Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO228G0152 Selaginella moellendorffii HOM05D002994 ORTHO05D003337 1.7e-49 199.1 111 100.0
Mapoly0132s0020 Marchantia polymorpha HOM05D002994 ORTHO05D003337 1.3e-23 113.2 114 59.6
AagrBONN_evm.TU.Sc2ySwM_117.294 Anthoceros agrestis HOM05D002994 ORTHO05D003337 5.3e-22 107.8 114 58.8
CBR_g41090 Chara braunii HOM05D002994 ORTHO05D003337 2.1e-18 95.9 114 50.9
SEGI_02150 Sequoiadendron giganteum HOM05D002994 ORTHO05D003337 3.5e-18 95.1 114 51.8
Oeu007687.2 Olea europaea HOM05D002994 ORTHO05D003337 3.9e-17 91.7 114 48.2
Migut.F02068 Erythranthe guttata HOM05D002994 ORTHO05D003337 1.1e-16 90.1 114 48.2
Duzib177G0745 Durio zibethinus HOM05D002994 ORTHO05D003337 3.3e-16 88.6 114 46.5
Gohir.A08G218300 Gossypium hirsutum HOM05D002994 ORTHO05D003337 3.3e-16 88.6 111 48.6
MSTRG.9226 Avicennia marina HOM05D002994 ORTHO05D003337 2.8e-15 85.5 114 47.4
ATR0561G058 Amborella trichopoda HOM05D002994 ORTHO05D003337 3.7e-15 85.1 114 45.6
FAN27G0312 Fragaria x ananassa HOM05D002994 ORTHO05D003337 3.7e-15 85.1 114 46.5
Gohir.D11G250500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 3.7e-15 85.1 114 46.5
Gorai.007G268600 Gossypium raimondii HOM05D002994 ORTHO05D003337 3.7e-15 85.1 114 46.5
FAN15G1600 Fragaria x ananassa HOM05D002994 ORTHO05D003337 6.3e-15 84.3 114 45.6
Phvul.011G018900 Phaseolus vulgaris HOM05D002994 ORTHO05D003337 6.3e-15 84.3 113 46.0
Sabra19G0037200 Salix brachista HOM05D002994 ORTHO05D003337 8.2e-15 84.0 114 45.6
Sabra19G0039700 Salix brachista HOM05D002994 ORTHO05D003337 8.2e-15 84.0 114 45.6
CiPaw.09G139200 Carya illinoinensis HOM05D002994 ORTHO05D003337 1.8e-14 82.8 114 45.6
FvH4_2g21680 Fragaria vesca HOM05D002994 ORTHO05D003337 2.4e-14 82.4 114 45.6
FAN24G2383 Fragaria x ananassa HOM05D002994 ORTHO05D003337 2.4e-14 82.4 114 45.6
MD10G1185200 Malus domestica HOM05D002994 ORTHO05D003337 2.4e-14 82.4 114 44.7
QL02p017328 Quercus lobata HOM05D002994 ORTHO05D003337 2.4e-14 82.4 114 46.5
Gorai.004G250100 Gossypium raimondii HOM05D002994 ORTHO05D003337 3.1e-14 82.0 114 44.7
CsaV3_3G022500 Cucumis sativus L. HOM05D002994 ORTHO05D003337 4.1e-14 81.6 114 45.6
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 5.3e-14 81.3 113 42.5
Ca_18953_v3 Cicer arietinum L. HOM05D002994 ORTHO05D003337 5.3e-14 81.3 113 44.2
MELO3C012902.2 Cucumis melo HOM05D002994 ORTHO05D003337 5.3e-14 81.3 114 45.6
Lj2C51T6 Lonicera japonica HOM05D002994 ORTHO05D003337 6.9e-14 80.9 114 43.9
RcHm_v2.0_Chr6g0288361 Rosa chinensis HOM05D002994 ORTHO05D003337 6.9e-14 80.9 114 44.7
Sed0012175 Sechium edule HOM05D002994 ORTHO05D003337 6.9e-14 80.9 114 44.7
Carub.0001s0789 Capsella rubella HOM05D002994 ORTHO05D003337 9.0e-14 80.5 114 43.0
TPR.G19622 Trifolium pratense HOM05D002994 ORTHO05D003337 9.0e-14 80.5 113 43.4
