Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 8.7e-44 179.9 88 100.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.0e-33 144.4 86 77.9
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 2.9e-31 138.3 87 75.9
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 3.8e-31 137.9 85 72.9
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 4.9e-31 137.5 82 75.6
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 4.9e-31 137.5 87 74.7
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 4.9e-31 137.5 87 73.6
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 4.9e-31 137.5 87 72.4
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.1e-30 136.3 88 71.6
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.4e-30 136.0 88 69.3
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.9e-30 135.6 82 78.0
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 3.2e-30 134.8 88 70.5
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.2e-30 134.4 88 70.5
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 5.5e-30 134.0 86 73.3
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 5.5e-30 134.0 86 74.4
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 7.1e-30 133.7 89 71.9
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 7.1e-30 133.7 87 72.4
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 7.1e-30 133.7 88 70.5
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 9.3e-30 133.3 87 67.8
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 9.3e-30 133.3 88 70.5
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 9.3e-30 133.3 89 71.9
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 9.3e-30 133.3 88 70.5
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.2e-29 132.9 82 75.6
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.2e-29 132.9 82 76.8
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 2.1e-29 132.1 88 70.5
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.1e-29 132.1 86 73.3
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 2.1e-29 132.1 82 74.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 2.7e-29 131.7 88 72.7
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 2.7e-29 131.7 87 70.1
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.7e-29 131.7 82 74.4
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.7e-29 131.7 82 74.4
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 2.7e-29 131.7 88 69.3
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.7e-29 131.7 88 70.5
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 2.7e-29 131.7 82 73.2
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.7e-29 131.7 88 69.3
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 3.5e-29 131.3 88 68.2
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 3.5e-29 131.3 88 69.3
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 4.6e-29 131.0 88 69.3
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 4.6e-29 131.0 88 69.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 4.6e-29 131.0 82 75.6
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.6e-29 131.0 87 72.4
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 4.6e-29 131.0 88 70.5
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 4.6e-29 131.0 88 69.3
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.0e-29 130.6 88 69.3
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 6.0e-29 130.6 88 68.2
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 6.0e-29 130.6 88 69.3
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 6.0e-29 130.6 87 72.4
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 6.0e-29 130.6 87 71.3
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 6.0e-29 130.6 89 69.7
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 7.9e-29 130.2 82 74.4
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 7.9e-29 130.2 88 69.3
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 7.9e-29 130.2 88 69.3
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 7.9e-29 130.2 87 69.0
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 7.9e-29 130.2 88 69.3
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.0e-28 129.8 88 71.6
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.3e-28 129.4 82 74.4
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.3e-28 129.4 88 67.0
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.3e-28 129.4 88 69.3
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.3e-28 129.4 88 69.3
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.3e-28 129.4 88 67.0
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.3e-28 129.4 81 75.3
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.8e-28 129.0 88 69.3
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.8e-28 129.0 88 68.2
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 2.3e-28 128.6 88 70.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 2.3e-28 128.6 89 69.7
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.3e-28 128.6 88 69.3
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 2.3e-28 128.6 87 67.8
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 2.3e-28 128.6 88 65.9
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 3.9e-28 127.9 82 73.2
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 5.1e-28 127.5 82 72.0
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 6.7e-28 127.1 82 74.4
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 6.7e-28 127.1 89 68.5
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.1e-27 126.3 88 67.0
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.1e-27 126.3 87 67.8
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.5e-27 125.9 88 67.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.9e-27 125.6 88 67.0
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 3.3e-27 124.8 82 68.3
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 5.6e-27 124.0 82 70.7
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.4e-27 123.6 88 65.9
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 7.4e-27 123.6 81 67.9
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.3e-26 122.9 82 72.0
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 1.3e-26 122.9 88 64.8
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.1e-26 122.1 88 64.8
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.8e-26 121.7 79 70.9
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.2e-26 120.6 81 70.4
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.1e-25 119.8 79 72.2
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.1e-25 119.8 105 58.1
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 1.8e-25 119.0 79 69.6
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.4e-25 118.6 82 65.9
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 3.1e-25 118.2 79 69.6
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 4.0e-25 117.9 82 67.1
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 5.3e-25 117.5 82 67.1
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 9.0e-25 116.7 79 68.4
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 3.4e-24 114.8 86 64.0
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.7e-23 112.5 82 63.4
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 5.3e-17 90.9 77 61.0
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 1.8e-12 75.9 43 79.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.8e-12 75.9 43 79.1
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 9.1e-09 63.5 40 72.5
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.3e-07 59.7 38 71.1


User provided reference genes

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