Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0084 Selaginella moellendorffii HOM05D004761 ORTHO05D005813 7.7e-141 503.8 259 100.0
SEGI_01542 Sequoiadendron giganteum HOM05D004761 ORTHO05D005813 9.9e-72 274.2 200 71.5
Lalb_Chr21g0308901 Lupinus albus HOM05D004761 ORTHO05D005813 3.8e-71 272.3 216 68.5
Eucgr.G02317 Eucalyptus grandis HOM05D004761 ORTHO05D005813 8.4e-71 271.2 216 68.1
TWI31G0637 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 4.2e-70 268.9 240 62.1
Gohir.D02G170400 Gossypium hirsutum HOM05D004761 ORTHO05D005813 5.5e-70 268.5 223 65.5
Gorai.005G191400 Gossypium raimondii HOM05D004761 ORTHO05D005813 5.5e-70 268.5 223 65.5
Lalb_Chr02g0145941 Lupinus albus HOM05D004761 ORTHO05D005813 9.3e-70 267.7 196 71.9
CiPaw.16G065200 Carya illinoinensis HOM05D004761 ORTHO05D005813 1.6e-69 266.9 214 68.2
FAN07G1541 Fragaria x ananassa HOM05D004761 ORTHO05D005813 1.6e-69 266.9 223 65.9
Gohir.A03G147200 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.6e-69 266.9 223 65.0
Cfa018591 Carpinus fangiana HOM05D004761 ORTHO05D005813 2.1e-69 266.5 216 67.1
SGA_v2.0_scaffold170G38770 Striga asiatica HOM05D004761 ORTHO05D005813 2.1e-69 266.5 188 74.5
TWI79G0635 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 2.7e-69 266.2 227 65.6
FvH4_4g27310 Fragaria vesca HOM05D004761 ORTHO05D005813 3.5e-69 265.8 222 65.8
FAN12G1206 Fragaria x ananassa HOM05D004761 ORTHO05D005813 3.5e-69 265.8 222 65.8
FAN12G1874 Fragaria x ananassa HOM05D004761 ORTHO05D005813 3.5e-69 265.8 222 65.8
MD16G1042300 Malus domestica HOM05D004761 ORTHO05D005813 3.5e-69 265.8 219 66.7
MD13G1041400 Malus domestica HOM05D004761 ORTHO05D005813 4.6e-69 265.4 219 66.7
Sed0020611 Sechium edule HOM05D004761 ORTHO05D005813 7.9e-69 264.6 193 72.0
FAN22G1660 Fragaria x ananassa HOM05D004761 ORTHO05D005813 1.3e-68 263.8 226 65.5
Oeu003182.1 Olea europaea HOM05D004761 ORTHO05D005813 1.3e-68 263.8 193 71.5
arahy.Tifrunner.gnm1.ann1.8WFG9Z Arachis hypogaea HOM05D004761 ORTHO05D005813 2.3e-68 263.1 188 73.9
arahy.Tifrunner.gnm1.ann1.QJ0JEK Arachis hypogaea HOM05D004761 ORTHO05D005813 2.3e-68 263.1 188 73.9
Prupe.1G311800 Prunus persica HOM05D004761 ORTHO05D005813 2.3e-68 263.1 229 62.9
Lsat_1_v5_gn_3_59080 Lactuca sativa HOM05D004761 ORTHO05D005813 3.9e-68 262.3 243 61.3
arahy.Tifrunner.gnm1.ann1.BGN30W Arachis hypogaea HOM05D004761 ORTHO05D005813 5.1e-68 261.9 188 73.4
Ciclev10016274m.g Citrus clementina HOM05D004761 ORTHO05D005813 6.7e-68 261.5 193 71.5
Glyma.20G116100 Glycine max HOM05D004761 ORTHO05D005813 6.7e-68 261.5 202 68.3
Migut.E00345 Erythranthe guttata HOM05D004761 ORTHO05D005813 8.7e-68 261.2 226 63.3
Gohir.D11G344800 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.1e-67 260.8 239 60.7
Manes.14G102900 Manihot esculenta HOM05D004761 ORTHO05D005813 1.1e-67 260.8 203 70.4
Nitab4.5_0000791g0110 Nicotiana tabacum HOM05D004761 ORTHO05D005813 1.5e-67 260.4 194 70.1
CSS0041255 Camellia sinensis var. sinensis HOM05D004761 ORTHO05D005813 1.9e-67 260.0 209 67.0
