Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0149 Selaginella moellendorffii HOM05D003215 ORTHO05D003735 5.0e-255 884.4 613 100.0
HanXRQChr10g0309901 Helianthus annuus HOM05D003215 ORTHO05D003735 5.9e-14 83.6 219 28.8
Sopen08g003240 Solanum pennellii HOM05D003215 ORTHO05D003735 1.5e-12 79.0 248 29.0
Solyc08g007300.3 Solanum lycopersicum HOM05D003215 ORTHO05D003735 5.5e-12 77.0 247 27.1
Aa31LG9G750 Aethionema arabicum HOM05D003215 ORTHO05D003735 1.6e-11 75.5 177 27.7
Nitab4.5_0000712g0010 Nicotiana tabacum HOM05D003215 ORTHO05D003735 3.6e-11 74.3 244 27.5
Ciclev10030284m.g Citrus clementina HOM05D003215 ORTHO05D003735 1.4e-10 72.4 187 29.4
HanXRQChr11g0328481 Helianthus annuus HOM05D003215 ORTHO05D003735 1.8e-10 72.0 216 29.2
Peaxi162Scf00029g00131 Petunia axillaris HOM05D003215 ORTHO05D003735 2.3e-10 71.6 227 27.3
Sp7g00890 Schrenkiella parvula HOM05D003215 ORTHO05D003735 3.0e-10 71.2 221 28.5
BolC4t26400H Brassica oleracea HOM05D003215 ORTHO05D003735 4.0e-10 70.9 224 26.8
ClCG05G001940 Citrullus lanatus HOM05D003215 ORTHO05D003735 4.0e-10 70.9 217 27.2
BcaB06g27584 Brassica carinata HOM05D003215 ORTHO05D003735 5.2e-10 70.5 219 26.9
Lj1g0005602 Lotus japonicus HOM05D003215 ORTHO05D003735 8.8e-10 69.7 242 26.4
C04p48090 Brassica napus HOM05D003215 ORTHO05D003735 1.2e-09 69.3 215 27.4
Nitab4.5_0000712g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 1.2e-09 69.3 181 27.6
CAN.G861.12 Capsicum annuum HOM05D003215 ORTHO05D003735 1.5e-09 68.9 253 25.3
Nitab4.5_0000185g0060 Nicotiana tabacum HOM05D003215 ORTHO05D003735 1.5e-09 68.9 228 27.6
Nitab4.5_0000185g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 2.6e-09 68.2 181 27.6
Aa31LG9G1040 Aethionema arabicum HOM05D003215 ORTHO05D003735 3.3e-09 67.8 190 27.9
LjContig00081g0004985 Lotus japonicus HOM05D003215 ORTHO05D003735 4.4e-09 67.4 194 28.4
BcaC02g08984 Brassica carinata HOM05D003215 ORTHO05D003735 7.5e-09 66.6 196 26.0
A04p14060 Brassica napus HOM05D003215 ORTHO05D003735 7.5e-09 66.6 225 25.8
Cpa.g.sc65.22 Carica papaya HOM05D003215 ORTHO05D003735 7.5e-09 66.6 274 24.8
Eucgr.H02514 Eucalyptus grandis HOM05D003215 ORTHO05D003735 7.5e-09 66.6 250 26.8
Thhalv10027663m.g Eutrema salsugineum HOM05D003215 ORTHO05D003735 7.5e-09 66.6 187 25.7
CAN.G3121.3 Capsicum annuum HOM05D003215 ORTHO05D003735 1.7e-08 65.5 226 25.7
Hma1.2p1_0892F.1_g233410 Hydrangea macrophylla HOM05D003215 ORTHO05D003735 1.7e-08 65.5 271 24.7
BcaC09g51256 Brassica carinata HOM05D003215 ORTHO05D003735 2.2e-08 65.1 179 25.7
Sed0005911 Sechium edule HOM05D003215 ORTHO05D003735 2.2e-08 65.1 226 26.5
BcaNung03841 Brassica carinata HOM05D003215 ORTHO05D003735 2.8e-08 64.7 177 27.7
Atru.chr3.3574 Acer truncatum HOM05D003215 ORTHO05D003735 3.7e-08 64.3 147 28.6
CsaV3_3G009340 Cucumis sativus L. HOM05D003215 ORTHO05D003735 3.7e-08 64.3 182 29.1
Glyma.13G128500 Glycine max HOM05D003215 ORTHO05D003735 3.7e-08 64.3 179 28.5
CiPaw.15G124500 Carya illinoinensis HOM05D003215 ORTHO05D003735 6.3e-08 63.5 215 24.7
Nitab4.5_0000712g0020 Nicotiana tabacum HOM05D003215 ORTHO05D003735 6.3e-08 63.5 262 25.6
MELO3C006154.2 Cucumis melo HOM05D003215 ORTHO05D003735 8.2e-08 63.2 182 28.6
BraA04t17067Z Brassica rapa HOM05D003215 ORTHO05D003735 1.1e-07 62.8 282 23.0
Sopen08g019870 Solanum pennellii HOM05D003215 ORTHO05D003735 1.1e-07 62.8 277 24.5
CiPaw.11G100100 Carya illinoinensis HOM05D003215 ORTHO05D003735 1.4e-07 62.4 215 25.6
