Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO181G0022 Selaginella moellendorffii HOM05D004940 ORTHO05D037547 0.0e+00 1537.7 794 100.0
SMO181G0004 Selaginella moellendorffii HOM05D004940 ORTHO05D037547 5.6e-190 668.7 461 84.4
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 1.1e-110 405.2 321 69.2
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 4.7e-64 250.4 340 42.4
SMO137G0268 Selaginella moellendorffii HOM05D004810 ORTHO05D006272 6.8e-63 246.5 194 70.6
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 1.9e-60 238.4 326 43.3
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 4.0e-55 220.7 323 40.6
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 4.4e-54 217.2 341 37.0
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 9.9e-54 216.1 343 37.9
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 8.3e-53 213.0 340 38.5
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 1.1e-52 212.6 343 38.2
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 1.4e-52 212.2 343 38.2
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 3.2e-52 211.1 343 37.6
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 3.2e-52 211.1 340 38.2
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 4.1e-52 210.7 346 35.3
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 4.1e-52 210.7 340 39.1
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 5.4e-52 210.3 388 35.8
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 1.2e-51 209.1 342 38.0
COL.COLO4_36581 Corchorus olitorius HOM05D004940 ORTHO05D007805 3.5e-51 207.6 340 38.2
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 3.5e-51 207.6 343 37.6
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 4.6e-51 207.2 342 36.5
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 4.6e-51 207.2 342 38.0
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 6.0e-51 206.8 340 37.1
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 6.0e-51 206.8 340 37.4
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 6.0e-51 206.8 340 37.4
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 6.0e-51 206.8 340 37.4
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 6.0e-51 206.8 340 37.4
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 6.0e-51 206.8 342 37.1
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 7.8e-51 206.5 339 36.9
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 7.8e-51 206.5 340 37.4
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 7.8e-51 206.5 343 37.3
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 7.8e-51 206.5 340 37.1
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 1.0e-50 206.1 345 37.7
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 1.0e-50 206.1 342 37.4
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 1.0e-50 206.1 363 35.5
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 1.3e-50 205.7 340 37.1
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 1.3e-50 205.7 340 37.1
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 1.7e-50 205.3 340 35.6
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 2.3e-50 204.9 340 36.5
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 2.3e-50 204.9 340 36.5
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 2.3e-50 204.9 345 38.3
Prupe.8G218700 Prunus persica HOM05D004940 ORTHO05D007805 2.3e-50 204.9 342 38.0
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 3.0e-50 204.5 340 38.2
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 5.1e-50 203.8 340 37.4
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 6.6e-50 203.4 349 35.8
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 8.6e-50 203.0 341 36.4
Peaxi162Scf00415g00416 Petunia axillaris HOM05D004940 ORTHO05D007805 1.1e-49 202.6 342 37.4
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 1.5e-49 202.2 345 36.8
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 1.5e-49 202.2 340 37.1
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 1.5e-49 202.2 340 38.5
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 1.9e-49 201.8 340 36.5
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 1.9e-49 201.8 341 38.7
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 1.9e-49 201.8 339 37.5
SGA_v2.0_scaffold1G00640 Striga asiatica HOM05D004940 ORTHO05D007805 1.9e-49 201.8 340 35.9
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 2.5e-49 201.4 340 36.8
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 3.3e-49 201.1 341 38.1
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 4.3e-49 200.7 357 36.4
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 4.3e-49 200.7 344 37.8
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 4.3e-49 200.7 340 36.5
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 5.6e-49 200.3 340 36.8
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 5.6e-49 200.3 340 37.6