Cc11_g10100 Coffea canephora HOM05D004761 ORTHO05D005813 1.9e-67 260.0 233 61.8
Gorai.007G375200 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.9e-67 260.0 239 60.7
PSO675G3483 Papaver somniferum HOM05D004761 ORTHO05D005813 1.9e-67 260.0 223 63.7
Potri.008G121100 Populus trichocarpa HOM05D004761 ORTHO05D005813 1.9e-67 260.0 210 67.6
EL10Ac6g14394 Beta vulgaris HOM05D004761 ORTHO05D005813 3.3e-67 259.2 195 69.2
Duzib248G0790 Durio zibethinus HOM05D004761 ORTHO05D005813 3.3e-67 259.2 217 66.4
Nitab4.5_0003373g0010 Nicotiana tabacum HOM05D004761 ORTHO05D005813 3.3e-67 259.2 194 69.6
PSO717G0038 Papaver somniferum HOM05D004761 ORTHO05D005813 3.3e-67 259.2 223 63.2
VMungo0720G0616 Vigna mungo HOM05D004761 ORTHO05D005813 3.3e-67 259.2 202 67.8
Lj5g0002032 Lotus japonicus HOM05D004761 ORTHO05D005813 5.6e-67 258.5 206 68.0
Sopen05g005170 Solanum pennellii HOM05D004761 ORTHO05D005813 5.6e-67 258.5 188 71.8
DCAR_023656 Daucus carota HOM05D004761 ORTHO05D005813 7.4e-67 258.1 188 71.8
HanXRQChr15g0476311 Helianthus annuus HOM05D004761 ORTHO05D005813 7.4e-67 258.1 211 66.8
MSTRG.843 Avicennia marina HOM05D004761 ORTHO05D005813 9.6e-67 257.7 188 71.8
Psat6g225000 Pisum sativum HOM05D004761 ORTHO05D005813 9.6e-67 257.7 189 72.5
RcHm_v2.0_Chr4g0435111 Rosa chinensis HOM05D004761 ORTHO05D005813 9.6e-67 257.7 188 72.9
Sabra08G0091800 Salix brachista HOM05D004761 ORTHO05D005813 9.6e-67 257.7 192 71.9
Cpa.g.sc1.34 Carica papaya HOM05D004761 ORTHO05D005813 1.3e-66 257.3 209 67.0
Lj3C1014G6 Lonicera japonica HOM05D004761 ORTHO05D005813 1.3e-66 257.3 188 71.3
PGSC0003DMG400014544 Solanum tuberosum HOM05D004761 ORTHO05D005813 1.3e-66 257.3 188 71.3
AUR62002860 Chenopodium quinoa HOM05D004761 ORTHO05D005813 1.6e-66 256.9 195 69.2
ClCG05G022660 Citrullus lanatus HOM05D004761 ORTHO05D005813 1.6e-66 256.9 186 73.1
Sc11g0003470 Simmondsia chinensis HOM05D004761 ORTHO05D005813 1.6e-66 256.9 194 68.6
ATR0171G026 Amborella trichopoda HOM05D004761 ORTHO05D005813 2.1e-66 256.5 200 67.5
CAN.G610.79 Capsicum annuum HOM05D004761 ORTHO05D005813 2.1e-66 256.5 188 71.8
CDE05G1514 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 2.1e-66 256.5 195 68.2
ECA246G4195 Erigeron canadensis HOM05D004761 ORTHO05D005813 2.1e-66 256.5 202 67.8
Peaxi162Scf00382g00825 Petunia axillaris HOM05D004761 ORTHO05D005813 2.1e-66 256.5 193 69.9
Ah.02g127920 Amaranthus hybridus HOM05D004761 ORTHO05D005813 2.8e-66 256.1 195 68.7
CANSAT01G0623 Cannabis sativa HOM05D004761 ORTHO05D005813 2.8e-66 256.1 188 71.3
AUR62035212 Chenopodium quinoa HOM05D004761 ORTHO05D005813 2.8e-66 256.1 195 68.7
Rhsim09G0107700 Rhododendron simsii HOM05D004761 ORTHO05D005813 2.8e-66 256.1 204 66.7
CsaV3_5G034380 Cucumis sativus L. HOM05D004761 ORTHO05D005813 3.7e-66 255.8 191 71.2
Medtr1g110750 Medicago truncatula HOM05D004761 ORTHO05D005813 4.8e-66 255.4 219 62.6
TAR629G2706 Trochodendron aralioides HOM05D004761 ORTHO05D005813 6.2e-66 255.0 188 71.8
Hma1.2p1_0061F.1_g033840 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 8.2e-66 254.6 188 71.8
