Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 8.0e-70 266.9 131 100.0
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.3e-61 238.8 129 92.2
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 4.9e-59 231.1 127 92.1
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 9.5e-55 216.9 129 83.7
SMO334G0059 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.1e-37 158.7 81 95.1
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.8e-21 106.3 109 45.0
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 5.8e-20 101.3 110 45.5
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 1.0e-19 100.5 108 44.4
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 3.8e-19 98.6 109 43.1
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 3.8e-19 98.6 110 41.8
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 4.9e-19 98.2 106 44.3
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.5e-19 97.8 107 46.7
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.4e-18 96.7 107 42.1
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 1.9e-18 96.3 110 41.8
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 1.9e-18 96.3 103 45.6
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 4.2e-18 95.1 107 42.1
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 4.2e-18 95.1 108 43.5
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 5.5e-18 94.7 112 39.3
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 5.5e-18 94.7 110 41.8
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 5.5e-18 94.7 106 42.5
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 5.5e-18 94.7 110 40.9
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 5.5e-18 94.7 110 41.8
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 9.3e-18 94.0 110 40.0
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 9.3e-18 94.0 115 40.9
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 1.2e-17 93.6 109 43.1
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.6e-17 93.2 104 45.2
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 2.1e-17 92.8 110 43.6
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 2.7e-17 92.4 110 40.0
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 2.7e-17 92.4 110 40.0
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 2.7e-17 92.4 110 40.0
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 3.5e-17 92.0 108 39.8
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.5e-17 92.0 110 40.0
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 4.6e-17 91.7 114 40.4
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 4.6e-17 91.7 109 41.3
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.6e-17 91.7 104 45.2
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 4.6e-17 91.7 110 40.0
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 6.0e-17 91.3 109 40.4
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 6.0e-17 91.3 105 41.0
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 7.9e-17 90.9 110 40.0
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 7.9e-17 90.9 110 39.1
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 7.9e-17 90.9 109 40.4
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 1.0e-16 90.5 110 39.1
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.0e-16 90.5 107 39.3
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.3e-16 90.1 105 41.9
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 1.3e-16 90.1 108 42.6
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.3e-16 90.1 101 46.5
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.8e-16 89.7 103 44.7
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 1.8e-16 89.7 109 41.3
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.8e-16 89.7 104 41.3
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 1.8e-16 89.7 106 43.4
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 1.8e-16 89.7 105 41.9
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.3e-16 89.4 105 41.9
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 2.3e-16 89.4 103 42.7
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 3.0e-16 89.0 110 40.0
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 3.0e-16 89.0 107 39.3
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 3.9e-16 88.6 110 39.1
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 3.9e-16 88.6 110 40.0
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 3.9e-16 88.6 105 42.9
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 5.1e-16 88.2 102 43.1
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 5.1e-16 88.2 109 38.5
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 5.1e-16 88.2 107 38.3
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 6.7e-16 87.8 104 41.3
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 6.7e-16 87.8 103 42.7
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 8.7e-16 87.4 105 41.0
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 8.7e-16 87.4 101 41.6
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 8.7e-16 87.4 107 38.3
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.1e-15 87.0 104 40.4
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 1.1e-15 87.0 105 41.9
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 1.5e-15 86.7 108 36.1
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 1.5e-15 86.7 102 40.2
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.5e-15 86.7 107 37.4
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.5e-15 86.7 110 38.2
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 3.3e-15 85.5 107 40.2
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 4.3e-15 85.1 103 40.8
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 7.4e-15 84.3 108 37.0
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 9.6e-15 84.0 105 40.0
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 2.1e-14 82.8 107 38.3
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 2.1e-14 82.8 103 38.8
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 2.8e-14 82.4 103 39.8
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.8e-14 82.4 134 35.1
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.8e-14 82.4 134 35.1
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 4.8e-14 81.6 103 39.8
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 6.3e-14 81.3 103 39.8
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 6.3e-14 81.3 104 39.4
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.8e-13 79.7 125 35.2
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.8e-13 79.7 108 38.0
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 9.0e-13 77.4 103 38.8
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.0e-12 76.3 100 39.0
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 3.4e-12 75.5 102 39.2
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 3.4e-12 75.5 121 35.5
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 7.6e-12 74.3 103 37.9
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 2.2e-11 72.8 103 35.9
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 7.2e-10 67.8 89 38.2
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.3e-08 63.5 136 29.4
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 5.1e-08 61.6 84 36.9
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.6e-06 56.6 78 37.2


User provided reference genes

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