Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 6.7e-190 667.2 327 100.0
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.7e-97 360.1 313 56.9
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 4.2e-91 339.0 314 55.1
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 5.6e-88 328.6 303 54.5
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 5.6e-88 328.6 299 55.9
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.6e-87 327.0 302 54.6
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 2.8e-87 326.2 302 55.0
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 6.2e-87 325.1 299 54.5
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 1.1e-86 324.3 303 53.8
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.4e-86 323.9 299 54.8
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 1.8e-86 323.6 299 54.8
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 2.4e-86 323.2 306 56.2
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 4.0e-86 322.4 299 53.8
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 4.0e-86 322.4 303 52.8
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 4.0e-86 322.4 299 54.5
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.5e-85 320.5 303 55.4
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 2.0e-85 320.1 308 53.9
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.6e-85 319.7 305 53.4
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 2.6e-85 319.7 298 54.4
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 3.4e-85 319.3 305 53.4
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 3.4e-85 319.3 305 53.8
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 4.4e-85 318.9 299 52.2
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 7.6e-85 318.2 299 53.8
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 7.6e-85 318.2 304 53.6
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 7.6e-85 318.2 301 54.2
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 7.6e-85 318.2 307 54.4
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 9.9e-85 317.8 301 52.2
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 9.9e-85 317.8 295 55.3
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.3e-84 317.4 303 54.5
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.3e-84 317.4 299 51.8
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 2.2e-84 316.6 301 52.2
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 6.4e-84 315.1 305 51.5
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 6.4e-84 315.1 306 52.6
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 6.4e-84 315.1 301 53.2
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 8.4e-84 314.7 305 52.5
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.4e-83 313.9 302 51.7
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.9e-83 313.5 303 52.8
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 2.4e-83 313.2 307 52.4
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 4.2e-83 312.4 305 52.5
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.4e-83 312.0 305 51.8
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 5.4e-83 312.0 300 54.0
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 5.4e-83 312.0 304 51.6
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 7.1e-83 311.6 303 53.1
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 9.3e-83 311.2 316 52.2
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 9.3e-83 311.2 295 56.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 9.3e-83 311.2 299 52.5
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.2e-82 310.8 301 53.5
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 1.2e-82 310.8 301 52.8
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 2.1e-82 310.1 297 52.9
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 2.7e-82 309.7 301 52.8
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 3.5e-82 309.3 306 51.6
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 3.5e-82 309.3 303 51.8
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.0e-82 308.5 310 51.6
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 6.0e-82 308.5 269 56.9
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 6.0e-82 308.5 303 53.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 7.8e-82 308.1 303 52.1
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 1.0e-81 307.8 304 52.6
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.0e-81 307.8 301 52.5
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.7e-81 307.0 300 51.7
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 2.3e-81 306.6 300 51.7
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 3.9e-81 305.8 321 50.2
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 6.6e-81 305.1 312 51.3
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 8.7e-81 304.7 329 49.2
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.5e-80 303.9 298 53.7
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 2.5e-80 303.1 297 51.9
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 2.5e-80 303.1 302 51.7
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 2.5e-80 303.1 301 51.5
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 2.5e-80 303.1 300 52.7
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 4.3e-80 302.4 300 50.7
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 4.3e-80 302.4 334 48.8
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 7.3e-80 301.6 333 49.2
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.3e-79 300.8 299 50.2
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 4.8e-79 298.9 300 51.0
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 4.8e-79 298.9 281 54.8
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 6.2e-79 298.5 297 51.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.4e-78 297.4 306 50.0
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.8e-78 297.0 328 49.1
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 2.4e-78 296.6 303 50.8
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 3.1e-78 296.2 300 50.0
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 9.0e-78 294.7 291 51.9
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 9.0e-78 294.7 294 51.7
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 2.6e-77 293.1 300 50.7
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.6e-77 293.1 304 51.0
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 3.4e-77 292.7 300 50.0
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 1.3e-76 290.8 300 50.0
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 1.1e-75 287.7 300 50.0
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 1.4e-75 287.3 284 52.8
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 1.2e-74 284.3 347 44.7
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 2.1e-74 283.5 300 49.3
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 2.1e-74 283.5 358 45.8
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 3.5e-74 282.7 285 50.9
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 2.5e-72 276.6 306 47.4
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 4.0e-70 269.2 283 53.4
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 4.0e-70 269.2 288 51.7
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 2.1e-66 256.9 283 51.6
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.5e-64 250.0 294 46.6
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 6.2e-63 245.4 301 45.5
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 8.2e-63 245.0 303 44.2
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 1.4e-62 244.2 299 44.8
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 5.8e-61 238.8 299 45.2
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 1.3e-60 237.7 199 60.8
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 1.2e-58 231.1 224 52.7
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 6.7e-57 225.3 374 38.5
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 6.7e-57 225.3 284 44.4
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.9e-56 223.8 303 43.9
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 3.3e-56 223.0 216 51.4
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 7.4e-56 221.9 228 49.1
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.1e-51 208.0 224 49.6
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 2.5e-51 206.8 281 43.8
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 8.8e-49 198.4 214 49.1
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 2.2e-47 193.7 203 51.7
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 5.3e-46 189.1 195 48.7
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.1e-43 181.4 193 52.3
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 4.2e-43 179.5 193 46.6
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 9.4e-43 178.3 201 44.8
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 6.7e-41 172.2 143 55.2
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.1e-38 164.9 168 53.0
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 5.0e-36 156.0 97 83.5
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 8.8e-33 145.2 291 34.7
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 4.4e-32 142.9 233 40.3
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 9.7e-32 141.7 298 33.2
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 2.2e-31 140.6 166 43.4
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 3.8e-28 129.8 143 44.8
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 8.5e-28 128.6 280 32.1
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.9e-27 127.5 103 57.3
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 1.4e-25 121.3 127 50.4
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.2e-25 119.4 130 50.8
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.7e-23 114.4 82 72.0
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.2e-21 108.2 276 30.1
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 1.0e-20 105.1 119 46.2
SMO174G0203 Selaginella moellendorffii HOM05D005792 ORTHO05D375563 1.7e-15 87.8 114 51.8
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.4e-14 84.7 78 55.1
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 5.2e-09 66.2 72 44.4
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 4.4e-08 63.2 49 55.1
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.7e-07 61.2 50 58.0
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 4.9e-07 59.7 49 55.1
SMO174G0150 Selaginella moellendorffii HOM05D005792 ORTHO05D374651 1.8e-06 57.8 51 64.7


User provided reference genes

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