GSVIVG01011891001 Vitis vinifera HOM05D004761 ORTHO05D005813 1.1e-65 254.2 211 66.4
vmacro10560 Vaccinium macrocarpon HOM05D004761 ORTHO05D005813 1.8e-65 253.4 197 68.5
Aqoxy3G00293 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 2.4e-65 253.1 187 72.2
BcaB07g30626 Brassica carinata HOM05D004761 ORTHO05D005813 2.4e-65 253.1 195 68.7
Thhalv10004759m.g Eutrema salsugineum HOM05D004761 ORTHO05D005813 2.4e-65 253.1 218 64.2
PGR119G1215 Punica granatum HOM05D004761 ORTHO05D005813 3.1e-65 252.7 235 60.0
THA.LOC104825698 Tarenaya hassleriana HOM05D004761 ORTHO05D005813 6.9e-65 251.5 200 67.5
BolC7t44030H Brassica oleracea HOM05D004761 ORTHO05D005813 9.0e-65 251.1 213 64.3
Phvul.007G027600 Phaseolus vulgaris HOM05D004761 ORTHO05D005813 9.0e-65 251.1 218 63.8
Aa31LG2G6400 Aethionema arabicum HOM05D004761 ORTHO05D005813 1.2e-64 250.8 188 70.7
Carub.0005s0378 Capsella rubella HOM05D004761 ORTHO05D005813 2.0e-64 250.0 256 56.6
Sp2g15160 Schrenkiella parvula HOM05D004761 ORTHO05D005813 2.0e-64 250.0 196 67.3
BcaC04g21408 Brassica carinata HOM05D004761 ORTHO05D005813 2.6e-64 249.6 189 70.9
C09p32130 Brassica napus HOM05D004761 ORTHO05D005813 2.6e-64 249.6 189 70.9
BolC9t56063H Brassica oleracea HOM05D004761 ORTHO05D005813 2.6e-64 249.6 189 70.9
BcaC06g31103 Brassica carinata HOM05D004761 ORTHO05D005813 3.4e-64 249.2 214 64.0
A06p42360 Brassica napus HOM05D004761 ORTHO05D005813 3.4e-64 249.2 189 69.8
BraA06t27151Z Brassica rapa HOM05D004761 ORTHO05D005813 3.4e-64 249.2 189 69.8
C07p34980 Brassica napus HOM05D004761 ORTHO05D005813 4.5e-64 248.8 213 63.8
A09p25090 Brassica napus HOM05D004761 ORTHO05D005813 5.8e-64 248.4 189 70.4
BraA09t38096Z Brassica rapa HOM05D004761 ORTHO05D005813 5.8e-64 248.4 189 70.4
Dinv21082 Davidia involucrata HOM05D004761 ORTHO05D005813 7.6e-64 248.1 195 68.2
AT3G25920 Arabidopsis thaliana HOM05D004761 ORTHO05D005813 1.0e-63 247.7 247 57.1
Pp3c20_9200 Physcomitrium patens HOM05D004761 ORTHO05D005813 1.0e-63 247.7 251 56.6
arahy.Tifrunner.gnm1.ann1.B0KB7I Arachis hypogaea HOM05D004761 ORTHO05D005813 1.3e-63 247.3 214 65.0
Mapoly0065s0007 Marchantia polymorpha HOM05D004761 ORTHO05D005813 1.3e-63 247.3 191 69.1
Pp3c24_11450 Physcomitrium patens HOM05D004761 ORTHO05D005813 2.9e-63 246.1 188 68.1
AL5G14580 Arabidopsis lyrata HOM05D004761 ORTHO05D005813 4.9e-63 245.4 245 55.9
Hund25060 Selenicereus undatus HOM05D004761 ORTHO05D005813 6.5e-63 245.0 198 66.2
AagrBONN_evm.TU.Sc2ySwM_228.2844 Anthoceros agrestis HOM05D004761 ORTHO05D005813 1.4e-62 243.8 190 68.4
CDE05G0568 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 1.4e-62 243.8 246 56.5
Pp3c23_7670 Physcomitrium patens HOM05D004761 ORTHO05D005813 1.4e-62 243.8 251 55.0
BcaC06g33937 Brassica carinata HOM05D004761 ORTHO05D005813 4.2e-62 242.3 213 62.4
CARHR146910 Cardamine hirsuta HOM05D004761 ORTHO05D005813 7.1e-62 241.5 202 64.4
Os03g0219900 Oryza sativa ssp. japonica HOM05D004761 ORTHO05D005813 1.2e-61 240.7 207 63.8
Pp3c8_18220 Physcomitrium patens HOM05D004761 ORTHO05D005813 1.2e-61 240.7 243 56.4
