1
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 2.7e-11 73.6 224 28.6
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 3.5e-11 73.2 224 29.9
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 4.6e-11 72.8 234 28.6
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 4.6e-11 72.8 234 27.8
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 7.8e-11 72.0 228 28.9
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.0e-10 71.6 224 28.6
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 1.0e-10 71.6 204 30.9
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 1.0e-10 71.6 234 29.5
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.0e-10 71.6 234 29.9
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.0e-10 71.6 231 29.9
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 1.7e-10 70.9 223 28.7
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.7e-10 70.9 223 29.1
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 1.7e-10 70.9 229 28.8
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 1.7e-10 70.9 233 28.8
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.7e-10 70.9 230 30.9
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 2.3e-10 70.5 223 29.1
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 2.3e-10 70.5 234 27.8
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 2.3e-10 70.5 227 28.6
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 3.0e-10 70.1 223 27.4
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 3.0e-10 70.1 223 30.9
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 3.9e-10 69.7 233 28.3
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.9e-10 69.7 234 29.9
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 3.9e-10 69.7 221 29.9
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 5.1e-10 69.3 231 28.6
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 5.1e-10 69.3 234 28.6
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 6.6e-10 68.9 233 27.9
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 8.6e-10 68.6 223 29.1
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 8.6e-10 68.6 224 29.0
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 8.6e-10 68.6 233 28.8
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 1.1e-09 68.2 230 29.6
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 1.1e-09 68.2 221 27.6
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.5e-09 67.8 230 26.5
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.9e-09 67.4 239 26.8
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 1.9e-09 67.4 235 26.0
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.9e-09 67.4 231 27.7
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.9e-09 67.4 223 29.6
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 1.9e-09 67.4 231 27.3
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 2.5e-09 67.0 225 28.9
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 2.5e-09 67.0 225 29.3
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 3.3e-09 66.6 234 26.5
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 3.3e-09 66.6 223 29.1
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 3.3e-09 66.6 223 29.6
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.3e-09 66.6 209 31.1
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.3e-09 66.6 238 28.2
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 4.3e-09 66.2 223 29.6
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 4.3e-09 66.2 202 29.7
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 4.3e-09 66.2 189 30.7
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 5.6e-09 65.9 225 27.1
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 5.6e-09 65.9 221 26.7
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 7.3e-09 65.5 227 27.8
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 9.6e-09 65.1 234 26.5
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 9.6e-09 65.1 234 26.5
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 9.6e-09 65.1 229 29.7
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 1.2e-08 64.7 224 28.6
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.2e-08 64.7 223 29.1
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 1.6e-08 64.3 233 26.2
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 1.6e-08 64.3 233 26.2
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.1e-08 63.9 235 26.4
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 2.8e-08 63.5 234 27.4
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 2.8e-08 63.5 232 28.9
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 2.8e-08 63.5 226 28.3
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 2.8e-08 63.5 234 26.1
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 3.6e-08 63.2 222 25.2
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 3.6e-08 63.2 229 27.9
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 4.7e-08 62.8 241 27.0
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 4.7e-08 62.8 232 26.3
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 6.2e-08 62.4 230 28.7
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 8.1e-08 62.0 235 26.4
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.1e-07 61.6 223 29.1
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.1e-07 61.6 229 27.1
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 1.1e-07 61.6 232 28.0
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 1.8e-07 60.8 223 26.5
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 1.8e-07 60.8 227 26.4
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 2.4e-07 60.5 224 28.6
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 2.4e-07 60.5 231 28.6
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 3.1e-07 60.1 226 27.9
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 4.0e-07 59.7 232 28.4
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 5.2e-07 59.3 225 26.7
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 6.8e-07 58.9 225 27.1
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 8.9e-07 58.5 181 26.0
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 1.5e-06 57.8 225 26.7
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 2.0e-06 57.4 260 26.5
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 3.4e-06 56.6 226 28.3
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 3.4e-06 56.6 198 28.3
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 5.8e-06 55.8 239 25.9


User provided reference genes

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