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 5.6e-49 200.3 340 37.6
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 5.6e-49 200.3 340 36.5
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 5.6e-49 200.3 340 35.6
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 9.5e-49 199.5 346 37.0
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 1.2e-48 199.1 340 36.2
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 1.2e-48 199.1 340 36.8
Gohir.A08G045700 Gossypium hirsutum HOM05D004940 ORTHO05D007805 1.6e-48 198.7 340 36.8
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 2.1e-48 198.4 340 36.2
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 2.1e-48 198.4 338 35.8
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 2.8e-48 198.0 341 37.0
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 4.7e-48 197.2 338 35.2
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 6.2e-48 196.8 340 36.5
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 6.2e-48 196.8 340 36.2
CDE01G0548 Ceratophyllum demersum HOM05D004940 ORTHO05D007805 8.1e-48 196.4 264 41.3
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 8.1e-48 196.4 346 36.4
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 8.1e-48 196.4 343 37.3
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 8.1e-48 196.4 340 36.8
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 1.1e-47 196.1 342 37.1
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 1.4e-47 195.7 340 35.9
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 1.4e-47 195.7 342 37.1
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 1.8e-47 195.3 340 37.1
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 1.8e-47 195.3 340 37.1
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.4e-47 194.9 371 35.0
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 3.1e-47 194.5 338 36.7
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 4.0e-47 194.1 339 35.7
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 4.0e-47 194.1 340 36.2
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 5.2e-47 193.7 340 35.3
DCAR_018506 Daucus carota HOM05D004940 ORTHO05D007805 5.2e-47 193.7 355 35.5
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 5.2e-47 193.7 340 36.8
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 8.9e-47 193.0 339 36.0
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 8.9e-47 193.0 341 34.6
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 1.2e-46 192.6 343 36.2
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.0e-46 191.8 377 34.7
Manes.13G037500 Manihot esculenta HOM05D004940 ORTHO05D007805 2.0e-46 191.8 342 36.0
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.6e-46 191.4 377 34.7
Lj1C71G15 Lonicera japonica HOM05D004940 ORTHO05D007805 2.6e-46 191.4 340 36.8
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 4.4e-46 190.7 339 36.0
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 5.8e-46 190.3 259 41.3
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 1.7e-45 188.7 264 42.0
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 8.4e-45 186.4 264 42.4
HPP92_012807 Vanilla planifolia HOM05D004940 ORTHO05D007805 8.4e-45 186.4 329 34.0
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 1.4e-44 185.7 348 33.9
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 2.4e-44 184.9 317 35.6
MELO3C012862.2 Cucumis melo HOM05D004940 ORTHO05D007805 1.2e-43 182.6 317 37.2
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 3.5e-43 181.0 315 35.2
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 5.1e-42 177.2 317 34.7
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 2.1e-40 171.8 327 35.8
SMO181G0033 Selaginella moellendorffii HOM05D004940 ORTHO05D037547 3.4e-38 164.5 135 67.4
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 1.1e-33 149.4 258 37.2
Duzib138G0347 Durio zibethinus HOM05D004940 ORTHO05D007805 3.3e-33 147.9 208 40.4
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 1.7e-29 135.6 121 51.2
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 2.9e-29 134.8 120 51.7
SHI09716 Sapria himalayana HOM05D004940 ORTHO05D000023 3.0e-26 124.8 321 29.0
Os02g0814100 Oryza sativa ssp. japonica HOM05D004940 ORTHO05D007805 3.3e-25 121.3 94 57.4
SEGI_20278 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 3.3e-25 121.3 160 38.8
Atru.chr5.1796 Acer truncatum HOM05D004940 ORTHO05D007805 1.7e-21 109.0 260 28.5
PSO832G3423 Papaver somniferum HOM05D004940 ORTHO05D007805 3.5e-19 101.3 75 66.7
Lj1A78G31 Lonicera japonica HOM05D004940 ORTHO05D007805 1.5e-06 59.3 56 58.9
SMO270G0123 Selaginella moellendorffii HOM05D000001 ORTHO05D376091 2.0e-06 58.9 105 34.3
Lj1C79T2 Lonicera japonica HOM05D004940 ORTHO05D007805 5.9e-06 57.4 56 57.1
SalBow5G2300 Salvia bowleyana HOM05D004940 ORTHO05D007805 5.9e-06 57.4 101 33.7


User provided reference genes

Program Settings