Zm00001eb008910 Zea mays HOM05D004761 ORTHO05D005813 1.2e-61 240.7 227 59.5
Thecc.02G229900 Theobroma cacao HOM05D004761 ORTHO05D005813 3.0e-60 236.1 188 66.5
Ah.03g137610 Amaranthus hybridus HOM05D004761 ORTHO05D005813 2.2e-58 229.9 173 69.9
MELO3C012254.2 Cucumis melo HOM05D004761 ORTHO05D005813 1.8e-57 226.9 251 54.2
Actinidia16656 Actinidia chinensis HOM05D004761 ORTHO05D005813 7.7e-56 221.5 208 60.1
Potri.010G124301 Populus trichocarpa HOM05D004761 ORTHO05D005813 1.0e-55 221.1 217 59.4
QL01p042268 Quercus lobata HOM05D004761 ORTHO05D005813 3.2e-54 216.1 283 49.5
Haze_17489 Corylus avellana HOM05D004761 ORTHO05D005813 7.2e-54 214.9 339 43.1
Ca_11170_v3 Cicer arietinum L. HOM05D004761 ORTHO05D005813 3.9e-52 209.1 159 68.6
CBR_g6324 Chara braunii HOM05D004761 ORTHO05D005813 1.5e-51 207.2 215 54.4
MBI19_g21031_MAGBIO Magnolia biondii HOM05D004761 ORTHO05D005813 4.3e-51 205.7 195 59.0
Solyc05g009370.4 Solanum lycopersicum HOM05D004761 ORTHO05D005813 2.2e-50 203.4 153 69.9
HPP92_009433 Vanilla planifolia HOM05D004761 ORTHO05D005813 1.0e-47 194.5 168 63.1
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 4.7e-45 185.7 193 57.0
Cre14.g612450 Chlamydomonas reinhardtii HOM05D004761 ORTHO05D005813 7.9e-45 184.9 193 53.4
PRCOL_00000889 Prasinoderma coloniale HOM05D004761 ORTHO05D005813 3.1e-41 172.9 193 50.8
TPR.G862 Trifolium pratense HOM05D004761 ORTHO05D005813 1.9e-38 163.7 108 75.9
HPP92_009407 Vanilla planifolia HOM05D004761 ORTHO05D005813 8.0e-37 158.3 140 60.0
unitig_22.g5574 Utricularia gibba HOM05D004761 ORTHO05D005813 4.4e-35 152.5 204 48.5
Gohir.A11G325900 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.8e-33 147.1 127 63.0
COL.COLO4_29943 Corchorus olitorius HOM05D004761 ORTHO05D005813 9.1e-33 144.8 117 65.8
arahy.Tifrunner.gnm1.ann1.V6GCEW Arachis hypogaea HOM05D004761 ORTHO05D005813 1.2e-32 144.4 117 66.7
MCO09G351 Micromonas commoda HOM05D004761 ORTHO05D005813 5.0e-31 139.0 145 53.1
HanXRQChr17g0552301 Helianthus annuus HOM05D004761 ORTHO05D005813 1.3e-26 124.4 72 84.7
Gohir.D02G170233 Gossypium hirsutum HOM05D004761 ORTHO05D005813 8.3e-26 121.7 119 56.3
unitig_24.g30582 Utricularia gibba HOM05D004761 ORTHO05D005813 8.3e-26 121.7 70 84.3
Nn4g24161 Nelumbo nucifera HOM05D004761 ORTHO05D005813 1.8e-25 120.6 73 82.2
COL.COLO4_29942 Corchorus olitorius HOM05D004761 ORTHO05D005813 8.5e-23 111.7 61 88.5
Atru.chr11.97 Acer truncatum HOM05D004761 ORTHO05D005813 1.9e-22 110.5 208 38.5
Hma1.2p1_0798F.1_g219870 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 1.5e-19 100.9 70 74.3
Actinidia14894 Actinidia chinensis HOM05D004761 ORTHO05D005813 3.4e-19 99.8 122 46.7
Nn3g17852 Nelumbo nucifera HOM05D004761 ORTHO05D005813 4.8e-18 95.9 66 72.7
Sabra10G0094300 Salix brachista HOM05D004761 ORTHO05D005813 8.3e-18 95.1 152 44.1
Gorai.005G190700 Gossypium raimondii HOM05D004761 ORTHO05D005813 9.1e-17 91.7 123 47.2
TAR371G1076 Trochodendron aralioides HOM05D004761 ORTHO05D005813 2.0e-16 90.5 88 52.3