Peaxi162Scf00215g00114 Petunia axillaris HOM05D002994 ORTHO05D003337 1.2e-13 80.1 114 45.6
Prupe.8G225000 Prunus persica HOM05D002994 ORTHO05D003337 1.2e-13 80.1 114 43.9
Atru.chr2.1245 Acer truncatum HOM05D002994 ORTHO05D003337 1.5e-13 79.7 114 45.6
Eucgr.H04156 Eucalyptus grandis HOM05D002994 ORTHO05D003337 2.0e-13 79.3 114 45.6
Gohir.D08G235500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 2.0e-13 79.3 114 44.7
Potri.019G030400 Populus trichocarpa HOM05D002994 ORTHO05D003337 2.0e-13 79.3 114 43.9
Sp1g07190 Schrenkiella parvula HOM05D002994 ORTHO05D003337 2.0e-13 79.3 114 43.0
Medtr4g078130 Medicago truncatula HOM05D002994 ORTHO05D003337 2.6e-13 79.0 113 42.5
Psat7g170080 Pisum sativum HOM05D002994 ORTHO05D003337 2.6e-13 79.0 112 43.8
Cc09_g03220 Coffea canephora HOM05D002994 ORTHO05D003337 3.4e-13 78.6 114 43.0
Thecc.05G260600 Theobroma cacao HOM05D002994 ORTHO05D003337 3.4e-13 78.6 114 43.9
HPP92_021426 Vanilla planifolia HOM05D002994 ORTHO05D003337 3.4e-13 78.6 113 45.1
AT1G08530 Arabidopsis thaliana HOM05D002994 ORTHO05D003337 4.5e-13 78.2 114 41.2
Potri.013G052700 Populus trichocarpa HOM05D002994 ORTHO05D003337 4.5e-13 78.2 114 43.0
Nitab4.5_0000344g0060 Nicotiana tabacum HOM05D002994 ORTHO05D003337 5.9e-13 77.8 114 44.7
CARHR008430 Cardamine hirsuta HOM05D002994 ORTHO05D003337 7.6e-13 77.4 114 41.2
Lalb_Chr03g0024371 Lupinus albus HOM05D002994 ORTHO05D003337 7.6e-13 77.4 113 40.7
Solyc04g051120.4 Solanum lycopersicum HOM05D002994 ORTHO05D003337 7.6e-13 77.4 114 45.6
C05p06630 Brassica napus HOM05D002994 ORTHO05D003337 1.0e-12 77.0 114 41.2
AUR62000658 Chenopodium quinoa HOM05D002994 ORTHO05D003337 1.0e-12 77.0 114 43.9
Duzib128G2066 Durio zibethinus HOM05D002994 ORTHO05D003337 1.0e-12 77.0 114 43.9
Prupe.1G354200 Prunus persica HOM05D002994 ORTHO05D003337 1.0e-12 77.0 114 43.0
QL05p081668 Quercus lobata HOM05D002994 ORTHO05D003337 1.0e-12 77.0 114 44.7
Aa31sc1107G10 Aethionema arabicum HOM05D002994 ORTHO05D003337 1.3e-12 76.6 114 43.0
AL1G18960 Arabidopsis lyrata HOM05D002994 ORTHO05D003337 1.3e-12 76.6 114 40.4
Glyma.11G108700 Glycine max HOM05D002994 ORTHO05D003337 1.3e-12 76.6 113 44.2
PSO063G0038 Papaver somniferum HOM05D002994 ORTHO05D003337 1.3e-12 76.6 114 43.9
Hund07151 Selenicereus undatus HOM05D002994 ORTHO05D003337 1.7e-12 76.3 114 43.9
Sopen04g022430 Solanum pennellii HOM05D002994 ORTHO05D003337 1.7e-12 76.3 114 44.7
GSVIVG01026377001 Vitis vinifera HOM05D002994 ORTHO05D003337 1.7e-12 76.3 114 43.0
BcaB07g34096 Brassica carinata HOM05D002994 ORTHO05D003337 2.9e-12 75.5 114 40.4
BolC5t29423H Brassica oleracea HOM05D002994 ORTHO05D003337 2.9e-12 75.5 114 40.4
BraA06t23760Z Brassica rapa HOM05D002994 ORTHO05D003337 2.9e-12 75.5 114 40.4
Aqoxy2G04007 Aquilegia oxysepala HOM05D002994 ORTHO05D003337 3.8e-12 75.1 112 43.8
