Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 6.7e-119 430.6 210 100.0
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 1.9e-76 289.7 206 63.6
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 5.4e-76 288.1 204 62.7
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.6e-75 286.6 204 60.8
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 2.1e-75 286.2 204 61.8
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 1.3e-74 283.5 204 60.8
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 2.3e-74 282.7 204 60.8
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 2.3e-74 282.7 205 62.4
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 3.9e-74 282.0 207 61.4
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 3.9e-74 282.0 204 60.8
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 6.6e-74 281.2 204 59.3
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 8.6e-74 280.8 204 59.3
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 1.5e-73 280.0 204 60.8
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 1.5e-73 280.0 203 59.6
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 1.9e-73 279.6 204 59.3
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 3.3e-73 278.9 204 60.3
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 7.3e-73 277.7 204 60.8
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 7.3e-73 277.7 204 60.3
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 9.5e-73 277.3 205 61.5
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 2.1e-72 276.2 207 60.9
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 2.8e-72 275.8 206 59.7
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 4.7e-72 275.0 204 58.8
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 8.1e-72 274.2 205 61.0
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 1.1e-71 273.9 204 59.3
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 3.1e-71 272.3 204 60.3
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 3.1e-71 272.3 206 58.7
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 6.8e-71 271.2 204 58.3
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 8.9e-71 270.8 204 59.8
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 1.2e-70 270.4 204 57.8
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 1.5e-70 270.0 204 58.8
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 2.0e-70 269.6 204 58.8
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.6e-70 269.2 204 57.8
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 2.6e-70 269.2 204 57.8
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 2.6e-70 269.2 204 58.3
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 3.4e-70 268.9 204 57.8
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 3.4e-70 268.9 203 58.1
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 4.4e-70 268.5 215 57.7
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 5.8e-70 268.1 207 59.4
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 7.5e-70 267.7 204 56.4
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 7.5e-70 267.7 204 59.8
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 9.9e-70 267.3 204 57.4
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 2.2e-69 266.2 204 57.4
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 2.2e-69 266.2 204 57.4
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 2.2e-69 266.2 206 57.3
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 2.9e-69 265.8 204 58.8
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 4.9e-69 265.0 204 56.4
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 4.9e-69 265.0 204 56.9
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 4.9e-69 265.0 204 57.4
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 4.9e-69 265.0 205 57.1
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 6.4e-69 264.6 204 57.8
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 6.4e-69 264.6 205 58.0
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 1.4e-68 263.5 204 55.9
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 1.4e-68 263.5 205 56.1
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 2.4e-68 262.7 206 59.2
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 3.2e-68 262.3 205 59.0
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 4.1e-68 261.9 203 60.1
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 5.4e-68 261.5 207 55.1
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 7.1e-68 261.2 204 56.4
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 9.2e-68 260.8 204 55.9
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 9.2e-68 260.8 206 54.4
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 1.2e-67 260.4 205 58.0
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 1.2e-67 260.4 206 55.8
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.2e-67 260.4 205 57.1
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.6e-67 260.0 206 56.3
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 2.7e-67 259.2 204 55.9
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 2.7e-67 259.2 206 55.8
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 2.7e-67 259.2 204 56.9
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 3.5e-67 258.8 204 56.9
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 6.0e-67 258.1 204 55.4
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 7.8e-67 257.7 204 56.9
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 7.8e-67 257.7 204 56.9
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.0e-66 257.3 203 58.6
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 1.0e-66 257.3 204 54.4
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.3e-66 256.9 206 55.8
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 1.3e-66 256.9 204 55.9
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 1.3e-66 256.9 204 55.4
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 1.3e-66 256.9 204 55.4
