Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0190 Selaginella moellendorffii HOM05D011042 ORTHO05D377756 2.3e-293 1011.5 513 100.0
SMO200G0200 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 6.0e-286 986.9 513 97.5
SMO200G0176 Selaginella moellendorffii HOM05D011042 ORTHO05D374215 4.3e-284 980.7 536 93.7
SMO209G0005 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 3.3e-260 901.4 521 90.2
SMO337G0046 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 1.8e-221 772.7 426 93.4
SMO356G0254 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 6.7e-221 770.8 522 77.6
SMO146G0231 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 2.9e-208 728.8 533 74.1
SMO351G0063 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 1.3e-171 607.1 463 68.5
SMO173G0013 Selaginella moellendorffii HOM05D011042 ORTHO05D373856 1.4e-162 577.0 531 62.0
SMO173G0046 Selaginella moellendorffii HOM05D011042 ORTHO05D375473 1.7e-160 570.1 392 76.3
SMO111G0065 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 5.6e-151 538.5 457 62.4
SMO173G0062 Selaginella moellendorffii HOM05D011042 ORTHO05D377078 6.2e-150 535.0 473 65.5
SMO146G0195 Selaginella moellendorffii HOM05D011042 ORTHO05D379290 4.3e-111 406.0 401 58.4
SMO170G0009 Selaginella moellendorffii HOM05D011042 ORTHO05D374791 5.0e-83 312.8 475 48.2
SMO141G0164 Selaginella moellendorffii HOM05D011042 ORTHO05D374707 7.3e-50 202.6 308 47.7
SMO356G0492 Selaginella moellendorffii HOM05D011042 ORTHO05D375238 1.8e-48 198.0 389 39.6
SMO356G0441 Selaginella moellendorffii HOM05D011042 ORTHO05D377317 1.3e-38 165.2 216 50.0
SMO141G0289 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 2.4e-16 91.3 187 32.6
SMO013G0025 Selaginella moellendorffii HOM05D011042 ORTHO05D378378 1.2e-15 89.0 159 42.8
Pp3c4_24790 Physcomitrium patens HOM05D003873 ORTHO05D004127 2.6e-15 87.8 193 29.0
Pp3c13_3890 Physcomitrium patens HOM05D003873 ORTHO05D004127 4.5e-15 87.0 175 32.0
Duzib114G0555 Durio zibethinus HOM05D003873 ORTHO05D004127 1.4e-13 82.0 170 31.8
Thecc.10G182200 Theobroma cacao HOM05D003873 ORTHO05D004127 1.9e-13 81.6 172 31.4
SMO170G0066 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 5.5e-13 80.1 175 30.3
QL08p064588 Quercus lobata HOM05D003873 ORTHO05D004127 9.3e-13 79.3 174 32.2
MD01G1164200 Malus domestica HOM05D003873 ORTHO05D004127 1.2e-12 79.0 180 30.6
GSVIVG01032680001 Vitis vinifera HOM05D003873 ORTHO05D004127 1.2e-12 79.0 176 32.4
Rhsim09G0185200 Rhododendron simsii HOM05D003873 ORTHO05D004127 1.6e-12 78.6 181 31.5
Hma1.2p1_0292F.1_g115890 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 3.5e-12 77.4 180 32.8
Hma1.2p1_0292F.1_g115910 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 3.5e-12 77.4 176 32.4
Potri.013G092700 Populus trichocarpa HOM05D003873 ORTHO05D004127 3.5e-12 77.4 179 31.3
Lsat_1_v5_gn_9_122981 Lactuca sativa HOM05D003873 ORTHO05D004127 4.6e-12 77.0 175 28.6
SHI30175 Sapria himalayana HOM05D003873 ORTHO05D004127 4.6e-12 77.0 195 29.2
C04p02110 Brassica napus HOM05D003873 ORTHO05D004127 6.0e-12 76.6 169 32.5
BolC4t21859H Brassica oleracea HOM05D003873 ORTHO05D004127 6.0e-12 76.6 169 32.5
Duzib128G1260 Durio zibethinus HOM05D003873 ORTHO05D004127 1.0e-11 75.9 169 32.0
Mapoly0093s0078 Marchantia polymorpha HOM05D003873 ORTHO05D004127 1.0e-11 75.9 174 31.0
TWI09G0384 Tripterygium wilfordii HOM05D003873 ORTHO05D004127 1.0e-11 75.9 176 31.8
vmacro09968 Vaccinium macrocarpon HOM05D003873 ORTHO05D004127 1.0e-11 75.9 149 34.2
SMO141G0106 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.3e-11 75.5 175 28.0
BolC4t28343H Brassica oleracea HOM05D000114 ORTHO05D004127 1.8e-11 75.1 213 28.6
CiPaw.02G198500 Carya illinoinensis HOM05D003873 ORTHO05D004127 3.0e-11 74.3 177 32.8
Lsat_1_v5_gn_8_13601 Lactuca sativa HOM05D003873 ORTHO05D004127 3.0e-11 74.3 175 28.6
Hund15823 Selenicereus undatus HOM05D003873 ORTHO05D004127 3.0e-11 74.3 220 26.8
