Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO198G0079 Selaginella moellendorffii HOM05D001478 ORTHO05D373731 1.9e-115 419.5 259 100.0
RcHm_v2.0_Chr5g0073821 Rosa chinensis HOM05D001478 ORTHO05D002240 7.5e-11 72.0 256 27.0
AL4G25410 Arabidopsis lyrata HOM05D001478 ORTHO05D002240 1.3e-10 71.2 248 24.6
CiPaw.14G048800 Carya illinoinensis HOM05D001478 ORTHO05D002240 1.7e-10 70.9 267 27.7
Migut.D00801 Erythranthe guttata HOM05D001478 ORTHO05D002240 1.7e-10 70.9 274 25.9
Cc01_g15500 Coffea canephora HOM05D001478 ORTHO05D002240 2.2e-10 70.5 271 26.6
FvH4_3g41090 Fragaria vesca HOM05D001478 ORTHO05D002240 2.8e-10 70.1 256 26.2
FAN16G0166 Fragaria x ananassa HOM05D001478 ORTHO05D002240 3.7e-10 69.7 256 26.2
MSTRG.21269 Avicennia marina HOM05D001478 ORTHO05D002240 4.9e-10 69.3 269 26.0
FAN21G1420 Fragaria x ananassa HOM05D001478 ORTHO05D002240 4.9e-10 69.3 255 25.9
Sp4g13080 Schrenkiella parvula HOM05D001478 ORTHO05D002240 6.3e-10 68.9 248 23.8
Aqoxy4G03312 Aquilegia oxysepala HOM05D001478 ORTHO05D002240 8.3e-10 68.6 261 25.3
Aa31LG5G6240 Aethionema arabicum HOM05D001478 ORTHO05D002240 1.1e-09 68.2 253 24.5
Carub.0004s1169 Capsella rubella HOM05D001478 ORTHO05D002240 1.4e-09 67.8 248 24.2
AT2G30530 Arabidopsis thaliana HOM05D001478 ORTHO05D002240 2.4e-09 67.0 248 23.8
CSS0048809 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 2.4e-09 67.0 266 24.4
CDE07G0987 Ceratophyllum demersum HOM05D001478 ORTHO05D002240 2.4e-09 67.0 252 24.2
CSS0044389 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 3.2e-09 66.6 266 24.4
Haze_24491 Corylus avellana HOM05D001478 ORTHO05D002240 3.2e-09 66.6 264 26.9
ECA247G1310 Erigeron canadensis HOM05D001478 ORTHO05D000857 3.2e-09 66.6 264 27.7
FAN11G3068 Fragaria x ananassa HOM05D001478 ORTHO05D002240 3.2e-09 66.6 256 25.8
ATR1127G080 Amborella trichopoda HOM05D001478 ORTHO05D002240 7.0e-09 65.5 273 25.3
Cfa011857 Carpinus fangiana HOM05D001478 ORTHO05D002240 1.2e-08 64.7 264 26.1
Nn5g26785 Nelumbo nucifera HOM05D001478 ORTHO05D002240 1.2e-08 64.7 258 25.6
Rhsim01G0244600 Rhododendron simsii HOM05D001478 ORTHO05D002240 1.2e-08 64.7 267 25.5
vmacro14654 Vaccinium macrocarpon HOM05D001478 ORTHO05D002240 1.2e-08 64.7 265 25.3
FAN25G1206 Fragaria x ananassa HOM05D001478 ORTHO05D002240 2.0e-08 63.9 252 25.8
QL01p023736 Quercus lobata HOM05D001478 ORTHO05D002240 2.0e-08 63.9 273 25.6
arahy.Tifrunner.gnm1.ann1.IHW9TM Arachis hypogaea HOM05D001478 ORTHO05D002240 2.7e-08 63.5 220 25.0
arahy.Tifrunner.gnm1.ann1.MV5JUR Arachis hypogaea HOM05D001478 ORTHO05D002240 2.7e-08 63.5 220 25.0