A06p05520 Brassica napus HOM05D002994 ORTHO05D003337 3.8e-12 75.1 114 40.4
Cpa.g.sc51.69 Carica papaya HOM05D002994 ORTHO05D003337 3.8e-12 75.1 114 43.0
Ciclev10021599m.g Citrus clementina HOM05D002994 ORTHO05D003337 5.0e-12 74.7 114 43.0
TAR633G1434 Trochodendron aralioides HOM05D002994 ORTHO05D003337 5.0e-12 74.7 92 48.9
PSO017G4550 Papaver somniferum HOM05D002994 ORTHO05D003337 6.5e-12 74.3 114 42.1
PGR004G1910 Punica granatum HOM05D002994 ORTHO05D003337 6.5e-12 74.3 114 43.0
Dinv03229 Davidia involucrata HOM05D002994 ORTHO05D003337 8.5e-12 73.9 112 42.9
Lj3g0016982 Lotus japonicus HOM05D002994 ORTHO05D003337 1.9e-11 72.8 113 39.8
Thhalv10008466m.g Eutrema salsugineum HOM05D002994 ORTHO05D003337 2.5e-11 72.4 114 40.4
CSS0027841 Camellia sinensis var. sinensis HOM05D002994 ORTHO05D003337 3.2e-11 72.0 114 43.0
Pp3c21_1120 Physcomitrium patens HOM05D002994 ORTHO05D003337 5.5e-11 71.2 114 39.5
MSTRG.27426 Avicennia marina HOM05D002994 ORTHO05D003337 7.2e-11 70.9 114 41.2
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 7.2e-11 70.9 114 43.0
Manes.09G144700 Manihot esculenta HOM05D002994 ORTHO05D003337 7.2e-11 70.9 114 42.1
Sc09g0001740 Simmondsia chinensis HOM05D002994 ORTHO05D003337 9.4e-11 70.5 111 43.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.2e-10 70.1 113 38.9
EL10Ac4g09801 Beta vulgaris HOM05D002994 ORTHO05D003337 1.2e-10 70.1 112 41.1
CANSAT01G0680 Cannabis sativa HOM05D002994 ORTHO05D003337 1.6e-10 69.7 114 39.5
Nitab4.5_0003944g0060 Nicotiana tabacum HOM05D002994 ORTHO05D003337 1.6e-10 69.7 124 41.9
Pp3c19_6090 Physcomitrium patens HOM05D002994 ORTHO05D003337 1.6e-10 69.7 114 43.0
HanXRQChr05g0139071 Helianthus annuus HOM05D002994 ORTHO05D003337 2.1e-10 69.3 114 38.6
ECA233G1668 Erigeron canadensis HOM05D002994 ORTHO05D003337 3.6e-10 68.6 114 38.6
TWI34G0844 Tripterygium wilfordii HOM05D002994 ORTHO05D003337 3.6e-10 68.6 114 39.5
PGSC0003DMG401023121 Solanum tuberosum HOM05D002994 ORTHO05D003337 1.0e-09 67.0 73 53.4
vmacro11037 Vaccinium macrocarpon HOM05D002994 ORTHO05D003337 2.3e-09 65.9 115 40.9
Lsat_1_v5_gn_8_3301 Lactuca sativa HOM05D002994 ORTHO05D003337 2.5e-08 62.4 114 39.5
Rhsim02G0173800 Rhododendron simsii HOM05D002994 ORTHO05D003337 3.3e-08 62.0 72 51.4
Haze_05231 Corylus avellana HOM05D002994 ORTHO05D003337 4.3e-08 61.6 139 36.7
TAR633G0952 Trochodendron aralioides HOM05D002994 ORTHO05D003337 5.7e-08 61.2 73 47.9
Nn1g07964 Nelumbo nucifera HOM05D002994 ORTHO05D003337 9.7e-08 60.5 114 36.8
Actinidia29397 Actinidia chinensis HOM05D002994 ORTHO05D003337 2.8e-07 58.9 114 36.8
MD05G1199200 Malus domestica HOM05D002994 ORTHO05D003337 8.2e-07 57.4 70 47.1
THA.LOC104821131 Tarenaya hassleriana HOM05D002994 ORTHO05D003337 1.4e-06 56.6 77 45.5


User provided reference genes

Program Settings