Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0146 Selaginella moellendorffii HOM05D004435 ORTHO05D005103 1.7e-265 918.7 445 100.0
ATR0605G027 Amborella trichopoda HOM05D004435 ORTHO05D005103 6.6e-156 554.7 459 56.9
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 3.7e-151 538.9 471 56.1
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 6.3e-151 538.1 463 54.4
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 9.2e-150 534.3 460 53.0
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 3.5e-149 532.3 467 53.7
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 5.9e-149 531.6 463 54.6
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 1.7e-148 530.0 447 54.6
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 2.3e-148 529.6 450 56.0
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 2.9e-148 529.3 460 53.3
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 3.9e-148 528.9 458 53.5
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.9e-147 526.6 461 52.9
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 2.5e-147 526.2 466 53.2
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 3.3e-147 525.8 462 53.9
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 5.6e-147 525.0 450 55.8
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 7.3e-147 524.6 451 56.1
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 1.2e-146 523.9 459 54.7
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 1.2e-146 523.9 456 54.6
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 2.8e-146 522.7 451 55.9
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 3.6e-146 522.3 466 53.0
MBI06_g46370_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 3.6e-146 522.3 462 53.5
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 4.7e-146 521.9 468 53.4
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 4.7e-146 521.9 451 55.7
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 8.0e-146 521.2 451 55.4
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 2.3e-145 519.6 452 53.1
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 2.3e-145 519.6 461 54.0
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 3.1e-145 519.2 466 52.6
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 4.0e-145 518.8 459 53.8
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 5.2e-145 518.5 463 52.5
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 8.9e-145 517.7 462 52.6
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 1.2e-144 517.3 449 53.7
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 1.5e-144 516.9 466 50.6
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.8e-144 515.0 466 52.8
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 7.5e-144 514.6 452 53.1
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 7.5e-144 514.6 466 52.8
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 7.5e-144 514.6 462 53.0
Nitab4.5_0007244g0020 Nicotiana tabacum HOM05D004435 ORTHO05D005103 9.8e-144 514.2 475 54.3
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 9.8e-144 514.2 445 53.3
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.7e-143 513.5 466 52.6
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.7e-143 513.5 466 52.6
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 2.2e-143 513.1 455 51.6
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 2.9e-143 512.7 456 54.4
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 4.9e-143 511.9 450 53.3
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 4.9e-143 511.9 449 52.1
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 4.9e-143 511.9 460 51.7
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 6.4e-143 511.5 458 53.5
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 1.1e-142 510.8 460 51.3
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 1.1e-142 510.8 458 52.0
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 1.1e-142 510.8 455 54.3
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 1.4e-142 510.4 445 53.0
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 1.4e-142 510.4 460 51.3
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 1.9e-142 510.0 441 53.5
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 2.4e-142 509.6 456 53.9
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 2.4e-142 509.6 445 53.3
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 3.2e-142 509.2 452 52.7
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 3.2e-142 509.2 456 53.9
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 3.2e-142 509.2 458 51.7
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 4.1e-142 508.8 465 50.8
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 5.4e-142 508.4 456 54.4
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 5.4e-142 508.4 457 52.1
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 7.0e-142 508.1 456 51.5
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 7.0e-142 508.1 475 51.6
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 9.2e-142 507.7 441 53.3
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 1.6e-141 506.9 454 53.3
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 2.0e-141 506.5 459 54.7
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 6.0e-141 505.0 457 51.2
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 1.3e-140 503.8 458 52.8
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 1.3e-140 503.8 458 52.8
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 1.7e-140 503.4 447 53.2
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 3.0e-140 502.7 462 51.9
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 5.0e-140 501.9 461 53.4
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 5.0e-140 501.9 457 51.0
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 7.3e-139 498.0 458 50.9
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 1.2e-138 497.3 466 50.4
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 2.1e-138 496.5 462 51.3
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 2.1e-138 496.5 462 52.4
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 3.6e-138 495.7 458 50.9
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 6.2e-138 495.0 457 50.8
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 1.1e-137 494.2 457 51.6
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 1.1e-137 494.2 458 50.0
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 2.3e-137 493.0 442 52.0
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 4.0e-137 492.3 458 51.1
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 5.2e-137 491.9 485 48.7
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 4.4e-136 488.8 458 51.1
Os01g0551900 Oryza sativa ssp. japonica HOM05D004435 ORTHO05D005103 4.4e-136 488.8 461 49.9
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 9.8e-136 487.6 460 51.1
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 5.1e-132 475.3 442 49.8
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 1.5e-131 473.8 445 50.8
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.8e-129 466.8 459 48.8
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 3.1e-129 466.1 422 51.4
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 5.2e-129 465.3 457 49.7
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 6.8e-129 464.9 461 49.0
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 1.5e-128 463.8 457 50.1
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 2.7e-125 453.0 449 48.3
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 4.0e-121 439.1 452 50.9
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 1.2e-112 411.0 453 46.8
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 2.1e-109 400.2 490 44.7
Hma1.2p1_0101F.1_g049290 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 5.6e-107 392.1 330 56.7
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 1.6e-93 347.4 351 46.4
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 1.1e-62 245.0 281 44.1
Cpa.g.sc96.43 Carica papaya HOM05D004435 ORTHO05D005103 8.2e-58 228.8 225 48.4
SEGI_18144 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 4.8e-50 203.0 164 59.8
FAN01G0536 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.1e-49 200.3 198 50.0
Actinidia20096 Actinidia chinensis HOM05D004435 ORTHO05D005103 2.0e-48 197.6 264 42.8
PGSC0003DMG400000235 Solanum tuberosum HOM05D004435 ORTHO05D005103 1.0e-44 185.3 174 50.0
SEGI_02021 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 1.2e-43 181.8 138 63.8
Atru.chr5.691 Acer truncatum HOM05D004435 ORTHO05D005103 6.3e-42 176.0 120 65.8
Cpa.g.sc96.46 Carica papaya HOM05D004435 ORTHO05D005103 6.8e-36 156.0 145 50.3
Actinidia20091 Actinidia chinensis HOM05D004435 ORTHO05D005103 9.5e-30 135.6 396 27.8
Ca_26677_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 8.3e-26 122.5 74 75.7
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 3.2e-25 120.6 193 37.8
HanXRQChr10g0310771 Helianthus annuus HOM05D004435 ORTHO05D005103 2.5e-22 110.9 108 48.1
MCO11G580 Micromonas commoda HOM05D004435 ORTHO05D005103 6.8e-20 102.8 408 24.8
Cre04.g223000 Chlamydomonas reinhardtii HOM05D004435 ORTHO05D005103 1.5e-19 101.7 413 24.2
Atru.chr5.692 Acer truncatum HOM05D004435 ORTHO05D005103 9.8e-19 99.0 103 49.5
HanXRQChr03g0082981 Helianthus annuus HOM05D004435 ORTHO05D005103 5.6e-14 83.2 109 41.3


User provided reference genes

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