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 1.3e-66 256.9 204 56.9
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 1.7e-66 256.5 204 54.9
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 1.7e-66 256.5 204 54.9
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 2.3e-66 256.1 204 55.4
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 6.6e-66 254.6 204 55.4
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 8.6e-66 254.2 204 56.9
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 8.6e-66 254.2 204 56.9
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 1.1e-65 253.8 204 56.9
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.9e-65 253.1 204 54.9
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.9e-65 253.1 204 55.9
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.5e-65 252.7 204 55.4
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 5.6e-65 251.5 204 55.9
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 5.6e-65 251.5 207 54.6
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 2.8e-64 249.2 204 54.4
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 1.4e-63 246.9 204 54.4
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.4e-63 246.9 204 54.9
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.8e-63 246.5 204 54.4
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 4.0e-63 245.4 200 57.0
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 5.2e-63 245.0 204 53.4
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 6.8e-63 244.6 204 54.9
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 1.2e-62 243.8 204 53.4
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 2.0e-62 243.0 204 55.4
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 5.8e-62 241.5 235 50.6
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 1.7e-61 240.0 204 55.9
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 5.4e-60 235.0 204 51.5
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 3.0e-58 229.2 185 55.7
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 5.6e-57 224.9 197 55.8
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 4.8e-56 221.9 196 54.1
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 8.1e-56 221.1 161 61.5
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 3.1e-55 219.2 166 61.4
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 5.3e-55 218.4 165 60.0
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 6.9e-55 218.0 208 50.5
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 2.6e-54 216.1 205 46.3
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 5.8e-54 214.9 195 50.8
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 9.3e-52 207.6 195 50.8
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 5.1e-50 201.8 184 50.0
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 8.1e-48 194.5 195 47.7
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 1.4e-47 193.7 207 44.9
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 5.3e-47 191.8 208 44.2
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 2.6e-46 189.5 195 48.2
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 5.8e-46 188.3 140 56.4
FAN02G1482 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.9e-44 183.3 207 43.0
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 2.7e-43 179.5 136 58.1
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 1.3e-42 177.2 137 56.2
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.8e-42 176.8 228 44.3
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 6.7e-42 174.9 122 63.1
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 9.0e-39 164.5 177 49.7
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 5.8e-38 161.8 127 57.5
CDE10G0487 Ceratophyllum demersum HOM05D004605 ORTHO05D005804 1.9e-36 156.8 111 64.0
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 7.9e-35 151.4 162 43.8
FAN05G1095 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.8e-32 142.9 202 38.1
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 6.9e-31 138.3 208 36.1
MCO08G262 Micromonas commoda HOM05D004605 ORTHO05D005804 2.0e-30 136.7 231 37.2
Aqoxy3G03713 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.0e-29 134.4 109 54.1
Mapoly0107s0018 Marchantia polymorpha HOM05D004605 ORTHO05D005804 2.4e-23 113.2 214 31.8
PSO591G0315 Papaver somniferum HOM05D004605 ORTHO05D005804 9.0e-23 111.3 66 66.7
HPP92_012204 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.0e-21 107.8 138 42.8
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 8.5e-21 104.8 208 33.7
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 5.5e-20 102.1 210 31.4
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 4.6e-19 99.0 200 30.5
Cfa022693 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.4e-18 97.4 217 28.1
Cc07_g04480 Coffea canephora HOM05D004605 ORTHO05D005804 1.1e-17 94.4 73 56.2
BolC3t14639H Brassica oleracea HOM05D004605 ORTHO05D005804 1.3e-16 90.9 55 61.8
Nn4g23522 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.8e-15 87.0 69 53.6
QL02p036101 Quercus lobata HOM05D004605 ORTHO05D005804 2.0e-14 83.6 110 39.1
QL10p049039 Quercus lobata HOM05D004605 ORTHO05D005804 2.0e-14 83.6 110 39.1
QL10p051328 Quercus lobata HOM05D004605 ORTHO05D005804 7.7e-14 81.6 110 38.2
Nn1g08577 Nelumbo nucifera HOM05D004605 ORTHO05D005804 3.9e-10 69.3 41 61.0
Cre10.g464500 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 6.7e-10 68.6 223 25.6
Nn1g08579 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.5e-09 67.4 124 36.3
HPP92_012246 Vanilla planifolia HOM05D004605 ORTHO05D005804 9.7e-09 64.7 108 37.0
Nn1g08580 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.7e-08 63.9 40 55.0
arahy.Tifrunner.gnm1.ann1.2EY802 Arachis hypogaea HOM05D004605 ORTHO05D005804 4.1e-07 59.3 46 50.0
MCO01G611 Micromonas commoda HOM05D053327 ORTHO05D048986 4.1e-07 59.3 135 31.1
PRCOL_00005781 Prasinoderma coloniale HOM05D053327 ORTHO05D048986 2.0e-06 57.0 129 33.3


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