Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 1.0e-100 370.2 199 100.0
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 2.6e-51 206.1 186 56.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.2e-45 187.2 192 50.0
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 3.6e-45 185.7 184 52.2
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 8.8e-44 181.0 189 51.3
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 4.4e-43 178.7 183 50.3
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 4.4e-43 178.7 186 52.2
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 5.7e-43 178.3 195 49.2
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.3e-42 177.2 183 49.2
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.3e-42 177.2 183 48.1
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.8e-42 176.0 183 50.8
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 2.8e-42 176.0 185 50.8
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.7e-42 175.6 180 51.1
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 6.3e-42 174.9 197 48.7
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 8.2e-42 174.5 195 46.7
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 8.2e-42 174.5 183 47.0
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.1e-41 174.1 181 50.8
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.1e-41 174.1 183 50.8
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 2.4e-41 172.9 183 47.5
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 4.1e-41 172.2 181 49.7
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.3e-41 171.8 183 48.1
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 9.1e-41 171.0 183 47.5
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 9.1e-41 171.0 183 47.5
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 9.1e-41 171.0 183 47.5
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 9.1e-41 171.0 195 46.2
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.6e-40 170.2 179 46.9
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 2.0e-40 169.9 191 46.6
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 2.0e-40 169.9 195 45.1
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 3.5e-40 169.1 183 47.0
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 3.5e-40 169.1 183 47.0
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 3.5e-40 169.1 183 47.0
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.0e-39 167.5 183 45.9
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.3e-39 167.2 195 47.7
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.3e-39 167.2 187 48.7
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 2.2e-39 166.4 195 46.7
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 5.0e-39 165.2 183 48.1
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 6.5e-39 164.9 185 47.0
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 6.5e-39 164.9 183 48.1
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 8.5e-39 164.5 183 45.9
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 8.5e-39 164.5 183 45.9
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 1.1e-38 164.1 183 46.4
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 1.5e-38 163.7 192 46.4
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 1.9e-38 163.3 186 44.6
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.9e-38 163.3 183 43.7
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.5e-38 162.9 195 44.6
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 2.5e-38 162.9 181 47.5
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 3.2e-38 162.5 187 46.0
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 5.5e-38 161.8 195 45.6
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.1e-37 159.8 194 44.8
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.1e-37 159.8 186 48.4
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 3.6e-37 159.1 217 43.3
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.7e-37 158.7 183 48.1
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 8.8e-36 154.5 183 43.7
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.6e-35 152.9 155 52.9
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.7e-34 150.2 225 38.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 5.4e-33 145.2 180 43.9
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.6e-32 143.7 161 45.3
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.0e-32 143.3 231 37.7
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 3.5e-32 142.5 195 43.1
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 7.7e-32 141.4 142 48.6
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 2.2e-31 139.8 193 42.0
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 3.8e-31 139.0 187 43.3
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.8e-31 139.0 212 39.6
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 6.5e-31 138.3 189 42.3
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.1e-30 137.5 195 42.6
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.6e-29 133.7 177 42.9
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 2.1e-29 133.3 179 41.9
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.1e-29 133.3 183 40.4
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 4.7e-29 132.1 206 39.8
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 4.7e-29 132.1 222 39.2
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 8.8e-28 127.9 142 46.5
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.9e-23 112.8 110 50.9
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 9.5e-22 107.8 126 43.7
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.8e-20 103.6 108 49.1
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.3e-18 97.4 99 47.5
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.2e-18 96.7 97 48.5
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.7e-18 95.9 183 33.9
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 8.3e-18 94.7 178 31.5
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 3.2e-17 92.8 186 33.9
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 2.7e-16 89.7 99 46.5
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 4.3e-14 82.4 88 47.7
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.6e-13 80.5 93 40.9
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 5.2e-12 75.5 183 27.3
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 6.4e-10 68.6 79 41.8
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 2.4e-09 66.6 74 48.6
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.2e-09 66.2 78 43.6


User provided reference genes

Program Settings