Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO195G0045 Selaginella moellendorffii HOM05D002775 ORTHO05D018289 2.5e-107 392.1 196 100.0
Mapoly0054s0014 Marchantia polymorpha HOM05D002775 ORTHO05D018289 1.8e-65 253.1 190 61.6
Pp3c21_10890 Physcomitrium patens HOM05D002775 ORTHO05D018289 6.4e-63 244.6 188 63.3
AagrBONN_evm.TU.Sc2ySwM_344.4303 Anthoceros agrestis HOM05D002775 ORTHO05D018289 3.5e-61 238.8 190 60.0
ATR1127G056 Amborella trichopoda HOM05D002775 ORTHO05D018289 1.2e-58 230.3 190 59.5
SEGI_19562 Sequoiadendron giganteum HOM05D002775 ORTHO05D018289 4.0e-57 225.3 189 57.7
PRCOL_00002270 Prasinoderma coloniale HOM05D002775 ORTHO05D018289 2.5e-19 99.8 202 33.2
Zm00001eb017260 Zea mays HOM05D002775 ORTHO05D003262 6.9e-09 65.1 188 27.7
TWI74G0453 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 1.2e-08 64.3 82 39.0
CARHR136340 Cardamine hirsuta HOM05D002775 ORTHO05D003262 1.5e-08 63.9 150 27.3
THA.LOC104816223 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 2.0e-08 63.5 82 39.0
BcaC02g12889 Brassica carinata HOM05D002775 ORTHO05D003262 3.4e-08 62.8 82 37.8
Lsat_1_v5_gn_9_29601 Lactuca sativa HOM05D002775 ORTHO05D003262 3.4e-08 62.8 151 27.8
THA.LOC104824403 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 3.4e-08 62.8 82 39.0
CANSAT64G2189 Cannabis sativa HOM05D002775 ORTHO05D003262 4.5e-08 62.4 82 39.0
Carub.0004s2357 Capsella rubella HOM05D002775 ORTHO05D003262 5.9e-08 62.0 82 36.6
Thhalv10016879m.g Eutrema salsugineum HOM05D002775 ORTHO05D003262 5.9e-08 62.0 82 36.6
SalBow6G1070 Salvia bowleyana HOM05D002775 ORTHO05D003262 5.9e-08 62.0 82 40.2
A04p31450 Brassica napus HOM05D002775 ORTHO05D003262 7.7e-08 61.6 82 36.6
C04p68860 Brassica napus HOM05D002775 ORTHO05D003262 7.7e-08 61.6 82 36.6
BraA04t18602Z Brassica rapa HOM05D002775 ORTHO05D003262 7.7e-08 61.6 82 36.6
Oeu008217.1 Olea europaea HOM05D002775 ORTHO05D003262 7.7e-08 61.6 151 28.5
MSTRG.6374 Avicennia marina HOM05D002775 ORTHO05D003262 1.0e-07 61.2 82 40.2
BolC4t28390H Brassica oleracea HOM05D002775 ORTHO05D003262 1.0e-07 61.2 82 36.6
Cfa020016 Carpinus fangiana HOM05D002775 ORTHO05D003262 1.0e-07 61.2 151 27.2
Ca_08411_v3 Cicer arietinum L. HOM05D002775 ORTHO05D003262 1.0e-07 61.2 82 37.8
MD14G1085300 Malus domestica HOM05D002775 ORTHO05D003262 1.0e-07 61.2 82 40.2
Ah.13g076910 Amaranthus hybridus HOM05D002775 ORTHO05D003262 1.3e-07 60.8 78 38.5
CiPaw.10G039500 Carya illinoinensis HOM05D002775 ORTHO05D003262 1.3e-07 60.8 82 39.0
Lj1g0020632 Lotus japonicus HOM05D002775 ORTHO05D003262 1.3e-07 60.8 82 39.0
Oeu059333.1 Olea europaea HOM05D002775 ORTHO05D003262 1.3e-07 60.8 82 40.2
Prupe.7G041200 Prunus persica HOM05D002775 ORTHO05D003262 1.3e-07 60.8 82 39.0
RcHm_v2.0_Chr2g0125431 Rosa chinensis HOM05D002775 ORTHO05D003262 1.3e-07 60.8 82 37.8
SGA_v2.0_scaffold105G30299 Striga asiatica HOM05D000302 ORTHO05D000334 1.3e-07 60.8 154 29.2
TWI77G0151 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 1.3e-07 60.8 82 37.8
ATR0745G031 Amborella trichopoda HOM05D002775 ORTHO05D003262 1.7e-07 60.5 76 42.1
Aqoxy1G00357 Aquilegia oxysepala HOM05D002775 ORTHO05D003262 1.7e-07 60.5 82 37.8
CiPaw.09G046700 Carya illinoinensis HOM05D002775 ORTHO05D003262 1.7e-07 60.5 82 36.6
Duzib128G1018 Durio zibethinus HOM05D002775 ORTHO05D003262 1.7e-07 60.5 82 39.0
Hma1.2p1_0553F.1_g177770 Hydrangea macrophylla HOM05D002775 ORTHO05D003262 2.2e-07 60.1 82 37.8
