Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.9e-56 222.2 110 100.0
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.4e-35 151.0 75 96.0
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.9e-28 128.6 86 67.4
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.9e-28 128.6 86 67.4
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 8.3e-28 127.1 86 66.3
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.1e-27 126.7 92 67.4
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.4e-27 126.3 85 67.1
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.4e-27 126.3 85 67.1
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.9e-27 125.9 86 67.4
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.9e-27 125.9 85 67.1
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 2.4e-27 125.6 85 65.9
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 2.4e-27 125.6 85 67.1
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 3.2e-27 125.2 85 65.9
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 4.1e-27 124.8 86 65.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 5.4e-27 124.4 85 65.9
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 5.4e-27 124.4 86 66.3
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 5.4e-27 124.4 86 66.3
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 7.1e-27 124.0 85 65.9
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 7.1e-27 124.0 85 65.9
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 7.1e-27 124.0 86 66.3
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 65.1
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 65.1
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 65.1
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 65.1
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 66.3
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 9.2e-27 123.6 85 63.5
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 65.1
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.2e-27 123.6 86 65.1
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.2e-26 123.2 86 64.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.2e-26 123.2 86 64.0
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.2e-26 123.2 86 66.3
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 1.2e-26 123.2 86 65.1
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 1.6e-26 122.9 86 64.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 1.6e-26 122.9 86 64.0
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.6e-26 122.9 86 64.0
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.6e-26 122.9 84 66.7
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.1e-26 122.5 84 67.9
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 64.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 65.1
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 64.0
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 64.0
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 64.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 64.0
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 66.3
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.1e-26 122.5 84 67.9
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 66.3
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 2.1e-26 122.5 86 65.1
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 2.7e-26 122.1 86 64.0
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.7e-26 122.1 86 62.8
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 2.7e-26 122.1 86 65.1
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.7e-26 122.1 86 65.1
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 3.5e-26 121.7 92 60.9
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 3.5e-26 121.7 86 64.0
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 3.5e-26 121.7 86 64.0
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.5e-26 121.7 84 66.7
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 4.6e-26 121.3 86 65.1
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 4.6e-26 121.3 84 66.7
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 4.6e-26 121.3 86 66.3
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 4.6e-26 121.3 86 62.8
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 4.6e-26 121.3 84 66.7
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 6.0e-26 120.9 86 66.3
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 6.0e-26 120.9 86 64.0
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 6.0e-26 120.9 86 65.1
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 6.0e-26 120.9 86 66.3
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 7.8e-26 120.6 86 62.8
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 7.8e-26 120.6 84 65.5
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 7.8e-26 120.6 86 62.8
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 7.8e-26 120.6 84 65.5
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 7.8e-26 120.6 84 65.5
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 7.8e-26 120.6 84 65.5
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.0e-25 120.2 86 61.6
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.0e-25 120.2 86 62.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.3e-25 119.8 86 64.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.3e-25 119.8 85 64.7
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.3e-25 119.8 86 64.0
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 1.7e-25 119.4 86 64.0
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.7e-25 119.4 86 65.1
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.7e-25 119.4 86 65.1
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 3.0e-25 118.6 86 61.6
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 3.9e-25 118.2 86 61.6
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 5.1e-25 117.9 84 64.3
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 8.6e-25 117.1 86 62.8
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 8.6e-25 117.1 86 61.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 3.3e-24 115.2 84 64.3
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.6e-23 112.8 99 54.5
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.8e-23 112.1 73 68.5
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 3.6e-23 111.7 74 71.6
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 3.6e-23 111.7 91 61.5
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 4.7e-23 111.3 74 73.0
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 4.7e-23 111.3 86 60.5
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.1e-22 110.2 75 68.0
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.1e-22 110.2 76 67.1
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.1e-22 110.2 112 51.8
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 1.1e-22 110.2 76 67.1
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.8e-22 109.4 74 67.6
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 4.0e-22 108.2 74 67.6
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 5.2e-22 107.8 75 68.0
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.6e-21 105.5 74 67.6
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.6e-21 105.5 74 67.6
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.7e-20 102.8 94 56.4
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 2.2e-20 102.4 85 61.2
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 7.8e-18 94.0 81 54.3
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.3e-16 88.2 65 60.0
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 4.7e-15 84.7 41 90.2
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.4e-14 83.2 44 84.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.4e-14 82.4 39 92.3
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 1.5e-13 79.7 41 85.4
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 5.8e-13 77.8 51 62.7
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.3e-12 76.6 86 47.7
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.4e-11 73.2 73 49.3
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.9e-11 72.8 83 47.0
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 9.3e-11 70.5 83 45.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 2.1e-10 69.3 86 44.2
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 3.5e-10 68.6 52 57.7


User provided reference genes

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