Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.6e-150 536.2 291 100.0
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.1e-63 247.7 263 54.4
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 4.9e-59 232.3 257 51.8
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 1.1e-47 194.5 261 46.7
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 2.3e-40 170.2 205 48.3
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 2.3e-40 170.2 224 44.6
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.6e-38 164.1 256 38.3
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.6e-38 164.1 244 41.8
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.8e-37 160.6 254 38.6
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.4e-37 160.2 225 41.8
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 3.1e-37 159.8 254 38.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 4.0e-37 159.5 243 40.7
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.2e-36 157.9 245 40.0
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.5e-36 157.5 231 42.0
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.5e-36 157.5 243 40.7
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.5e-36 157.5 223 40.4
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 2.0e-36 157.1 255 39.2
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 2.6e-36 156.8 256 41.0
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 4.4e-36 156.0 228 41.2
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 5.8e-36 155.6 245 38.0
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 5.8e-36 155.6 246 38.6
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 9.9e-36 154.8 244 41.0
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 9.9e-36 154.8 245 38.0
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 9.9e-36 154.8 246 38.2
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 9.9e-36 154.8 243 39.5
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.7e-35 154.1 253 40.3
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.7e-35 154.1 245 37.6
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 1.7e-35 154.1 239 41.4
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 1.7e-35 154.1 241 40.2
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.2e-35 153.7 244 38.1
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 2.2e-35 153.7 246 38.6
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 2.9e-35 153.3 258 37.6
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.9e-35 153.3 253 39.9
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 2.9e-35 153.3 241 39.0
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 3.8e-35 152.9 253 38.3
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 3.8e-35 152.9 246 39.4
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 4.9e-35 152.5 247 39.3
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 4.9e-35 152.5 239 38.9
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 6.4e-35 152.1 244 38.1
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 8.4e-35 151.8 236 43.2
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 8.4e-35 151.8 241 39.8
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 8.4e-35 151.8 247 36.8
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 8.4e-35 151.8 250 39.2
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 1.4e-34 151.0 244 38.5
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 1.4e-34 151.0 244 38.1
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.9e-34 150.6 253 38.7
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 1.9e-34 150.6 231 39.8
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 2.4e-34 150.2 240 40.8
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 2.4e-34 150.2 240 41.2
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 2.4e-34 150.2 238 39.9
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 2.4e-34 150.2 240 38.8
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.2e-34 149.8 241 38.2
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 4.2e-34 149.4 241 38.2
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.2e-34 149.4 239 39.3
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.2e-34 149.4 241 40.2
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 4.2e-34 149.4 246 38.2
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 4.2e-34 149.4 237 38.4
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 4.2e-34 149.4 242 39.3
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 5.4e-34 149.1 241 38.2
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 5.4e-34 149.1 241 38.2
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 5.4e-34 149.1 241 38.2
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 5.4e-34 149.1 238 39.5
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 5.4e-34 149.1 247 39.3
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 5.4e-34 149.1 238 39.1
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 7.1e-34 148.7 240 40.0
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 7.1e-34 148.7 236 39.4
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 7.1e-34 148.7 238 39.5
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 7.1e-34 148.7 241 39.0
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 9.3e-34 148.3 243 38.3
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 9.3e-34 148.3 239 38.1
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 9.3e-34 148.3 240 40.8
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 9.3e-34 148.3 240 40.8
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 1.2e-33 147.9 244 38.5
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.6e-33 147.5 249 38.6
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 1.6e-33 147.5 239 38.5
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 1.6e-33 147.5 261 37.9
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.6e-33 147.5 239 39.7
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 2.1e-33 147.1 247 38.1
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 2.1e-33 147.1 241 39.0
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 2.1e-33 147.1 237 40.1
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 2.7e-33 146.7 253 39.1
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 2.7e-33 146.7 236 39.8
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 2.7e-33 146.7 226 40.3
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 2.7e-33 146.7 238 39.1
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 2.7e-33 146.7 238 38.7
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 3.5e-33 146.4 237 38.4
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.5e-33 146.4 246 39.0
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 4.6e-33 146.0 224 41.5
