Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0038 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.0e-151 540.0 266 100.0
SMO200G0233 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 9.9e-75 284.3 248 66.5
SMO024G0003 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.8e-66 255.8 300 55.0
SMO200G0119 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 7.6e-59 231.5 220 61.4
SMO089G0014 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.1e-57 227.6 284 54.6
SMO200G0172 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.4e-57 226.5 219 60.7
SMO200G0133 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.5e-56 222.6 193 64.8
SMO200G0253 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.5e-42 175.3 302 46.4
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 5.1e-39 165.6 441 35.8
SMO089G0017 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.1e-36 157.9 176 56.8
SMO200G0165 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.3e-21 107.8 339 31.6
SMO307G0058 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 1.7e-21 107.5 264 36.0
SMO001G0006 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 6.5e-18 95.5 305 33.4
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 1.4e-12 77.8 94 45.7
Lj9A475G63 Lonicera japonica HOM05D005301 ORTHO05D006433 5.3e-12 75.9 82 50.0
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 9.1e-12 75.1 94 43.6
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 1.2e-11 74.7 94 43.6
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 2.6e-11 73.6 94 44.7
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 2.6e-11 73.6 94 43.6
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 3.5e-11 73.2 94 43.6
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 4.5e-11 72.8 94 42.6
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 7.7e-11 72.0 94 42.6
Cpa.g.sc52.37 Carica papaya HOM05D005301 ORTHO05D006433 7.7e-11 72.0 94 42.6
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 7.7e-11 72.0 94 41.5
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 1.0e-10 71.6 94 42.6
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 1.0e-10 71.6 94 41.5
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 1.0e-10 71.6 94 41.5
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 1.0e-10 71.6 94 41.5
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 1.3e-10 71.2 94 42.6
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 1.7e-10 70.9 94 41.5
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 1.7e-10 70.9 92 42.4
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 2.2e-10 70.5 94 41.5
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 2.2e-10 70.5 94 41.5
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 41.5
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 40.4
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 2.9e-10 70.1 94 43.6
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 3.8e-10 69.7 94 41.5
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 3.8e-10 69.7 94 41.5
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 3.8e-10 69.7 94 40.4
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 3.8e-10 69.7 94 39.4
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 5.0e-10 69.3 94 41.5
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 5.0e-10 69.3 94 41.5
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 5.0e-10 69.3 94 40.4
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 5.0e-10 69.3 94 41.5
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 6.5e-10 68.9 94 41.5
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 6.5e-10 68.9 94 41.5
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 6.5e-10 68.9 94 41.5
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 6.5e-10 68.9 94 41.5
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 6.5e-10 68.9 94 41.5
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 8.5e-10 68.6 86 44.2
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 1.1e-09 68.2 94 40.4
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 1.1e-09 68.2 94 42.6
CBR_g40809 Chara braunii HOM05D005301 ORTHO05D006433 1.5e-09 67.8 94 40.4
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 1.5e-09 67.8 153 32.0
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 1.5e-09 67.8 94 41.5
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 1.5e-09 67.8 94 39.4
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 2.5e-09 67.0 94 40.4
HPP92_004584 Vanilla planifolia HOM05D005301 ORTHO05D006433 2.5e-09 67.0 117 36.8
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 40.4
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 40.4
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 40.4
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 40.4
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 40.4
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 40.4
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 3.2e-09 66.6 94 39.4
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 4.2e-09 66.2 94 40.4
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 4.2e-09 66.2 94 40.4
CAN.G352.12 Capsicum annuum HOM05D005301 ORTHO05D006433 5.5e-09 65.9 54 59.3
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 40.4
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 39.4
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 40.4
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 38.3
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 40.4
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 38.3
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 40.4
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 5.5e-09 65.9 94 40.4
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 7.2e-09 65.5 94 40.4
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 7.2e-09 65.5 94 39.4
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 7.2e-09 65.5 94 39.4
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 7.2e-09 65.5 94 40.4
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 9.4e-09 65.1 94 38.3
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 9.4e-09 65.1 94 39.4
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 9.4e-09 65.1 94 40.4
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 9.4e-09 65.1 94 40.4
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 1.2e-08 64.7 93 39.8
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 1.2e-08 64.7 94 38.3
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 1.6e-08 64.3 94 39.4
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 1.6e-08 64.3 94 39.4
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 2.1e-08 63.9 94 39.4
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 2.1e-08 63.9 94 39.4
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 2.1e-08 63.9 94 39.4
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 2.1e-08 63.9 94 39.4
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 3.6e-08 63.2 94 38.3
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 6.1e-08 62.4 141 31.9
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 6.1e-08 62.4 94 38.3
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 1.4e-07 61.2 88 40.9
QL04p021669 Quercus lobata HOM05D005301 ORTHO05D006433 1.4e-07 61.2 94 37.2
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 1.4e-07 61.2 94 37.2
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 2.3e-07 60.5 94 37.2
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 1.5e-06 57.8 91 37.4
SMO001G0008 Selaginella moellendorffii HOM05D005301 ORTHO05D374631 5.7e-06 55.8 122 38.5


User provided reference genes

Program Settings