Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO196G0256 Selaginella moellendorffii HOM05D005887 ORTHO05D007694 3.1e-84 315.1 158 100.0
SMO234G0067 Selaginella moellendorffii HOM05D005887 ORTHO05D007694 4.8e-61 238.0 157 81.5
ATR0697G253 Amborella trichopoda HOM05D005887 ORTHO05D007694 1.0e-18 97.4 134 47.0
Pp3c19_5280 Physcomitrium patens HOM05D005887 ORTHO05D007694 1.7e-18 96.7 140 44.3
Atru.chr2.1494 Acer truncatum HOM05D005887 ORTHO05D007694 4.7e-16 88.6 114 46.5
Mapoly0088s0062 Marchantia polymorpha HOM05D005887 ORTHO05D007694 4.7e-16 88.6 88 54.5
Nn2g14541 Nelumbo nucifera HOM05D005887 ORTHO05D007694 4.7e-16 88.6 111 45.0
Dinv25053 Davidia involucrata HOM05D005887 ORTHO05D007694 1.4e-15 87.0 137 39.4
GSVIVG01029948001 Vitis vinifera HOM05D005887 ORTHO05D007694 4.0e-15 85.5 122 40.2
Sc07g0007810 Simmondsia chinensis HOM05D005887 ORTHO05D007694 8.9e-15 84.3 104 51.9
Manes.09G137200 Manihot esculenta HOM05D005887 ORTHO05D007694 1.2e-14 84.0 135 36.3
Aqoxy2G00576 Aquilegia oxysepala HOM05D005887 ORTHO05D007694 2.0e-14 83.2 107 45.8
Peaxi162Scf00575g00211 Petunia axillaris HOM05D005887 ORTHO05D007694 2.0e-14 83.2 130 42.3
Pp3c21_2290 Physcomitrium patens HOM05D005887 ORTHO05D007694 2.0e-14 83.2 47 76.6
PGR142G3047 Punica granatum HOM05D005887 ORTHO05D007694 3.4e-14 82.4 146 40.4
Dinv05561 Davidia involucrata HOM05D005887 ORTHO05D007694 4.4e-14 82.0 126 42.1
SEGI_23070 Sequoiadendron giganteum HOM05D005887 ORTHO05D007694 4.4e-14 82.0 97 46.4
Glyma.16G037100 Glycine max HOM05D005887 ORTHO05D007694 5.8e-14 81.6 70 54.3
Phvul.001G115400 Phaseolus vulgaris HOM05D005887 ORTHO05D007694 5.8e-14 81.6 101 46.5
CiPaw.09G168200 Carya illinoinensis HOM05D005887 ORTHO05D007694 7.5e-14 81.3 116 42.2
TWI32G0189 Tripterygium wilfordii HOM05D005887 ORTHO05D007694 7.5e-14 81.3 135 38.5
Migut.J01533 Erythranthe guttata HOM05D005887 ORTHO05D007694 9.8e-14 80.9 120 41.7
Lalb_Chr14g0364771 Lupinus albus HOM05D005887 ORTHO05D007694 9.8e-14 80.9 70 52.9
MD12G1009600 Malus domestica HOM05D005887 ORTHO05D007694 9.8e-14 80.9 129 40.3
VMungo1383G0364 Vigna mungo HOM05D005887 ORTHO05D007694 9.8e-14 80.9 94 46.8
Duzib177G0756 Durio zibethinus HOM05D005887 ORTHO05D007694 1.3e-13 80.5 64 57.8
SalBow6G3467 Salvia bowleyana HOM05D005887 ORTHO05D007694 1.3e-13 80.5 77 53.2
SalBow6G6179 Salvia bowleyana HOM05D005887 ORTHO05D007694 1.3e-13 80.5 77 53.2
Actinidia03929 Actinidia chinensis HOM05D005887 ORTHO05D007694 1.7e-13 80.1 132 37.1
AUR62038443 Chenopodium quinoa HOM05D005887 ORTHO05D007694 1.7e-13 80.1 145 37.2
Potri.013G064700 Populus trichocarpa HOM05D005887 ORTHO05D007694 1.7e-13 80.1 99 49.5
TAR623G1725 Trochodendron aralioides HOM05D005887 ORTHO05D007694 1.7e-13 80.1 115 40.0
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 2.9e-13 79.3 43 74.4
arahy.Tifrunner.gnm1.ann1.AI33FF Arachis hypogaea HOM05D005887 ORTHO05D007694 2.9e-13 79.3 69 52.2
MSTRG.19728 Avicennia marina HOM05D005887 ORTHO05D007694 2.9e-13 79.3 111 40.5
MBI11_g23645_MAGBIO Magnolia biondii HOM05D005887 ORTHO05D007694 2.9e-13 79.3 127 42.5
Prupe.7G011600 Prunus persica HOM05D005887 ORTHO05D007694 2.9e-13 79.3 134 34.3