Gohir.D02G170133 Gossypium hirsutum HOM05D004761 ORTHO05D005813 2.7e-16 90.1 123 46.3
Sc11g0004060 Simmondsia chinensis HOM05D004761 ORTHO05D005813 2.5e-14 83.6 66 62.1
Aqoxy5G02814 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 1.0e-12 78.2 44 86.4
Oeu056572.1 Olea europaea HOM05D004761 ORTHO05D005813 4.0e-12 76.3 58 65.5
Hma1.2p1_0061F.1_g033850 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 2.6e-11 73.6 65 61.5
Haze_26805 Corylus avellana HOM05D005288 ORTHO05D006574 3.4e-11 73.2 166 37.3
Nn4g23851 Nelumbo nucifera HOM05D004761 ORTHO05D005813 1.3e-10 71.2 63 61.9
Pp3c25_6490 Physcomitrium patens HOM05D005288 ORTHO05D006574 2.2e-10 70.5 173 35.3
DCAR_026734 Daucus carota HOM05D004761 ORTHO05D005813 7.0e-09 65.5 69 55.1
Os08g0310100 Oryza sativa ssp. japonica HOM05D005288 ORTHO05D006574 5.9e-08 62.4 192 32.8
Zm00001eb129960 Zea mays HOM05D005288 ORTHO05D006574 7.8e-08 62.0 167 34.1
Oeu056574.1 Olea europaea HOM05D004761 ORTHO05D037944 1.0e-07 61.6 47 70.2
Atru.chr2.2517 Acer truncatum HOM05D004761 ORTHO05D005813 2.3e-07 60.5 36 77.8
MSTRG.23423 Avicennia marina HOM05D005288 ORTHO05D006574 2.3e-07 60.5 155 34.8
AagrBONN_evm.TU.Sc2ySwM_344.1252 Anthoceros agrestis HOM05D005288 ORTHO05D000776 5.0e-07 59.3 170 33.5
SGA_v2.0_scaffold146G36155 Striga asiatica HOM05D005288 ORTHO05D006574 5.0e-07 59.3 155 34.8
ATR0681G389 Amborella trichopoda HOM05D005288 ORTHO05D006574 6.6e-07 58.9 154 35.1
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 6.6e-07 58.9 211 31.8
AUR62037110 Chenopodium quinoa HOM05D005288 ORTHO05D006574 6.6e-07 58.9 187 32.1
Sc22g0002320 Simmondsia chinensis HOM05D005288 ORTHO05D006574 6.6e-07 58.9 189 31.7
MSTRG.2688 Avicennia marina HOM05D005288 ORTHO05D006574 8.6e-07 58.5 154 33.8
Hund15173 Selenicereus undatus HOM05D005288 ORTHO05D006574 1.1e-06 58.2 191 32.5
EL10As1g23109 Beta vulgaris HOM05D005288 ORTHO05D006574 2.5e-06 57.0 190 31.6
PSO238G0014 Papaver somniferum HOM05D005288 ORTHO05D006574 2.5e-06 57.0 155 34.2
Ah.12g062320 Amaranthus hybridus HOM05D005288 ORTHO05D006574 3.3e-06 56.6 189 31.7
Migut.H01124 Erythranthe guttata HOM05D005288 ORTHO05D006574 3.3e-06 56.6 155 34.2
Nitab4.5_0002064g0080 Nicotiana tabacum HOM05D005288 ORTHO05D006574 3.3e-06 56.6 191 31.9
PSO210G3075 Papaver somniferum HOM05D005288 ORTHO05D006574 3.3e-06 56.6 192 30.7
GSVIVG01016205001 Vitis vinifera HOM05D005288 ORTHO05D006574 3.3e-06 56.6 155 34.8
Solyc02g081310.3 Solanum lycopersicum HOM05D005288 ORTHO05D006574 4.3e-06 56.2 154 33.8
AUR62042368 Chenopodium quinoa HOM05D005288 ORTHO05D006574 5.6e-06 55.8 189 31.2
PRCOL_00002014 Prasinoderma coloniale HOM05D005288 ORTHO05D006574 5.6e-06 55.8 157 30.6
unitig_27.g25064 Utricularia gibba HOM05D005288 ORTHO05D006574 5.6e-06 55.8 155 32.9
Ca_06746_v3 Cicer arietinum L. HOM05D005288 ORTHO05D006574 7.3e-06 55.5 144 33.3
SGA_v2.0_scaffold76G25165 Striga asiatica HOM05D005288 ORTHO05D006574 9.5e-06 55.1 61 52.5


User provided reference genes

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