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 6.0e-33 145.6 234 42.3
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 6.0e-33 145.6 245 37.6
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 6.0e-33 145.6 236 41.5
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 7.8e-33 145.2 254 42.1
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 7.8e-33 145.2 239 38.5
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 7.8e-33 145.2 239 37.7
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 1.0e-32 144.8 238 39.5
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.0e-32 144.8 239 37.2
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 3.9e-32 142.9 229 39.7
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 5.1e-32 142.5 240 39.2
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 5.1e-32 142.5 256 36.7
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 5.1e-32 142.5 211 41.2
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 5.1e-32 142.5 239 38.5
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 6.6e-32 142.1 239 37.2
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 6.6e-32 142.1 231 41.1
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 6.6e-32 142.1 238 39.1
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 8.7e-32 141.7 239 37.2
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.1e-31 141.4 240 37.9
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.5e-31 141.0 255 36.1
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 1.5e-31 141.0 249 38.6
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 1.5e-31 141.0 239 38.1
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.9e-31 140.6 232 38.4
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 2.5e-31 140.2 237 40.1
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 2.5e-31 140.2 231 38.1
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 3.3e-31 139.8 240 37.5
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.3e-31 139.8 238 38.2
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 5.6e-31 139.0 243 38.7
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 5.6e-31 139.0 237 41.4
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 9.6e-31 138.3 245 38.4
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 9.6e-31 138.3 241 38.2
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 1.3e-30 137.9 246 38.2
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 1.3e-30 137.9 245 37.6
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 1.6e-30 137.5 240 41.2
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.6e-30 137.5 253 38.7
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 2.1e-30 137.1 248 36.3
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 2.1e-30 137.1 247 37.2
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 2.8e-30 136.7 239 39.3
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 2.8e-30 136.7 305 33.1
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 3.6e-30 136.3 239 39.3
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 4.8e-30 136.0 239 38.5
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 8.1e-30 135.2 251 37.8
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 3.1e-29 133.3 230 40.9
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 2.0e-28 130.6 228 38.2
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 2.6e-28 130.2 241 36.9
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 4.4e-28 129.4 237 36.7
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 5.8e-28 129.0 243 35.8
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 7.6e-28 128.6 226 35.4
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 9.9e-28 128.3 223 37.2
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 9.9e-28 128.3 239 36.8
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 1.3e-27 127.9 242 37.2
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 2.2e-27 127.1 235 35.7
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.9e-27 126.7 290 32.8
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 2.9e-27 126.7 224 39.3
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 3.8e-27 126.3 226 35.8
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 1.1e-26 124.8 254 31.9
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 2.1e-25 120.6 197 39.1
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 7.8e-25 118.6 221 38.0
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 1.0e-24 118.2 212 39.2
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.3e-24 117.9 230 34.8
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 3.9e-24 116.3 248 35.1
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 2.8e-22 110.2 243 33.3
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 4.5e-20 102.8 180 38.9
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.7e-19 100.9 190 36.3
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 7.1e-18 95.5 182 34.1
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 2.1e-17 94.0 39 100.0
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 2.7e-17 93.6 210 33.8
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 4.6e-17 92.8 164 38.4
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.5e-15 87.8 88 53.4
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 1.9e-15 87.4 246 30.9
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 5.6e-15 85.9 180 33.3
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 7.4e-15 85.5 197 34.0
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 2.1e-14 84.0 214 31.8
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 5.3e-13 79.3 190 33.7
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 9.0e-13 78.6 50 66.0
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 2.0e-12 77.4 194 34.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 2.6e-12 77.0 59 57.6
VMungo1383G0643 Vigna mungo HOM05D004124 ORTHO05D004779 3.4e-12 76.6 168 33.9
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 3.4e-12 76.6 178 34.8
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 7.6e-12 75.5 48 62.5
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 7.6e-12 75.5 185 32.4
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 7.6e-12 75.5 51 60.8
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.3e-11 74.7 195 34.4
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.7e-09 67.0 57 56.1
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 1.3e-08 64.7 125 33.6
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 3.0e-08 63.5 30 83.3
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 3.3e-07 60.1 54 51.9
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 5.7e-07 59.3 160 30.6


User provided reference genes

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