A05p01810 Brassica napus HOM05D003873 ORTHO05D004127 3.9e-11 73.9 169 31.4
PGR044G2565 Punica granatum HOM05D003873 ORTHO05D004127 3.9e-11 73.9 169 31.4
Carub.0004s2288 Capsella rubella HOM05D003873 ORTHO05D004127 5.1e-11 73.6 169 30.8
Sp4g22920 Schrenkiella parvula HOM05D003873 ORTHO05D004127 6.7e-11 73.2 169 31.4
SMO119G0134 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 6.7e-11 73.2 147 32.7
Atru.chr1.2930 Acer truncatum HOM05D003873 ORTHO05D004127 8.7e-11 72.8 175 29.7
AT2G40600 Arabidopsis thaliana HOM05D003873 ORTHO05D004127 8.7e-11 72.8 169 31.4
BcaC02g12725 Brassica carinata HOM05D003873 ORTHO05D004127 8.7e-11 72.8 169 32.0
SMO119G0485 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 8.7e-11 72.8 147 33.3
BraA04t18560Z Brassica rapa HOM05D000114 ORTHO05D004127 1.1e-10 72.4 169 31.4
Lj1g0013289 Lotus japonicus HOM05D003873 ORTHO05D004127 1.1e-10 72.4 177 29.4
A04p31040 Brassica napus HOM05D000114 ORTHO05D004127 1.9e-10 71.6 169 31.4
CARHR135690 Cardamine hirsuta HOM05D003873 ORTHO05D004127 1.9e-10 71.6 169 30.8
PSO210G0819 Papaver somniferum HOM05D000620 ORTHO05D000537 1.9e-10 71.6 184 29.3
BcaC02g07324 Brassica carinata HOM05D000114 ORTHO05D004127 2.5e-10 71.2 169 31.4
C04p68430 Brassica napus HOM05D000114 ORTHO05D004127 2.5e-10 71.2 169 31.4
BcaB06g29154 Brassica carinata HOM05D003873 ORTHO05D004127 3.3e-10 70.9 169 31.4
BraA05t19179Z Brassica rapa HOM05D003873 ORTHO05D004127 3.3e-10 70.9 177 29.9
SMO198G0098 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 3.3e-10 70.9 174 30.5
Atru.BG.255.p Acer truncatum HOM05D003873 ORTHO05D004127 4.3e-10 70.5 168 28.6
AUR62030624 Chenopodium quinoa HOM05D003873 ORTHO05D004127 4.3e-10 70.5 180 29.4
Ciclev10002574m.g Citrus clementina HOM05D003873 ORTHO05D004127 5.6e-10 70.1 185 30.8
Sed0001367 Sechium edule HOM05D003873 ORTHO05D004127 5.6e-10 70.1 177 30.5
ATR1127G039 Amborella trichopoda HOM05D003873 ORTHO05D004127 1.3e-09 68.9 149 32.2
AL4G38470 Arabidopsis lyrata HOM05D003873 ORTHO05D004127 1.6e-09 68.6 190 30.5
Carub.0004s2289 Capsella rubella HOM05D003873 ORTHO05D004127 1.6e-09 68.6 197 31.0
TPR.G3290 Trifolium pratense HOM05D003873 ORTHO05D004127 1.6e-09 68.6 172 29.1
CARHR135710 Cardamine hirsuta HOM05D003873 ORTHO05D004127 2.1e-09 68.2 169 30.8
MBI03_g22825_MAGBIO Magnolia biondii HOM05D003873 ORTHO05D004127 2.1e-09 68.2 168 29.8
EL10Ac2g02628 Beta vulgaris HOM05D003873 ORTHO05D004127 3.7e-09 67.4 171 31.0
SMO147G0042 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 3.7e-09 67.4 169 29.6
SEGI_07333 Sequoiadendron giganteum HOM05D003873 ORTHO05D004127 3.7e-09 67.4 149 32.9
Sc11g0005790 Simmondsia chinensis HOM05D003873 ORTHO05D004127 6.2e-09 66.6 169 31.4
Cre07.g336850 Chlamydomonas reinhardtii HOM05D003873 ORTHO05D004127 1.4e-08 65.5 106 36.8
PSO210G5103 Papaver somniferum HOM05D000620 ORTHO05D000537 1.4e-08 65.5 217 28.1
Sp4g22930 Schrenkiella parvula HOM05D003873 ORTHO05D004127 1.8e-08 65.1 190 30.5
SMO198G0073 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.8e-08 65.1 149 28.2
Atru.chr3.3508 Acer truncatum HOM05D003873 ORTHO05D004127 3.1e-08 64.3 145 31.0
Atru.chr3.3515 Acer truncatum HOM05D003873 ORTHO05D004127 3.1e-08 64.3 145 31.0
Aa31LG3G1520 Aethionema arabicum HOM05D003873 ORTHO05D004127 4.0e-08 63.9 97 35.1
PSO384G3509 Papaver somniferum HOM05D003873 ORTHO05D004127 2.0e-07 61.6 169 29.0
SMO353G0256 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 4.5e-07 60.5 153 24.2
PSO017G0702 Papaver somniferum HOM05D003873 ORTHO05D004127 5.8e-07 60.1 169 28.4
SMO170G0014 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 7.6e-07 59.7 160 30.6
SMO171G0118 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.0e-06 59.3 156 23.7
SalBow3G4343 Salvia bowleyana HOM05D003873 ORTHO05D004127 6.5e-06 56.6 70 41.4
Hma1.2p1_0292F.1_g115900 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 8.4e-06 56.2 126 31.7


User provided reference genes

Program Settings