Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.1e-43 179.5 85 100.0
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 7.1e-19 97.1 84 54.8
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 2.1e-18 95.5 81 51.9
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 6.0e-18 94.0 78 53.8
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 4.5e-13 77.8 80 45.0
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 5.9e-13 77.4 82 43.9
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 1.0e-12 76.6 82 43.9
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.7e-12 75.9 82 41.5
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.2e-12 75.5 82 42.7
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 2.2e-12 75.5 82 43.9
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 5.0e-12 74.3 82 40.2
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 5.0e-12 74.3 82 36.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 6.5e-12 73.9 82 41.5
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 6.5e-12 73.9 82 41.5
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 6.5e-12 73.9 82 41.5
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 8.5e-12 73.6 82 39.0
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 8.5e-12 73.6 82 39.0
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-11 73.2 81 40.7
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-11 73.2 82 40.2
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 1.4e-11 72.8 80 43.8
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.4e-11 72.8 81 40.7
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 2.5e-11 72.0 81 42.0
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 2.5e-11 72.0 81 43.2
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.5e-11 72.0 81 42.0
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 3.2e-11 71.6 82 41.5
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 3.2e-11 71.6 80 43.8
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 3.2e-11 71.6 82 37.8
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 3.2e-11 71.6 82 37.8
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 3.2e-11 71.6 82 37.8
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 4.2e-11 71.2 82 39.0
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 7.2e-11 70.5 83 42.2
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 7.2e-11 70.5 81 39.5
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 7.2e-11 70.5 80 41.2
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 9.4e-11 70.1 78 39.7
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 9.4e-11 70.1 80 42.5
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 9.4e-11 70.1 82 39.0
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 9.4e-11 70.1 82 36.6
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 9.4e-11 70.1 85 45.9
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.2e-10 69.7 80 41.2
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.2e-10 69.7 80 40.0
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.6e-10 69.3 80 41.2
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.6e-10 69.3 81 38.3
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 2.1e-10 68.9 81 37.0
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 2.1e-10 68.9 82 40.2
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 2.1e-10 68.9 82 40.2
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 2.1e-10 68.9 83 41.0
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.7e-10 68.6 82 40.2
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.7e-10 68.6 82 36.6
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.7e-10 68.6 79 43.0
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 2.7e-10 68.6 82 36.6
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 2.7e-10 68.6 79 41.8
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 2.7e-10 68.6 82 37.8
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.7e-10 68.6 82 35.4
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 4.6e-10 67.8 80 38.8
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 4.6e-10 67.8 81 34.6
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 4.6e-10 67.8 82 37.8
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 4.6e-10 67.8 82 37.8
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 4.6e-10 67.8 82 39.0
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 6.1e-10 67.4 80 41.2
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 7.9e-10 67.0 82 40.2
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 7.9e-10 67.0 82 36.6
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.0e-09 66.6 82 43.9
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.0e-09 66.6 82 43.9
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.0e-09 66.6 82 43.9
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.0e-09 66.6 82 43.9
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.0e-09 66.6 82 43.9
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.0e-09 66.6 80 37.5
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.0e-09 66.6 80 37.5
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.4e-09 66.2 66 40.9
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 1.4e-09 66.2 80 37.5
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.4e-09 66.2 82 43.9
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.4e-09 66.2 82 36.6
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.8e-09 65.9 80 40.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 3.0e-09 65.1 80 36.2
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 3.0e-09 65.1 81 38.3
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 5.1e-09 64.3 71 38.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 5.1e-09 64.3 81 38.3
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 6.7e-09 63.9 80 38.8
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 8.8e-09 63.5 67 40.3
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.8e-09 63.5 80 40.0
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 8.8e-09 63.5 85 40.0
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.5e-08 62.8 79 36.7
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 2.5e-08 62.0 82 34.1
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 4.3e-08 61.2 82 37.8
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.3e-07 59.7 61 39.3
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.8e-07 58.5 61 39.3


User provided reference genes

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