Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.8e-254 882.1 436 100.0
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.2e-95 353.6 296 61.5
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 5.1e-60 236.1 319 44.2
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 1.6e-58 231.1 353 41.1
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 7.3e-51 205.7 322 41.0
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.1e-49 201.8 347 38.0
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 1.7e-47 194.5 333 37.5
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 3.8e-47 193.4 342 39.5
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.9e-47 193.0 342 37.4
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.9e-46 191.0 328 38.4
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.9e-46 191.0 339 38.6
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 2.4e-46 190.7 339 38.3
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 4.2e-46 189.9 339 36.9
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 9.3e-46 188.7 321 39.3
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 2.7e-45 187.2 338 38.2
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 3.5e-45 186.8 361 36.3
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 3.5e-45 186.8 332 36.7
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 4.6e-45 186.4 338 35.8
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 6.0e-45 186.0 342 35.7
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 6.0e-45 186.0 340 37.1
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 7.8e-45 185.7 339 35.7
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 1.3e-44 184.9 335 35.8
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 1.3e-44 184.9 337 37.4
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 1.7e-44 184.5 336 36.3
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.7e-44 184.5 340 37.4
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.7e-44 184.5 354 37.0
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 2.3e-44 184.1 342 36.3
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.0e-44 183.7 337 37.1
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 3.0e-44 183.7 343 36.4
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 3.0e-44 183.7 322 37.3
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 5.1e-44 183.0 341 36.7
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.1e-44 183.0 328 38.1
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 5.1e-44 183.0 341 36.1
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 6.6e-44 182.6 349 35.0
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 6.6e-44 182.6 338 34.6
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 1.1e-43 181.8 344 37.2
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.5e-43 181.4 355 34.9
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.5e-43 181.4 344 36.9
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.9e-43 181.0 357 34.2
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 2.5e-43 180.6 337 35.6
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 4.3e-43 179.9 347 34.6
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 4.3e-43 179.9 343 35.9
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 5.6e-43 179.5 308 37.7
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.6e-43 179.5 344 37.2
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 5.6e-43 179.5 345 34.5
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 5.6e-43 179.5 339 34.8
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 5.6e-43 179.5 324 37.0
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 7.3e-43 179.1 347 35.4
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 9.6e-43 178.7 335 35.5
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 9.6e-43 178.7 344 34.6
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 1.3e-42 178.3 343 36.2
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.6e-42 177.9 338 35.5
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.1e-42 177.6 342 35.7
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 2.8e-42 177.2 336 35.4
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 2.8e-42 177.2 338 35.8
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 2.8e-42 177.2 356 34.8
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 3.6e-42 176.8 347 35.4
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 3.6e-42 176.8 339 35.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 4.8e-42 176.4 335 35.8
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 4.8e-42 176.4 361 36.8
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 6.2e-42 176.0 344 36.9
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 8.1e-42 175.6 335 35.2
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.1e-41 175.3 332 36.1
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.1e-41 175.3 344 34.9
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.8e-41 174.5 343 34.7
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 5.3e-41 172.9 345 35.7
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 6.9e-41 172.6 345 33.9
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 9.0e-41 172.2 326 35.9
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 1.2e-40 171.8 330 34.8
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.5e-40 171.4 345 33.6
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 2.0e-40 171.0 343 36.2
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 3.4e-40 170.2 356 33.7
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 4.4e-40 169.9 343 35.6
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 7.6e-40 169.1 328 32.9
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.7e-39 167.9 342 33.9
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 8.4e-39 165.6 343 35.6
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 1.4e-38 164.9 359 32.6
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.9e-38 164.5 358 33.5
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 4.2e-38 163.3 299 37.1
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.5e-37 160.2 143 58.0
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 7.9e-37 159.1 280 39.3
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 1.9e-35 154.5 253 36.8
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 2.5e-35 154.1 315 34.6
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 9.6e-35 152.1 244 38.1
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 9.0e-33 145.6 331 33.8
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.2e-32 145.2 323 33.1
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 1.2e-32 145.2 206 41.3
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.5e-32 144.8 356 31.5
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.0e-32 144.4 252 37.3
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 3.4e-32 143.7 348 31.3
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 4.5e-32 143.3 335 32.8
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 5.8e-32 142.9 263 36.1
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 5.8e-32 142.9 298 33.6
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.9e-31 140.6 183 41.0
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 1.4e-30 138.3 272 38.2
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 7.1e-30 136.0 375 29.3
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 2.8e-26 124.0 304 33.2
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 2.8e-26 124.0 265 34.7
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 3.7e-26 123.6 261 36.8
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 4.0e-25 120.2 269 35.3
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 1.5e-24 118.2 258 34.5
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 4.5e-24 116.7 232 37.5
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.9e-23 114.0 280 35.0
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 8.4e-23 112.5 244 34.0
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 8.4e-23 112.5 159 40.9
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 5.5e-22 109.8 226 35.4
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.2e-21 108.6 273 33.0
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.8e-20 104.8 205 36.6
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.1e-17 95.5 233 30.5
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 4.6e-13 80.1 86 43.0
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 7.9e-13 79.3 200 30.0
PRCOL_00006890 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 1.8e-12 78.2 287 26.8
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.3e-10 72.0 76 42.1
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.8e-09 68.2 109 39.4
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 4.1e-09 67.0 75 42.7
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 4.5e-08 63.5 347 23.9
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.9e-07 60.8 188 31.4
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 3.8e-07 60.5 75 44.0
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 6.5e-07 59.7 69 47.8
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-06 58.5 67 50.7


User provided reference genes

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