Lalb_Chr20g0117251 Lupinus albus HOM05D001478 ORTHO05D002240 2.7e-08 63.5 269 23.8
PGR102G2620 Punica granatum HOM05D001478 ORTHO05D002240 2.7e-08 63.5 270 26.3
THA.LOC104826259 Tarenaya hassleriana HOM05D001478 ORTHO05D002240 3.5e-08 63.2 259 24.7
Oeu039291.1 Olea europaea HOM05D001478 ORTHO05D002240 4.5e-08 62.8 271 25.1
Sc21g0004820 Simmondsia chinensis HOM05D001478 ORTHO05D002240 4.5e-08 62.8 267 25.1
CDE06G2502 Ceratophyllum demersum HOM05D001478 ORTHO05D002240 5.9e-08 62.4 239 26.8
Dinv28757 Davidia involucrata HOM05D001478 ORTHO05D002240 7.8e-08 62.0 267 25.5
Thhalv10016861m.g Eutrema salsugineum HOM05D001478 ORTHO05D002240 7.8e-08 62.0 248 22.6
Lalb_Chr15g0085631 Lupinus albus HOM05D001478 ORTHO05D002240 7.8e-08 62.0 269 24.5
Medtr3g062850 Medicago truncatula HOM05D001478 ORTHO05D002240 7.8e-08 62.0 272 24.3
CSS0010609 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 1.0e-07 61.6 265 24.9
Ca_15085_v3 Cicer arietinum L. HOM05D001478 ORTHO05D002240 1.0e-07 61.6 270 24.4
HanXRQChr15g0464541 Helianthus annuus HOM05D001478 ORTHO05D002240 1.0e-07 61.6 258 24.8
Os05g0315200 Oryza sativa ssp. japonica HOM05D001478 ORTHO05D002240 1.0e-07 61.6 266 27.1
TPR.G13818 Trifolium pratense HOM05D001478 ORTHO05D002240 1.0e-07 61.6 265 24.9
HPP92_018080 Vanilla planifolia HOM05D001478 ORTHO05D002240 1.0e-07 61.6 270 23.7
Lsat_1_v5_gn_9_15381 Lactuca sativa HOM05D001478 ORTHO05D002240 1.3e-07 61.2 255 23.9
MBI15_g31030_MAGBIO Magnolia biondii HOM05D001478 ORTHO05D002240 1.3e-07 61.2 255 24.7
CiPaw.13G060300 Carya illinoinensis HOM05D001478 ORTHO05D002240 1.7e-07 60.8 283 25.1
Lj6g0003087 Lotus japonicus HOM05D001478 ORTHO05D002240 1.7e-07 60.8 279 24.4
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 2.3e-07 60.5 202 27.7
Ciclev10011688m.g Citrus clementina HOM05D001478 ORTHO05D002240 2.3e-07 60.5 255 25.9
COL.COLO4_11228 Corchorus olitorius HOM05D001478 ORTHO05D002240 2.3e-07 60.5 262 24.8
PGR031G0542 Punica granatum HOM05D001478 ORTHO05D002240 2.3e-07 60.5 257 23.3
SGA_v2.0_scaffold110G31177 Striga asiatica HOM05D000046 ORTHO05D000457 2.9e-07 60.1 206 25.7
Oeu011400.1 Olea europaea HOM05D001478 ORTHO05D002240 3.9e-07 59.7 265 24.9
MSTRG.17933 Avicennia marina HOM05D001478 ORTHO05D002240 5.0e-07 59.3 272 25.0
Glyma.11G200700 Glycine max HOM05D001478 ORTHO05D002240 5.0e-07 59.3 269 22.7
Sc20g0007280 Simmondsia chinensis HOM05D001478 ORTHO05D002240 5.0e-07 59.3 272 23.5
PSO339G3080 Papaver somniferum HOM05D001478 ORTHO05D002240 6.6e-07 58.9 219 25.1