Lj3g0014709 Lotus japonicus HOM05D003215 ORTHO05D003735 1.8e-07 62.0 251 26.7
Manes.11G149200 Manihot esculenta HOM05D003215 ORTHO05D003735 1.8e-07 62.0 280 26.8
Nitab4.5_0004170g0030 Nicotiana tabacum HOM05D003215 ORTHO05D003735 1.8e-07 62.0 309 22.3
Ca_14134_v3 Cicer arietinum L. HOM05D003215 ORTHO05D003735 3.1e-07 61.2 191 27.7
Lj4C665T1 Lonicera japonica HOM05D003215 ORTHO05D003735 3.1e-07 61.2 304 26.3
Sc24g0002070 Simmondsia chinensis HOM05D003215 ORTHO05D003735 4.1e-07 60.8 190 24.2
TPR.G16275 Trifolium pratense HOM05D003215 ORTHO05D003735 4.1e-07 60.8 188 27.7
Sopen03g029820 Solanum pennellii HOM05D003215 ORTHO05D003735 5.3e-07 60.5 226 23.9
HanXRQChr04g0095001 Helianthus annuus HOM05D000008 ORTHO05D019106 7.0e-07 60.1 112 31.2
HanXRQChr04g0094991 Helianthus annuus HOM05D000008 ORTHO05D019106 9.1e-07 59.7 112 33.0
PGR083G2356 Punica granatum HOM05D003215 ORTHO05D003735 9.1e-07 59.7 215 27.9
Nn7g37196 Nelumbo nucifera HOM05D003215 ORTHO05D003735 1.6e-06 58.9 324 25.0
RcHm_v2.0_Chr5g0058161 Rosa chinensis HOM05D003215 ORTHO05D003735 1.6e-06 58.9 224 25.0
THA.LOC104820428 Tarenaya hassleriana HOM05D000008 ORTHO05D000005 1.6e-06 58.9 111 33.3
Aa31LG2G11290 Aethionema arabicum HOM05D000008 ORTHO05D000005 2.0e-06 58.5 111 31.5
Carub.0002s0708 Capsella rubella HOM05D000008 ORTHO05D000005 2.0e-06 58.5 111 32.4
PSO151G0221 Papaver somniferum HOM05D000119 ORTHO05D000054 2.0e-06 58.5 197 28.9
PSO339G3765 Papaver somniferum HOM05D000119 ORTHO05D000054 2.0e-06 58.5 197 28.9
Atru.chr3.3575 Acer truncatum HOM05D003215 ORTHO05D003735 2.7e-06 58.2 187 25.7
AT1G57560 Arabidopsis thaliana HOM05D000008 ORTHO05D000005 2.7e-06 58.2 111 32.4
C05p07540 Brassica napus HOM05D000008 ORTHO05D000005 3.5e-06 57.8 111 31.5
BolC5t29508H Brassica oleracea HOM05D000008 ORTHO05D000005 3.5e-06 57.8 111 31.5
unitig_52.g17692 Utricularia gibba HOM05D003215 ORTHO05D003735 3.5e-06 57.8 296 24.7
Mapoly0057s0043 Marchantia polymorpha HOM05D003215 ORTHO05D003735 4.5e-06 57.4 313 25.9
QL11p011498 Quercus lobata HOM05D000008 ORTHO05D000005 4.5e-06 57.4 111 29.7
arahy.Tifrunner.gnm1.ann1.QI0PHV Arachis hypogaea HOM05D000008 ORTHO05D000005 5.9e-06 57.0 111 31.5
BcaB03g13300 Brassica carinata HOM05D000008 ORTHO05D000005 5.9e-06 57.0 111 31.5
CARHR265230 Cardamine hirsuta HOM05D000008 ORTHO05D003936 5.9e-06 57.0 111 30.6
COL.COLO4_34418 Corchorus olitorius HOM05D000119 ORTHO05D000054 5.9e-06 57.0 137 29.9
Thhalv10008000m.g Eutrema salsugineum HOM05D000008 ORTHO05D000005 5.9e-06 57.0 111 31.5
Lsat_1_v5_gn_1_35681 Lactuca sativa HOM05D000008 ORTHO05D000005 5.9e-06 57.0 112 30.4
Lj4C675G2 Lonicera japonica HOM05D003215 ORTHO05D003735 5.9e-06 57.0 278 24.5
Sp1g08140 Schrenkiella parvula HOM05D000008 ORTHO05D000005 5.9e-06 57.0 111 32.4
Solyc08g066190.2 Solanum lycopersicum HOM05D003215 ORTHO05D003735 5.9e-06 57.0 307 23.8
vmacro10400 Vaccinium macrocarpon HOM05D003215 ORTHO05D003735 5.9e-06 57.0 224 23.7
arahy.Tifrunner.gnm1.ann1.DS6HR7 Arachis hypogaea HOM05D000008 ORTHO05D000005 7.7e-06 56.6 111 31.5
CDE08G0793 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 7.7e-06 56.6 111 30.6
CsaV3_2G007390 Cucumis sativus L. HOM05D000008 ORTHO05D000005 7.7e-06 56.6 111 30.6
Solyc11g071300.2 Solanum lycopersicum HOM05D000119 ORTHO05D000054 7.7e-06 56.6 205 24.9
Sopen11g028980 Solanum pennellii HOM05D000119 ORTHO05D000054 7.7e-06 56.6 205 24.9


User provided reference genes

Program Settings