arahy.Tifrunner.gnm1.ann1.4AIN5Y Arachis hypogaea HOM05D005887 ORTHO05D007694 3.7e-13 79.0 73 53.4
CANSAT78G0414 Cannabis sativa HOM05D005887 ORTHO05D007694 3.7e-13 79.0 64 57.8
Ca_08305_v3 Cicer arietinum L. HOM05D005887 ORTHO05D007694 3.7e-13 79.0 109 41.3
Glyma.19G116000 Glycine max HOM05D005887 ORTHO05D007694 3.7e-13 79.0 71 53.5
Lj4A924T26 Lonicera japonica HOM05D005887 ORTHO05D007694 3.7e-13 79.0 43 74.4
Cfa017707 Carpinus fangiana HOM05D005887 ORTHO05D007694 4.9e-13 78.6 73 53.4
Ciclev10019476m.g Citrus clementina HOM05D005887 ORTHO05D007694 4.9e-13 78.6 74 52.7
CsaV3_4G012000 Cucumis sativus L. HOM05D005887 ORTHO05D007694 4.9e-13 78.6 135 40.0
Sabra13G0056600 Salix brachista HOM05D005887 ORTHO05D007694 4.9e-13 78.6 106 46.2
Carub.0007s3113 Capsella rubella HOM05D005887 ORTHO05D007694 6.4e-13 78.2 127 40.2
Cpa.g.sc161.27 Carica papaya HOM05D005887 ORTHO05D007694 6.4e-13 78.2 95 46.3
AUR62036255 Chenopodium quinoa HOM05D005887 ORTHO05D007694 6.4e-13 78.2 131 37.4
Cc06_g17180 Coffea canephora HOM05D005887 ORTHO05D007694 6.4e-13 78.2 72 51.4
Lj1g0025826 Lotus japonicus HOM05D005887 ORTHO05D007694 6.4e-13 78.2 95 46.3
A05p16500 Brassica napus HOM05D005887 ORTHO05D007694 8.3e-13 77.8 80 50.0
BraA05t20555Z Brassica rapa HOM05D005887 ORTHO05D007694 8.3e-13 77.8 80 50.0
DCAR_013485 Daucus carota HOM05D005887 ORTHO05D007694 8.3e-13 77.8 100 49.0
Gohir.A11G230900 Gossypium hirsutum HOM05D005887 ORTHO05D007694 8.3e-13 77.8 130 41.5
Hund15123 Selenicereus undatus HOM05D005887 ORTHO05D007694 8.3e-13 77.8 88 47.7
BcaC08g44312 Brassica carinata HOM05D005887 ORTHO05D007694 1.1e-12 77.4 87 47.1
C06p17350 Brassica napus HOM05D005887 ORTHO05D007694 1.1e-12 77.4 87 47.1
BolC6t36931H Brassica oleracea HOM05D005887 ORTHO05D007694 1.1e-12 77.4 87 47.1
MELO3C008847.2 Cucumis melo HOM05D005887 ORTHO05D007694 1.1e-12 77.4 135 39.3
Lsat_1_v5_gn_6_31540 Lactuca sativa HOM05D005887 ORTHO05D007694 1.1e-12 77.4 63 55.6
Pp3c18_19520 Physcomitrium patens HOM05D005887 ORTHO05D007694 1.1e-12 77.4 44 75.0
BcaB02g08052 Brassica carinata HOM05D005887 ORTHO05D007694 1.4e-12 77.0 119 42.9
CSS0043599 Camellia sinensis var. sinensis HOM05D005887 ORTHO05D007694 1.4e-12 77.0 140 38.6
CARHR217310 Cardamine hirsuta HOM05D005887 ORTHO05D007694 1.4e-12 77.0 121 39.7
Sp7g07090 Schrenkiella parvula HOM05D005887 ORTHO05D007694 1.4e-12 77.0 64 54.7
CDE05G2124 Ceratophyllum demersum HOM05D005887 ORTHO05D007694 1.9e-12 76.6 107 41.1
FvH4_1g28520 Fragaria vesca HOM05D005887 ORTHO05D007694 1.9e-12 76.6 67 56.7
Gohir.D11G242200 Gossypium hirsutum HOM05D005887 ORTHO05D007694 2.4e-12 76.3 104 47.1
Gorai.007G256500 Gossypium raimondii HOM05D005887 ORTHO05D007694 2.4e-12 76.3 104 47.1
Lj1g0022988 Lotus japonicus HOM05D005887 ORTHO05D007694 3.2e-12 75.9 105 41.9
Sed0023418 Sechium edule HOM05D005887 ORTHO05D007694 3.2e-12 75.9 133 38.3
AT5G35220 Arabidopsis thaliana HOM05D005887 ORTHO05D007694 4.1e-12 75.5 117 40.2
HPP92_012147 Vanilla planifolia HOM05D005887 ORTHO05D007694 4.1e-12 75.5 93 43.0
CBR_g29290 Chara braunii HOM05D005887 ORTHO05D007694 5.4e-12 75.1 86 50.0
Haze_20429 Corylus avellana HOM05D005887 ORTHO05D007694 5.4e-12 75.1 132 36.4
MD14G1007000 Malus domestica HOM05D005887 ORTHO05D007694 5.4e-12 75.1 73 49.3
