Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.1e-172 609.8 298 100.0
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.7e-153 545.4 350 80.6
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 7.9e-65 251.5 352 40.9
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.0e-59 234.6 354 38.7
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 8.5e-59 231.5 357 37.8
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 7.2e-58 228.4 357 37.5
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 7.2e-58 228.4 357 37.8
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.2e-57 227.6 357 38.4
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.7e-57 226.5 356 37.1
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.4e-56 224.2 368 36.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 2.3e-56 223.4 356 36.5
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 6.7e-56 221.9 356 36.2
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 8.8e-56 221.5 357 37.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.1e-55 221.1 356 36.0
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 2.6e-55 219.9 319 37.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 3.3e-55 219.5 357 35.3
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 3.3e-55 219.5 358 36.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 5.7e-55 218.8 359 35.9
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 7.5e-55 218.4 357 36.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 9.7e-55 218.0 355 36.3
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.7e-54 217.2 358 36.3
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.7e-54 217.2 353 37.1
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 2.2e-54 216.9 357 36.1
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.7e-54 216.1 358 36.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.7e-54 216.1 345 36.8
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.8e-54 215.7 358 35.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 6.3e-54 215.3 357 36.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.1e-53 214.5 369 34.1
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.1e-53 214.5 356 36.2
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.8e-53 213.8 357 37.0
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 4.1e-53 212.6 359 35.7
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 4.1e-53 212.6 357 34.7
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.3e-53 212.2 359 35.4
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.6e-52 210.7 357 34.2
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 3.5e-52 209.5 363 36.1
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.3e-51 207.6 361 34.3
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.9e-51 206.5 390 32.6
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.5e-50 204.1 361 34.6
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.9e-50 203.8 358 32.7
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.5e-50 203.4 358 34.9
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.5e-50 203.4 358 34.1
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.1e-49 200.3 356 34.0
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 8.0e-49 198.4 360 33.1
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.4e-48 197.6 357 34.2
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.3e-48 196.8 357 34.2
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.3e-48 196.8 365 34.0
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 3.0e-48 196.4 365 33.7
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.8e-48 195.3 365 33.7
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.5e-47 194.1 367 32.2
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.5e-47 194.1 365 32.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.5e-47 194.1 345 35.7
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.5e-47 194.1 345 35.7
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.5e-47 194.1 345 35.7
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.0e-47 193.7 356 33.7
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 3.4e-47 193.0 358 32.1
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.4e-47 192.6 421 30.2
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 9.8e-47 191.4 364 32.7
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 9.8e-47 191.4 366 32.8
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.2e-46 190.3 421 29.9
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 8.3e-46 188.3 366 34.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 8.3e-46 188.3 456 29.6
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 3.1e-45 186.4 337 33.5
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 2.7e-41 173.3 224 43.3
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.3e-38 164.5 227 43.2
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.8e-37 160.6 257 37.4
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 4.5e-36 156.0 326 34.0
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 4.5e-36 156.0 362 29.6
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.9e-34 150.6 462 28.4
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.8e-32 144.1 240 36.7
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 9.2e-29 131.7 300 29.7
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.4e-23 113.2 148 42.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.3e-22 111.3 196 34.7
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 2.9e-22 110.2 216 35.2
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 4.9e-22 109.4 115 47.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.0e-20 102.4 124 44.4
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 5.0e-19 99.4 231 28.1
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.5e-18 97.8 372 26.3
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.9e-18 97.4 422 23.2
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.2e-17 94.7 124 43.5
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 8.1e-17 92.0 162 32.7
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.1e-16 91.7 89 51.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 8.9e-16 88.6 105 42.9
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.8e-15 85.9 76 44.7
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.3e-14 84.7 75 44.0
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.3e-14 84.7 75 49.3
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.9e-13 80.9 75 41.3
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.9e-13 80.9 75 41.3
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.0e-11 75.1 74 43.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 5.6e-10 69.3 113 34.5
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-09 68.2 99 37.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 5.2e-08 62.8 66 43.9
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.8e-08 62.4 110 34.5
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 5.8e-07 59.3 53 49.1
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.3e-06 58.2 54 50.0
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.2e-06 57.4 179 28.5
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 8.4e-06 55.5 53 54.7


User provided reference genes

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