Lj1A1098T77 Lonicera japonica HOM05D002775 ORTHO05D003262 2.2e-07 60.1 151 27.2
PGSC0003DMG400029856 Solanum tuberosum HOM05D002775 ORTHO05D003262 2.2e-07 60.1 150 28.0
Zm00001eb329780 Zea mays HOM05D002775 ORTHO05D003262 2.2e-07 60.1 188 26.1
arahy.Tifrunner.gnm1.ann1.LX9DGM Arachis hypogaea HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 36.6
CSS0046294 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 36.6
CAN.G641.55 Capsicum annuum HOM05D002775 ORTHO05D003262 2.9e-07 59.7 151 27.8
Cc06_g18960 Coffea canephora HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 37.8
DCAR_020560 Daucus carota HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 37.8
Glyma.03G130300 Glycine max HOM05D002775 ORTHO05D003262 2.9e-07 59.7 84 38.1
Nn7g36669 Nelumbo nucifera HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 37.8
Nitab4.5_0000515g0010 Nicotiana tabacum HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 39.0
Sopen10g030260 Solanum pennellii HOM05D002775 ORTHO05D003262 2.9e-07 59.7 150 28.0
Thecc.05G137200 Theobroma cacao HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 39.0
TAR636G1121 Trochodendron aralioides HOM05D002775 ORTHO05D003262 2.9e-07 59.7 82 37.8
arahy.Tifrunner.gnm1.ann1.S2PB51 Arachis hypogaea HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 36.6
AUR62030347 Chenopodium quinoa HOM05D002775 ORTHO05D003262 3.8e-07 59.3 76 40.8
COL.COLO4_20629 Corchorus olitorius HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 39.0
Migut.J01666 Erythranthe guttata HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 37.8
FvH4_6g25490 Fragaria vesca HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 36.6
HanXRQChr10g0292571 Helianthus annuus HOM05D002775 ORTHO05D003262 3.8e-07 59.3 155 27.1
MD12G1093300 Malus domestica HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 39.0
Medtr7g090370 Medicago truncatula HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 37.8
Sp4g23570 Schrenkiella parvula HOM05D002775 ORTHO05D003262 3.8e-07 59.3 82 35.4
Hund24623 Selenicereus undatus HOM05D002775 ORTHO05D003262 3.8e-07 59.3 191 26.2
VMungo1383G3448 Vigna mungo HOM05D002775 ORTHO05D003262 3.8e-07 59.3 84 38.1
EL10Ac3g07198 Beta vulgaris HOM05D002775 ORTHO05D003262 5.0e-07 58.9 82 37.8
CDE05G0954 Ceratophyllum demersum HOM05D002775 ORTHO05D003262 5.0e-07 58.9 82 36.6
Dinv34372 Davidia involucrata HOM05D002775 ORTHO05D003262 5.0e-07 58.9 82 37.8
Rhsim03G0040300 Rhododendron simsii HOM05D002775 ORTHO05D003262 5.0e-07 58.9 82 37.8
vmacro07805 Vaccinium macrocarpon HOM05D002775 ORTHO05D003262 5.0e-07 58.9 82 37.8
Aa31LG3G760 Aethionema arabicum HOM05D002775 ORTHO05D003262 6.5e-07 58.5 82 34.1
Lalb_Chr20g0110181 Lupinus albus HOM05D002775 ORTHO05D003262 6.5e-07 58.5 82 36.6
Nitab4.5_0006876g0030 Nicotiana tabacum HOM05D002775 ORTHO05D003262 6.5e-07 58.5 82 37.8
Hund19104 Selenicereus undatus HOM05D002775 ORTHO05D003262 6.5e-07 58.5 191 25.7
Sc19g0008240 Simmondsia chinensis HOM05D002775 ORTHO05D003262 6.5e-07 58.5 82 37.8
GSVIVG01033613001 Vitis vinifera HOM05D002775 ORTHO05D003262 6.5e-07 58.5 82 39.0
Actinidia09266 Actinidia chinensis HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 36.6
Actinidia17943 Actinidia chinensis HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 36.6
AL4G39230 Arabidopsis lyrata HOM05D002775 ORTHO05D003262 8.5e-07 58.2 151 27.8
AUR62040835 Chenopodium quinoa HOM05D002775 ORTHO05D003262 8.5e-07 58.2 76 40.8
