Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 4.3e-104 381.3 192 100.0
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 2.5e-64 249.2 191 60.2
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 2.9e-60 235.7 191 59.7
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 1.1e-56 223.8 190 54.7
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 3.7e-55 218.8 191 53.9
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 8.2e-55 217.6 191 53.9
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 1.1e-54 217.2 191 53.9
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 1.1e-54 217.2 191 53.9
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 1.4e-54 216.9 191 53.9
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 1.8e-54 216.5 191 53.4
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 2.4e-54 216.1 191 53.4
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 4.1e-54 215.3 191 52.4
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 6.9e-54 214.5 191 52.4
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 6.9e-54 214.5 191 53.4
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 6.9e-54 214.5 191 53.9
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 6.9e-54 214.5 190 54.7
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 9.1e-54 214.2 191 52.9
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 9.1e-54 214.2 191 52.4
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.5e-53 213.4 191 52.4
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.5e-53 213.4 191 52.4
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.5e-53 213.4 191 52.4
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 1.5e-53 213.4 191 53.4
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 2.0e-53 213.0 191 53.4
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 2.0e-53 213.0 191 52.9
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 2.6e-53 212.6 191 52.4
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 3.4e-53 212.2 191 53.4
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 4.5e-53 211.8 191 50.3
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 4.5e-53 211.8 191 52.4
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 4.5e-53 211.8 191 53.9
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 5.9e-53 211.5 191 52.9
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 7.7e-53 211.1 191 52.4
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 7.7e-53 211.1 191 52.4
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 1.0e-52 210.7 191 52.9
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 1.0e-52 210.7 190 53.2
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.7e-52 209.9 190 53.2
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 1.7e-52 209.9 191 50.3
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 2.9e-52 209.1 191 51.3
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 2.9e-52 209.1 191 51.3
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 3.8e-52 208.8 191 50.8
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 5.0e-52 208.4 190 53.7
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 6.5e-52 208.0 192 53.1
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 6.5e-52 208.0 191 51.3
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 6.5e-52 208.0 191 51.8
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 8.5e-52 207.6 190 52.1
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 8.5e-52 207.6 191 53.4
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 8.5e-52 207.6 192 52.6
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.1e-51 207.2 191 51.3
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 1.1e-51 207.2 191 52.9
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 1.1e-51 207.2 190 51.6
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 1.1e-51 207.2 191 50.8
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 1.4e-51 206.8 191 51.8
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 1.4e-51 206.8 191 51.8
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 1.9e-51 206.5 191 52.9
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 1.9e-51 206.5 192 52.6
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 1.9e-51 206.5 192 52.6
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 1.9e-51 206.5 192 52.6
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 2.5e-51 206.1 191 52.4
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 2.5e-51 206.1 191 52.9
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 2.5e-51 206.1 206 50.0
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 3.2e-51 205.7 191 52.4
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 3.2e-51 205.7 191 49.2
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 3.2e-51 205.7 191 51.8
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 3.2e-51 205.7 191 52.4
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 4.2e-51 205.3 191 52.4
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 5.5e-51 204.9 191 52.4
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 5.5e-51 204.9 191 51.8
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 5.5e-51 204.9 191 51.3
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 5.5e-51 204.9 191 50.8
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 7.2e-51 204.5 191 50.8
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 1.2e-50 203.8 191 49.7
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 2.1e-50 203.0 191 50.3
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 4.7e-50 201.8 191 49.2
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 6.1e-50 201.4 215 47.0
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.0e-49 200.7 191 49.7
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 1.8e-49 199.9 191 49.2
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 3.0e-49 199.1 191 50.3
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 3.9e-49 198.7 191 49.2
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 8.8e-49 197.6 191 47.6
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.5e-48 196.8 198 49.5
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 2.6e-48 196.1 207 47.3
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 2.6e-48 196.1 207 47.3
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 2.6e-48 196.1 190 49.5
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 5.7e-48 194.9 191 47.1
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 5.7e-48 194.9 191 47.6
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 7.4e-48 194.5 200 48.5
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 7.4e-48 194.5 191 50.8
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 9.7e-48 194.1 191 48.7
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 1.7e-47 193.4 195 48.7
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 2.2e-47 193.0 190 48.4
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.4e-46 189.5 166 53.6
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 7.7e-45 184.5 189 47.6
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 2.2e-44 183.0 191 47.6
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.1e-43 180.6 216 42.1
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 1.9e-43 179.9 168 52.4
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 4.2e-43 178.7 216 42.1
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 1.0e-41 174.1 191 45.5
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.5e-40 170.2 161 49.7
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 4.2e-35 152.1 189 40.7
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 4.2e-35 152.1 163 47.2
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 2.2e-31 139.8 143 46.9
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 6.5e-28 128.3 140 44.3
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 1.1e-27 127.5 135 43.7
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 1.9e-27 126.7 143 41.3
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.8e-25 120.2 135 41.5
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 5.7e-24 115.2 118 47.5
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 5.7e-24 115.2 131 46.6
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 1.1e-22 110.9 118 44.1
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 8.6e-20 101.3 147 37.4
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 2.8e-18 96.3 68 63.2
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 6.8e-17 91.7 60 66.7
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 5.9e-13 78.6 48 72.9
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.3e-12 76.6 48 70.8
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 2.8e-10 69.7 206 28.2
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 1.7e-07 60.5 81 35.8
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 4.1e-06 55.8 79 36.7
SMO236G0018 Selaginella moellendorffii HOM05D005250 ORTHO05D006342 5.4e-06 55.5 179 24.0


User provided reference genes

Program Settings