Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.5e-119 433.0 228 100.0
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.6e-44 183.7 178 53.4
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 2.1e-41 173.3 176 50.0
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.1e-41 173.3 172 49.4
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 2.7e-41 172.9 188 47.3
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 6.1e-41 171.8 177 48.6
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 6.1e-41 171.8 172 48.3
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 6.1e-41 171.8 182 49.5
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 8.0e-41 171.4 173 50.3
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.3e-40 169.9 175 50.3
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.3e-40 169.9 175 50.3
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 2.3e-40 169.9 175 50.3
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.3e-40 169.9 183 47.0
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.3e-40 169.9 183 47.0
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 3.0e-40 169.5 177 49.7
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 3.0e-40 169.5 203 45.8
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 3.0e-40 169.5 176 50.0
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 4.0e-40 169.1 175 49.7
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 4.0e-40 169.1 173 49.1
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 4.0e-40 169.1 173 49.1
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 4.0e-40 169.1 173 49.1
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 5.2e-40 168.7 178 48.9
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 5.2e-40 168.7 179 48.0
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 6.8e-40 168.3 172 48.8
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 6.8e-40 168.3 172 48.8
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 6.8e-40 168.3 172 48.8
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 6.8e-40 168.3 178 48.9
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 6.8e-40 168.3 178 49.4
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 8.8e-40 167.9 180 47.8
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 8.8e-40 167.9 175 52.0
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 8.8e-40 167.9 175 49.7
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 8.8e-40 167.9 175 50.9
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.2e-39 167.5 176 48.9
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.2e-39 167.5 175 51.4
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.5e-39 167.2 172 50.0
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.5e-39 167.2 179 47.5
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.5e-39 167.2 175 48.0
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.5e-39 167.2 176 49.4
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 2.0e-39 166.8 172 47.7
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 2.0e-39 166.8 175 49.7
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.0e-39 166.8 176 49.4
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 2.0e-39 166.8 175 50.3
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 2.0e-39 166.8 176 48.3
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 2.0e-39 166.8 181 49.7
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 2.6e-39 166.4 178 48.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 2.6e-39 166.4 179 47.5
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 2.6e-39 166.4 192 45.8
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 3.4e-39 166.0 179 47.5
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.4e-39 166.0 175 50.3
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 3.4e-39 166.0 180 47.2
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 3.4e-39 166.0 180 47.2
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.4e-39 165.6 178 48.3
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 4.4e-39 165.6 178 48.9
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 4.4e-39 165.6 180 47.2
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 9.8e-39 164.5 179 48.6
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 9.8e-39 164.5 190 46.3
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 9.8e-39 164.5 177 46.9
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 9.8e-39 164.5 181 49.2
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 9.8e-39 164.5 181 49.2
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 9.8e-39 164.5 181 49.2
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 9.8e-39 164.5 167 50.3
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-38 164.1 181 49.2
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.3e-38 164.1 176 50.0
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 1.3e-38 164.1 181 47.5
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.7e-38 163.7 172 47.7
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.7e-38 163.7 184 46.7
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.7e-38 163.7 184 46.7
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.7e-38 163.7 184 46.7
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.7e-38 163.7 181 48.6
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.7e-38 163.7 188 46.3
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.2e-38 163.3 181 48.6
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 2.2e-38 163.3 181 48.6
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.2e-38 163.3 181 49.2
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 2.2e-38 163.3 176 48.3
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 2.8e-38 162.9 188 46.3
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 2.8e-38 162.9 175 48.0
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 2.8e-38 162.9 174 47.7
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 2.8e-38 162.9 176 47.7
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 3.7e-38 162.5 185 45.9
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 3.7e-38 162.5 187 46.0
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 3.7e-38 162.5 187 46.0
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 4.9e-38 162.2 219 42.0
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 4.9e-38 162.2 175 46.9
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 6.3e-38 161.8 184 46.2
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 6.3e-38 161.8 187 44.9
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.1e-37 159.5 176 47.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 3.1e-37 159.5 175 47.4
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 4.1e-37 159.1 175 47.4
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 4.1e-37 159.1 173 50.9
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 5.4e-37 158.7 178 45.5
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 2.0e-36 156.8 172 49.4
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 7.7e-36 154.8 181 46.4
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 7.7e-36 154.8 180 46.7
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 7.7e-36 154.8 199 44.2
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.3e-35 154.1 170 44.1
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 3.8e-35 152.5 170 47.1
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 1.9e-34 150.2 171 46.2
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 9.5e-34 147.9 143 47.6
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.8e-33 146.4 139 51.8
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 3.0e-32 142.9 146 49.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 2.0e-31 140.2 153 45.8
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 5.7e-31 138.7 175 45.7
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 2.0e-28 130.2 172 42.4
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 2.7e-28 129.8 144 47.9
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.2e-21 104.8 170 35.3
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.6e-20 104.0 104 51.9
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 6.0e-20 102.1 119 49.6
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.3e-19 100.9 103 51.5
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 8.9e-16 88.2 97 49.5
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 2.7e-12 76.6 69 53.6
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.5e-10 70.9 168 28.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 5.2e-08 62.4 131 33.6


User provided reference genes

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