Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 6.6e-196 687.2 345 100.0
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 1.2e-27 128.3 245 31.4
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 1.2e-24 118.2 249 30.1
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 2.1e-24 117.5 246 29.7
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.7e-24 117.1 245 29.4
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 4.6e-24 116.3 245 29.0
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 7.9e-24 115.5 247 28.7
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.0e-23 115.2 249 29.3
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.0e-23 115.2 309 28.2
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.3e-23 114.8 246 28.9
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 1.8e-23 114.4 249 28.9
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 2.3e-23 114.0 248 29.8
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 2.3e-23 114.0 252 28.2
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 3.0e-23 113.6 246 30.1
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 3.0e-23 113.6 250 29.6
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 3.0e-23 113.6 245 27.8
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 3.9e-23 113.2 248 30.6
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 5.1e-23 112.8 251 30.7
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.7e-23 112.1 248 28.2
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 1.1e-22 111.7 246 29.7
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.1e-22 111.7 255 28.2
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.1e-22 111.7 248 29.4
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.1e-22 111.7 248 30.2
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.5e-22 111.3 248 28.6
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 1.5e-22 111.3 256 27.3
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.9e-22 110.9 249 26.5
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.5e-22 110.5 250 28.4
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 2.5e-22 110.5 251 27.5
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.5e-22 110.5 249 29.3
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.5e-22 110.5 247 27.9
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 4.3e-22 109.8 246 28.0
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 7.4e-22 109.0 254 26.8
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 7.4e-22 109.0 246 27.6
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 9.6e-22 108.6 245 27.8
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 1.3e-21 108.2 248 28.2
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 1.3e-21 108.2 246 27.6
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 1.6e-21 107.8 246 29.3
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 2.1e-21 107.5 248 29.0
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 2.1e-21 107.5 251 26.7
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 2.8e-21 107.1 249 27.7
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 3.7e-21 106.7 247 28.3
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 6.2e-21 105.9 254 27.2
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 6.2e-21 105.9 246 26.8
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 8.2e-21 105.5 254 26.8
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 8.2e-21 105.5 256 28.1
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 8.2e-21 105.5 260 26.9
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 8.2e-21 105.5 252 25.4
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.1e-20 105.1 254 27.2
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.4e-20 104.8 254 27.2
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 1.8e-20 104.4 176 30.7
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 1.8e-20 104.4 250 27.6
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 1.8e-20 104.4 258 27.5
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 2.4e-20 104.0 246 26.8
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.4e-20 104.0 257 26.1
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 2.4e-20 104.0 295 28.8
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 2.4e-20 104.0 249 27.7
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 3.1e-20 103.6 252 28.2
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 3.1e-20 103.6 267 25.5
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 3.1e-20 103.6 267 25.8
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 3.1e-20 103.6 267 25.8
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 3.1e-20 103.6 255 29.0
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 4.0e-20 103.2 246 28.9
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 4.0e-20 103.2 254 26.0
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.0e-20 103.2 257 28.8
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 5.3e-20 102.8 246 27.6
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 6.9e-20 102.4 249 25.7
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 6.9e-20 102.4 246 26.4
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 6.9e-20 102.4 247 27.5
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 9.0e-20 102.1 267 25.8
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 9.0e-20 102.1 248 28.2
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.2e-19 101.7 254 26.0
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 1.2e-19 101.7 246 26.4
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.2e-19 101.7 251 26.7
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.2e-19 101.7 252 27.0
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.2e-19 101.7 247 27.1
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 1.2e-19 101.7 255 26.7
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.5e-19 101.3 254 26.0
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 2.0e-19 100.9 246 26.4
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 2.0e-19 100.9 254 28.0
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 2.6e-19 100.5 269 25.3
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 2.6e-19 100.5 250 26.0
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 2.6e-19 100.5 262 27.1
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 2.6e-19 100.5 243 27.6
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 3.4e-19 100.1 241 28.2
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 3.4e-19 100.1 267 25.8
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 4.5e-19 99.8 246 26.0
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 5.8e-19 99.4 246 26.4
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 7.6e-19 99.0 249 26.5
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 1.0e-18 98.6 249 26.5
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.0e-18 98.6 247 26.7
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.7e-18 97.8 251 25.9
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 2.9e-18 97.1 251 26.3
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 4.9e-18 96.3 252 27.4
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 4.9e-18 96.3 246 25.6
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 8.4e-18 95.5 243 26.7
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 1.4e-17 94.7 247 26.3
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.9e-17 94.4 259 26.3
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 3.2e-17 93.6 245 26.1
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 3.2e-17 93.6 247 26.3
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 5.5e-17 92.8 246 25.6
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 5.5e-17 92.8 266 25.6
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 1.6e-16 91.3 214 27.6
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.7e-16 90.5 202 27.7
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 6.7e-15 85.9 239 27.2
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 5.7e-14 82.8 250 25.2
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 7.4e-14 82.4 240 25.0
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 9.7e-14 82.0 135 31.9
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 3.7e-13 80.1 205 24.9
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 6.3e-13 79.3 216 23.1
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 6.3e-13 79.3 143 30.8
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 2.0e-11 74.3 276 23.6
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 4.5e-11 73.2 290 22.1
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 4.2e-09 66.6 131 28.2
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 1.2e-08 65.1 158 25.3
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 5.1e-07 59.7 263 25.1


User provided reference genes

Program Settings