Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.0e-72 275.0 133 100.0
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 9.7e-47 190.3 132 68.2
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.3e-46 189.9 127 68.5
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 2.8e-46 188.7 125 70.4
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.8e-46 188.7 127 67.7
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 3.7e-46 188.3 127 67.7
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 3.7e-46 188.3 127 70.9
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 4.8e-46 188.0 124 68.5
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 8.2e-46 187.2 127 66.9
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.1e-45 186.8 130 67.7
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.4e-45 186.4 124 71.0
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 1.4e-45 186.4 122 70.5
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 1.8e-45 186.0 126 67.5
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.8e-45 186.0 122 71.3
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 1.8e-45 186.0 127 70.1
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.4e-45 185.7 121 70.2
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 2.4e-45 185.7 125 68.8
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 3.1e-45 185.3 121 71.1
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 3.1e-45 185.3 128 68.0
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 3.1e-45 185.3 123 68.3
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 3.1e-45 185.3 120 70.8
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 4.1e-45 184.9 121 69.4
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 4.1e-45 184.9 125 68.8
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 4.1e-45 184.9 125 69.6
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 4.1e-45 184.9 122 69.7
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 5.3e-45 184.5 128 68.0
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 7.0e-45 184.1 125 66.4
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 9.1e-45 183.7 120 69.2
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 9.1e-45 183.7 120 69.2
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 9.1e-45 183.7 120 70.8
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 9.1e-45 183.7 136 64.7
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.2e-44 183.3 127 67.7
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 1.2e-44 183.3 120 71.7
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.5e-44 183.0 120 70.8
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 1.5e-44 183.0 127 66.9
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.0e-44 182.6 126 67.5
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.0e-44 182.6 123 69.1
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 2.0e-44 182.6 127 66.9
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 2.0e-44 182.6 121 66.9
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 2.6e-44 182.2 120 70.0
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 2.6e-44 182.2 120 69.2
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 2.6e-44 182.2 121 68.6
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 2.6e-44 182.2 120 70.0
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 2.6e-44 182.2 133 66.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.5e-44 181.8 124 68.5
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 3.5e-44 181.8 121 68.6
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 4.5e-44 181.4 120 70.0
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 4.5e-44 181.4 135 65.2
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 5.9e-44 181.0 130 64.6
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 5.9e-44 181.0 125 68.0
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 5.9e-44 181.0 123 67.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 7.7e-44 180.6 129 65.1
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 7.7e-44 180.6 121 67.8
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.0e-43 180.3 123 65.9
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.0e-43 180.3 130 66.2
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.3e-43 179.9 127 66.9
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.3e-43 179.9 129 65.9
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.7e-43 179.5 128 65.6
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.7e-43 179.5 125 67.2
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.7e-43 179.5 121 66.9
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.2e-43 179.1 120 65.8
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 2.2e-43 179.1 127 64.6
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 2.2e-43 179.1 120 66.7
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 2.2e-43 179.1 120 69.2
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 2.9e-43 178.7 126 66.7
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 3.8e-43 178.3 121 68.6
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 3.8e-43 178.3 134 64.2
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 5.0e-43 177.9 123 65.9
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 5.0e-43 177.9 121 65.3
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 5.0e-43 177.9 120 67.5
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 5.0e-43 177.9 120 68.3
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 6.5e-43 177.6 121 64.5
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 6.5e-43 177.6 121 66.9
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 8.5e-43 177.2 119 65.5
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 1.4e-42 176.4 121 64.5
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.4e-42 176.4 121 64.5
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 1.4e-42 176.4 122 67.2
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.4e-42 176.4 126 65.1
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 1.4e-42 176.4 120 68.3
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.9e-42 176.0 121 64.5
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.5e-42 175.6 121 64.5
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 2.5e-42 175.6 119 65.5
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.5e-42 175.6 117 68.4
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 2.5e-42 175.6 132 64.4
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.2e-42 175.3 120 66.7
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 5.5e-42 174.5 121 63.6
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 5.5e-42 174.5 121 63.6
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 5.5e-42 174.5 134 62.7
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 9.4e-42 173.7 120 67.5
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 1.2e-41 173.3 121 63.6
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.6e-41 172.9 121 67.8
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.6e-41 172.9 120 67.5
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.7e-41 172.2 131 62.6
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 6.1e-41 171.0 121 66.1
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 6.1e-41 171.0 128 62.5
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.4e-40 169.9 121 66.1
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 5.2e-40 167.9 131 62.6
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 7.4e-39 164.1 110 67.3
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 4.8e-38 161.4 124 62.1
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.8e-37 159.5 124 61.3
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 3.1e-37 158.7 123 61.8
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 6.5e-35 151.0 130 52.3
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 8.5e-35 150.6 150 52.0
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.2e-33 146.7 99 65.7
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 3.0e-32 142.1 130 53.8
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 5.7e-31 137.9 140 51.4
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 4.1e-29 131.7 149 48.3
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 5.9e-20 101.3 123 46.3
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 6.6e-19 97.8 73 54.8
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 8.6e-19 97.4 115 44.3
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.1e-18 97.1 73 54.8
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 3.6e-17 92.0 69 68.1
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 3.0e-16 89.0 59 59.3
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 4.0e-16 88.6 60 56.7
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.3e-11 72.8 71 43.7
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.3e-06 57.0 37 62.2


User provided reference genes

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