Medtr7g086430 Medicago truncatula HOM05D005887 ORTHO05D007694 7.1e-12 74.7 95 45.3
EL10Ac5g11724 Beta vulgaris HOM05D005887 ORTHO05D007694 9.2e-12 74.3 58 55.2
CAN.G128.144 Capsicum annuum HOM05D005887 ORTHO05D007694 9.2e-12 74.3 82 45.1
Eucgr.K01523 Eucalyptus grandis HOM05D005887 ORTHO05D007694 9.2e-12 74.3 74 48.6
HanXRQChr14g0454101 Helianthus annuus HOM05D005887 ORTHO05D007694 9.2e-12 74.3 96 44.8
Thecc.05G243300 Theobroma cacao HOM05D005887 ORTHO05D007694 9.2e-12 74.3 126 38.1
ClCG04G004540 Citrullus lanatus HOM05D005887 ORTHO05D007694 1.2e-11 73.9 156 36.5
Nitab4.5_0000387g0010 Nicotiana tabacum HOM05D005887 ORTHO05D007694 1.2e-11 73.9 82 47.6
PGSC0003DMG400028216 Solanum tuberosum HOM05D005887 ORTHO05D007694 1.2e-11 73.9 97 42.3
vmacro07662 Vaccinium macrocarpon HOM05D005887 ORTHO05D007694 1.2e-11 73.9 145 41.4
CDE02G2374 Ceratophyllum demersum HOM05D005887 ORTHO05D007694 1.6e-11 73.6 107 40.2
Psat3g087360 Pisum sativum HOM05D005887 ORTHO05D007694 1.6e-11 73.6 89 44.9
Rhsim03G0050300 Rhododendron simsii HOM05D005887 ORTHO05D007694 1.6e-11 73.6 100 44.0
THA.LOC104823776 Tarenaya hassleriana HOM05D005887 ORTHO05D007694 1.6e-11 73.6 115 38.3
ECA233G0274 Erigeron canadensis HOM05D005887 ORTHO05D007694 2.1e-11 73.2 97 46.4
HanXRQChr13g0398941 Helianthus annuus HOM05D005887 ORTHO05D007694 2.1e-11 73.2 113 42.5
AagrBONN_evm.TU.Sc2ySwM_228.5240 Anthoceros agrestis HOM05D005887 ORTHO05D007694 3.5e-11 72.4 142 37.3
PSO339G4097 Papaver somniferum HOM05D005887 ORTHO05D007694 3.5e-11 72.4 43 67.4
Thhalv10003446m.g Eutrema salsugineum HOM05D005887 ORTHO05D007694 4.6e-11 72.0 135 34.1
PSO384G1854 Papaver somniferum HOM05D005887 ORTHO05D007694 7.8e-11 71.2 43 65.1
SGA_v2.0_scaffold66G22381 Striga asiatica HOM05D005887 ORTHO05D007694 7.8e-11 71.2 119 37.0
Zm00001eb060350 Zea mays HOM05D005887 ORTHO05D007694 7.8e-11 71.2 144 35.4
Aa31LG9G14060 Aethionema arabicum HOM05D005887 ORTHO05D007694 1.0e-10 70.9 80 47.5
Sopen10g031970 Solanum pennellii HOM05D005887 ORTHO05D007694 1.0e-10 70.9 97 40.2
AL7G44120 Arabidopsis lyrata HOM05D005887 ORTHO05D007694 1.3e-10 70.5 36 80.6
Solyc10g081470.2 Solanum lycopersicum HOM05D005887 ORTHO05D007694 1.3e-10 70.5 101 40.6
TPR.G17873 Trifolium pratense HOM05D005887 ORTHO05D007694 3.0e-10 69.3 102 42.2
FAN19G2652 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.9e-10 68.9 36 77.8
FAN23G2292 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.9e-10 68.9 36 77.8
FAN26G0029 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.9e-10 68.9 36 77.8
FAN28G1866 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.9e-10 68.9 36 77.8
RcHm_v2.0_Chr3g0496231 Rosa chinensis HOM05D005887 ORTHO05D007694 8.6e-10 67.8 93 41.9
Os03g0792400 Oryza sativa ssp. japonica HOM05D005887 ORTHO05D007694 1.5e-09 67.0 60 50.0
Zm00001eb213150 Zea mays HOM05D005887 ORTHO05D007694 1.5e-09 67.0 60 50.0
Oeu052792.1 Olea europaea HOM05D005887 ORTHO05D007694 1.2e-08 63.9 36 72.2
Oeu052794.1 Olea europaea HOM05D005887 ORTHO05D007694 1.2e-08 63.9 36 72.2
Aqoxy2G00460 Aquilegia oxysepala HOM05D005887 ORTHO05D007694 2.0e-06 56.6 29 75.9


User provided reference genes

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