ClCG10G016140 Citrullus lanatus HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 35.4
Dinv09473 Davidia involucrata HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 35.4
Dinv15939 Davidia involucrata HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 35.4
ECA247G0461 Erigeron canadensis HOM05D002775 ORTHO05D003262 8.5e-07 58.2 151 26.5
Manes.08G058400 Manihot esculenta HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 37.8
Os07g0659400 Oryza sativa ssp. japonica HOM05D002775 ORTHO05D003262 8.5e-07 58.2 194 24.2
Sed0003281 Sechium edule HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 36.6
Sed0003461 Sechium edule HOM05D002775 ORTHO05D003262 8.5e-07 58.2 82 36.6
SEGI_04308 Sequoiadendron giganteum HOM05D002775 ORTHO05D003262 8.5e-07 58.2 76 39.5
Gohir.D11G323200 Gossypium hirsutum HOM05D002775 ORTHO05D003262 1.1e-06 57.8 82 36.6
Gorai.007G353200 Gossypium raimondii HOM05D002775 ORTHO05D003262 1.1e-06 57.8 82 36.6
Lalb_Chr25g0286931 Lupinus albus HOM05D002775 ORTHO05D003262 1.1e-06 57.8 82 36.6
Manes.09G006500 Manihot esculenta HOM05D002775 ORTHO05D003262 1.1e-06 57.8 82 36.6
Zm00001eb110760 Zea mays HOM05D002775 ORTHO05D003262 1.1e-06 57.8 76 39.5
Atru.chr1.1504 Acer truncatum HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 35.4
AT2G41250 Arabidopsis thaliana HOM05D002775 ORTHO05D003262 1.4e-06 57.4 78 35.9
MELO3C009765.2 Cucumis melo HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 35.4
Gohir.A11G307800 Gossypium hirsutum HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 36.6
QL03p064981 Quercus lobata HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 35.4
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-06 57.4 82 35.4
QL07p009774 Quercus lobata HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 35.4
QL93p0200_0009 Quercus lobata HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 35.4
QL93p2009_0008 Quercus lobata HOM05D002775 ORTHO05D003262 1.4e-06 57.4 82 35.4
CSS0019588 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 1.9e-06 57.0 82 36.6
Eucgr.A02255 Eucalyptus grandis HOM05D002775 ORTHO05D003262 1.9e-06 57.0 82 37.8
Peaxi162Scf00903g00213 Petunia axillaris HOM05D002775 ORTHO05D003262 1.9e-06 57.0 82 36.6
Phvul.001G126300 Phaseolus vulgaris HOM05D002775 ORTHO05D003262 1.9e-06 57.0 82 37.8
Lj1A1096T60 Lonicera japonica HOM05D002775 ORTHO05D003262 2.5e-06 56.6 76 38.2
PGR031G2172 Punica granatum HOM05D002775 ORTHO05D003262 2.5e-06 56.6 82 36.6
Solyc10g079620.2 Solanum lycopersicum HOM05D002775 ORTHO05D003262 2.5e-06 56.6 187 26.2
Ciclev10005563m.g Citrus clementina HOM05D002775 ORTHO05D003262 3.2e-06 56.2 82 34.1
Haze_20203 Corylus avellana HOM05D002775 ORTHO05D003262 3.2e-06 56.2 82 36.6
HPP92_013974 Vanilla planifolia HOM05D002775 ORTHO05D003262 3.2e-06 56.2 76 38.2
CSS0003680 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 5.5e-06 55.5 82 36.6
CsaV3_3G040280 Cucumis sativus L. HOM05D002775 ORTHO05D003262 5.5e-06 55.5 82 34.1
Sabra16G0039600 Salix brachista HOM05D002775 ORTHO05D003262 5.5e-06 55.5 82 36.6
Sabra16G0044300 Salix brachista HOM05D002775 ORTHO05D003262 5.5e-06 55.5 82 36.6
TPR.G32736 Trifolium pratense HOM05D002775 ORTHO05D003262 5.5e-06 55.5 78 37.2
Phvul.002G004300 Phaseolus vulgaris HOM05D002689 ORTHO05D003129 9.4e-06 54.7 189 24.9
unitig_8.g4554 Utricularia gibba HOM05D002775 ORTHO05D003262 9.4e-06 54.7 76 38.2


User provided reference genes

Program Settings