Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.7e-160 568.5 275 100.0
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 7.9e-144 513.8 280 89.6
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 8.8e-135 483.8 268 89.9
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 9.0e-63 244.6 280 46.4
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 1.9e-57 226.9 281 44.1
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 7.3e-57 224.9 281 43.8
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 9.6e-57 224.6 281 43.1
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.3e-56 224.2 281 43.1
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.6e-56 222.6 281 43.1
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.1e-55 221.1 281 42.7
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.1e-55 221.1 281 42.3
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.4e-55 220.7 283 44.2
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 1.8e-55 220.3 280 43.2
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.4e-55 219.9 280 43.2
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 3.1e-55 219.5 281 42.7
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 4.0e-55 219.2 283 41.3
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 4.0e-55 219.2 283 44.2
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 2.0e-54 216.9 283 43.5
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 5.8e-54 215.3 282 40.8
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 9.9e-54 214.5 278 41.7
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 9.9e-54 214.5 278 42.8
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.2e-53 213.4 283 41.0
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 2.2e-53 213.4 284 40.5
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 2.9e-53 213.0 283 40.3
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 2.9e-53 213.0 282 42.9
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 2.9e-53 213.0 280 42.5
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 3.8e-53 212.6 285 40.4
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 4.9e-53 212.2 283 39.9
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 4.9e-53 212.2 283 41.3
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 6.4e-53 211.8 282 40.4
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 6.4e-53 211.8 283 41.0
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 8.4e-53 211.5 283 40.3
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 8.4e-53 211.5 283 41.7
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 1.4e-52 210.7 281 41.3
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.9e-52 210.3 281 40.9
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-52 210.3 270 42.2
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.9e-52 210.3 281 41.3
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 2.4e-52 209.9 284 40.8
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.2e-52 209.5 283 40.6
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 3.2e-52 209.5 284 41.9
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 5.5e-52 208.8 280 40.0
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 5.5e-52 208.8 282 41.5
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 5.5e-52 208.8 279 39.4
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 7.1e-52 208.4 283 40.6
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 7.1e-52 208.4 278 39.6
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 9.3e-52 208.0 283 41.7
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 9.3e-52 208.0 280 41.8
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 2.1e-51 206.8 283 40.6
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.1e-51 206.8 282 41.1
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 2.7e-51 206.5 282 41.8
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 4.6e-51 205.7 283 39.9
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.6e-51 205.7 283 41.7
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 6.0e-51 205.3 280 39.3
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 7.9e-51 204.9 282 41.8
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.0e-50 204.5 283 39.6
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.8e-50 203.8 281 39.9
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.8e-50 203.8 281 39.9
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 3.0e-50 203.0 253 41.1
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 3.0e-50 203.0 281 40.2
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.1e-49 201.1 284 39.4
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 1.1e-49 201.1 284 41.2
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.3e-49 199.1 283 40.6
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 7.4e-49 198.4 289 39.4
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 9.6e-49 198.0 281 38.1
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 9.6e-49 198.0 285 39.3
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.6e-48 197.2 281 40.6
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.6e-48 197.2 283 40.3
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 2.1e-48 196.8 255 45.1
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 2.1e-48 196.8 280 39.3
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 2.1e-48 196.8 314 36.6
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 2.1e-48 196.8 283 40.3
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 4.8e-48 195.7 281 39.5
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 8.1e-48 194.9 285 38.6
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 8.1e-48 194.9 283 38.5
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 1.4e-47 194.1 322 36.0
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.4e-47 194.1 284 40.1
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 1.8e-47 193.7 281 39.5
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 9.0e-47 191.4 287 39.0
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 9.0e-47 191.4 281 39.1
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 1.2e-46 191.0 261 40.6
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 2.6e-46 189.9 300 37.3
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 4.5e-46 189.1 281 39.5
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 7.6e-46 188.3 260 39.6
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 1.9e-44 183.7 280 39.3
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 2.5e-44 183.3 212 46.2
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 7.1e-44 181.8 278 38.5
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.6e-43 180.6 259 37.1
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 2.7e-43 179.9 282 39.0
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 4.6e-43 179.1 281 39.1
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 2.3e-42 176.8 278 35.6
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 3.0e-42 176.4 278 36.3
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 3.9e-42 176.0 254 38.2
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 5.7e-41 172.2 278 37.4
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 5.7e-41 172.2 276 35.9
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 3.7e-40 169.5 190 45.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 1.2e-38 164.5 242 37.6
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 2.0e-38 163.7 253 36.4
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 4.5e-38 162.5 157 48.4
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 5.9e-38 162.2 277 38.6
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 7.6e-38 161.8 188 44.7
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 3.8e-37 159.5 288 34.4
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 6.5e-37 158.7 249 36.1
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 1.4e-36 157.5 283 33.2
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 9.3e-36 154.8 190 42.6
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 9.3e-36 154.8 249 35.3
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 1.2e-35 154.5 284 35.2
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 1.3e-34 151.0 280 35.4
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.8e-34 150.6 207 40.6
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 2.3e-34 150.2 220 37.7
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 4.3e-33 146.0 220 37.3
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 9.0e-31 138.3 190 40.0
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 2.0e-30 137.1 265 33.6
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.0e-29 134.8 137 45.3
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 2.5e-28 130.2 250 33.2
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 2.5e-25 120.2 200 36.5
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 2.8e-24 116.7 126 47.6
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 4.8e-24 115.9 195 37.4
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 5.3e-23 112.5 320 28.1
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.5e-22 110.9 121 43.8
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.4e-22 109.8 119 43.7
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 3.8e-21 106.3 119 42.0
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 5.0e-21 105.9 258 29.8
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 8.5e-21 105.1 125 46.4
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 6.1e-19 99.0 121 43.0
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.5e-17 94.4 168 35.7
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 7.4e-17 92.0 88 45.5
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.2e-16 90.5 94 40.4
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 8.2e-16 88.6 156 35.9
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.3e-15 85.9 114 39.5
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 6.5e-13 79.0 228 28.5
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.8e-08 63.5 80 37.5
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 1.4e-07 61.2 63 42.9
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 3.5e-06 56.6 65 43.1


User provided reference genes

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