Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 5.3e-241 837.4 466 100.0
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.2e-234 813.5 517 90.1
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.2e-234 813.5 517 90.1
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 7.7e-123 444.9 383 61.1
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.3e-116 422.2 353 60.9
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 9.1e-116 421.4 366 59.0
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.4e-111 407.5 347 59.1
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 5.7e-110 402.1 375 56.5
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 5.7e-110 402.1 383 56.4
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 7.4e-110 401.7 353 58.4
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 7.4e-110 401.7 347 59.1
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.7e-109 400.6 347 59.1
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 2.2e-109 400.2 358 59.2
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.8e-109 399.8 346 58.4
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 3.7e-109 399.4 364 56.0
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 3.7e-109 399.4 364 57.7
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.8e-109 399.1 373 57.1
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 6.3e-109 398.7 386 53.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.3e-109 398.7 393 53.2
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 6.3e-109 398.7 347 57.9
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 1.1e-108 397.9 375 56.5
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.1e-108 397.9 359 57.4
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.4e-108 397.5 351 58.4
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.4e-108 397.5 349 58.7
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.4e-108 397.5 347 59.1
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.4e-108 396.7 396 52.8
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 3.1e-108 396.4 349 58.7
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.1e-108 396.0 367 56.4
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 9.1e-108 394.8 354 57.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 9.1e-108 394.8 354 57.3
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.2e-107 394.4 375 55.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.6e-107 394.0 373 55.5
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 3.5e-107 392.9 364 56.3
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 4.5e-107 392.5 350 57.7
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 5.9e-107 392.1 347 57.3
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.9e-107 392.1 341 58.7
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 7.7e-107 391.7 365 56.2
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 7.7e-107 391.7 361 56.2
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.0e-106 391.3 391 54.2
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.3e-106 391.0 347 57.6
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.3e-106 391.0 376 55.3
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.3e-106 391.0 346 58.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.7e-106 390.6 346 57.8
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.7e-106 390.6 383 54.3
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.2e-106 390.2 349 57.0
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.9e-106 389.8 376 55.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 3.8e-106 389.4 331 61.0
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 3.8e-106 389.4 358 56.7
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 5.0e-106 389.0 361 56.0
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.1e-105 387.9 361 55.7
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.1e-105 387.9 342 59.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.5e-105 387.5 375 54.4
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.5e-105 387.5 371 54.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.5e-105 387.5 382 55.8
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.9e-105 387.1 351 56.1
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.5e-105 386.7 362 56.6
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 2.5e-105 386.7 345 58.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 2.5e-105 386.7 348 58.6
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 3.2e-105 386.3 384 53.4
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.2e-105 386.3 351 57.5
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 5.5e-105 385.6 375 54.1
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 9.4e-105 384.8 349 57.0
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.7e-104 383.3 347 57.9
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 3.6e-104 382.9 370 55.4
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 3.6e-104 382.9 382 54.7
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 6.7e-103 378.6 396 52.3
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 8.8e-103 378.3 372 54.0
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.5e-102 377.5 388 52.8
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 6.3e-101 372.1 369 56.4
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 6.3e-101 372.1 375 53.6
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 8.0e-96 355.1 384 51.0
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 8.8e-95 351.7 338 55.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 2.6e-94 350.1 349 54.7
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.7e-90 337.4 398 49.0
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.3e-87 327.0 385 48.8
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 2.3e-82 310.5 321 52.3
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 9.2e-76 288.5 300 53.7
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.0e-71 275.0 244 57.0
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 2.3e-71 273.9 284 54.6
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 6.6e-66 255.8 267 52.8
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 7.3e-65 252.3 232 57.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.6e-64 251.1 238 55.5
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 7.3e-57 225.7 335 44.2
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 6.4e-53 212.6 273 46.5
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.8e-47 194.5 149 65.1
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 2.4e-44 184.1 209 48.3
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 3.9e-42 176.8 174 52.3
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.1e-34 149.8 121 57.9
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.3e-32 145.2 118 57.6
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.5e-25 120.9 77 74.0


User provided reference genes

Program Settings