PSO384G1770 Papaver somniferum HOM05D001478 ORTHO05D002240 6.6e-07 58.9 219 25.1
Actinidia23150 Actinidia chinensis HOM05D001478 ORTHO05D002240 1.1e-06 58.2 262 24.4
Peaxi162Scf00455g00139 Petunia axillaris HOM05D001478 ORTHO05D002240 1.1e-06 58.2 271 24.4
GSVIVG01029860001 Vitis vinifera HOM05D001478 ORTHO05D002240 1.1e-06 58.2 268 25.4
SEGI_28951 Sequoiadendron giganteum HOM05D001478 ORTHO05D002240 1.5e-06 57.8 298 24.2
TAR623G0687 Trochodendron aralioides HOM05D001478 ORTHO05D002240 1.5e-06 57.8 261 23.4
MD11G1050100 Malus domestica HOM05D001478 ORTHO05D002240 1.9e-06 57.4 253 24.9
Psat5g145760 Pisum sativum HOM05D001478 ORTHO05D002240 1.9e-06 57.4 271 25.1
Dinv25370 Davidia involucrata HOM05D001478 ORTHO05D002240 2.5e-06 57.0 273 23.4
Pp3c7_3170 Physcomitrium patens HOM05D001478 ORTHO05D002240 2.5e-06 57.0 219 24.7
Glyma.18G050100 Glycine max HOM05D001478 ORTHO05D002240 4.3e-06 56.2 263 22.4
Zm00001eb350740 Zea mays HOM05D001478 ORTHO05D002240 4.3e-06 56.2 259 24.7
Cpa.g.sc2.265 Carica papaya HOM05D001478 ORTHO05D002240 5.6e-06 55.8 262 24.4
Dinv12293 Davidia involucrata HOM05D001478 ORTHO05D002240 5.6e-06 55.8 266 24.8
Lalb_Chr18g0054051 Lupinus albus HOM05D001478 ORTHO05D002240 5.6e-06 55.8 263 21.7
Sopen09g018440 Solanum pennellii HOM05D001478 ORTHO05D002240 5.6e-06 55.8 278 24.1
MSTRG.18926 Avicennia marina HOM05D001478 ORTHO05D002240 7.3e-06 55.5 255 23.9
CAN.G369.6 Capsicum annuum HOM05D001478 ORTHO05D002240 7.3e-06 55.5 268 23.9
HanXRQChr10g0286191 Helianthus annuus HOM05D001478 ORTHO05D002240 7.3e-06 55.5 254 24.8
Potri.019G132300 Populus trichocarpa HOM05D001478 ORTHO05D002240 7.3e-06 55.5 282 22.7
Solyc09g055590.3 Solanum lycopersicum HOM05D001478 ORTHO05D002240 7.3e-06 55.5 278 23.0
CSS0001206 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 9.5e-06 55.1 210 25.7
Duzib212G0118 Durio zibethinus HOM05D001478 ORTHO05D002240 9.5e-06 55.1 274 25.5
FvH4_6g09370 Fragaria vesca HOM05D001478 ORTHO05D002240 9.5e-06 55.1 195 24.1
FAN02G0196 Fragaria x ananassa HOM05D001478 ORTHO05D002240 9.5e-06 55.1 195 24.1
FAN14G0581 Fragaria x ananassa HOM05D001478 ORTHO05D002240 9.5e-06 55.1 195 24.1
Manes.18G124700 Manihot esculenta HOM05D001478 ORTHO05D002240 9.5e-06 55.1 262 23.7
Medtr7g074150 Medicago truncatula HOM05D001478 ORTHO05D002240 9.5e-06 55.1 200 25.0
THA.LOC104806656 Tarenaya hassleriana HOM05D001478 ORTHO05D002240 9.5e-06 55.1 264 24.6
Thecc.04G146500 Theobroma cacao HOM05D001478 ORTHO05D002240 9.5e-06 55.1 274 25.2


User provided reference genes

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