Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 2.4e-157 558.9 302 100.0
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 4.8e-94 348.6 294 67.0
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 9.4e-90 334.3 262 66.4
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 2.7e-89 332.8 262 68.3
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 3.6e-89 332.4 267 64.0
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 4.0e-88 328.9 276 63.0
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 6.8e-88 328.2 274 63.1
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.2e-87 327.4 274 63.1
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 1.2e-87 327.4 292 60.3
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 3.4e-87 325.9 260 66.5
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 5.7e-87 325.1 258 65.5
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 5.7e-87 325.1 273 64.1
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.7e-87 325.1 256 66.0
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 7.5e-87 324.7 252 67.1
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 9.8e-87 324.3 236 69.9
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 1.7e-86 323.6 271 62.7
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 2.2e-86 323.2 244 66.8
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 2.2e-86 323.2 268 61.9
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 2.2e-86 323.2 285 61.8
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 3.7e-86 322.4 236 69.9
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 4.9e-86 322.0 261 64.0
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 6.3e-86 321.6 287 59.9
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 6.3e-86 321.6 252 67.9
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 8.3e-86 321.2 258 64.3
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 8.3e-86 321.2 247 66.0
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 8.3e-86 321.2 258 64.3
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 1.1e-85 320.9 258 64.0
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 1.8e-85 320.1 298 59.4
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 2.4e-85 319.7 260 65.0
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 2.4e-85 319.7 261 62.8
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 2.4e-85 319.7 258 63.6
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 3.1e-85 319.3 281 60.9
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 4.1e-85 318.9 293 58.7
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 4.1e-85 318.9 268 61.2
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 5.4e-85 318.5 287 60.3
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 7.0e-85 318.2 259 63.7
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 1.2e-84 317.4 281 60.1
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.2e-84 317.4 268 60.4
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.6e-84 317.0 268 60.8
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 2.0e-84 316.6 260 64.6
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 2.7e-84 316.2 268 60.4
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 3.5e-84 315.8 242 65.3
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 7.7e-84 314.7 266 62.4
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.0e-83 314.3 242 66.1
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 1.3e-83 313.9 299 58.5
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 1.3e-83 313.9 255 63.1
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.7e-83 313.5 258 63.2
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 2.3e-83 313.2 260 63.5
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 2.3e-83 313.2 267 61.8
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 3.8e-83 312.4 267 61.0
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 5.0e-83 312.0 260 63.1
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 6.6e-83 311.6 245 65.3
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 6.6e-83 311.6 252 63.5
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 8.6e-83 311.2 287 60.6
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 8.6e-83 311.2 270 61.1
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 1.1e-82 310.8 259 63.7
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 1.1e-82 310.8 245 65.7
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 1.1e-82 310.8 271 63.1
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 1.5e-82 310.5 268 60.8
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 2.5e-82 309.7 259 62.5
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 2.5e-82 309.7 267 61.4
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 3.3e-82 309.3 262 62.6
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 5.6e-82 308.5 263 62.4
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 9.5e-82 307.8 243 65.0
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 2.1e-81 306.6 287 58.5
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 3.6e-81 305.8 256 62.1
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 1.0e-80 304.3 253 63.6
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 1.0e-80 304.3 245 63.3
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 3.0e-80 302.8 238 66.8
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 5.2e-80 302.0 248 65.3
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 2.0e-79 300.1 263 60.5
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 1.3e-78 297.4 267 59.9
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 3.7e-78 295.8 263 59.3
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.3e-75 287.3 247 60.7
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.3e-75 287.3 212 71.7
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 4.0e-72 275.8 211 69.2
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 7.5e-71 271.6 236 63.1
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 3.6e-65 252.7 282 51.8
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 5.2e-64 248.8 261 54.0
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 2.9e-62 243.0 176 72.2
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 8.1e-57 224.9 261 48.7
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 4.4e-55 219.2 191 60.7
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 8.4e-54 214.9 165 67.9
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.7e-46 190.7 223 51.1
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 8.7e-43 178.3 137 67.9
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 3.3e-42 176.4 224 51.3
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 4.0e-40 169.5 144 63.2
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 2.9e-38 163.3 176 55.1
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 8.7e-35 151.8 118 68.6
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 8.7e-27 125.2 97 62.9
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 1.3e-17 94.7 140 40.0
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.2e-15 88.2 119 46.2
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 3.8e-14 83.2 116 45.7
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.1e-11 72.8 50 76.0
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 1.6e-09 67.8 56 57.1


User provided reference genes

Program Settings