Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.0e-47 193.0 92 100.0
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 8.2e-37 156.8 97 83.5
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.4e-28 128.6 81 82.7
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 5.4e-20 100.9 85 61.2
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 9.1e-20 100.1 85 60.0
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 1.2e-19 99.8 85 61.2
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 1.6e-19 99.4 83 60.2
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 2.0e-19 99.0 85 61.2
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 2.7e-19 98.6 85 61.2
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 3.5e-19 98.2 83 57.8
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 4.5e-19 97.8 85 56.5
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.9e-19 97.4 85 57.6
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.9e-19 97.4 85 57.6
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 5.9e-19 97.4 85 60.0
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.7e-19 97.1 85 57.6
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 7.7e-19 97.1 85 58.8
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 7.7e-19 97.1 81 60.5
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.0e-18 96.7 81 61.7
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 1.0e-18 96.7 85 58.8
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.0e-18 96.7 83 60.2
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 1.0e-18 96.7 83 60.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.3e-18 96.3 81 59.3
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.3e-18 96.3 85 58.8
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 1.3e-18 96.3 79 62.0
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.3e-18 96.3 85 58.8
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 1.7e-18 95.9 81 60.5
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 2.2e-18 95.5 83 55.4
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.2e-18 95.5 85 56.5
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.2e-18 95.5 81 60.5
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 2.2e-18 95.5 81 59.3
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 2.9e-18 95.1 85 57.6
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 3.8e-18 94.7 79 59.5
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 3.8e-18 94.7 81 60.5
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 5.0e-18 94.4 85 55.3
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 5.0e-18 94.4 82 57.3
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 5.0e-18 94.4 79 59.5
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 5.0e-18 94.4 85 57.6
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 5.0e-18 94.4 83 55.4
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 5.0e-18 94.4 85 58.8
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.0e-18 94.4 81 61.7
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 6.5e-18 94.0 82 57.3
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 6.5e-18 94.0 81 60.5
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 6.5e-18 94.0 85 56.5
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 6.5e-18 94.0 81 60.5
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 6.5e-18 94.0 81 60.5
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 8.5e-18 93.6 79 59.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 8.5e-18 93.6 82 58.5
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 8.5e-18 93.6 82 57.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 8.5e-18 93.6 82 58.5
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.1e-17 93.2 81 58.0
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 1.1e-17 93.2 86 55.8
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 1.1e-17 93.2 81 59.3
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.1e-17 93.2 82 59.8
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.1e-17 93.2 81 60.5
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.1e-17 93.2 83 56.6
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.5e-17 92.8 81 58.0
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.5e-17 92.8 81 59.3
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 1.5e-17 92.8 85 57.6
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 1.9e-17 92.4 82 56.1
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 2.5e-17 92.0 82 57.3
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 2.5e-17 92.0 82 56.1
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 2.5e-17 92.0 82 56.1
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 2.5e-17 92.0 81 58.0
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 3.2e-17 91.7 85 57.6
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 3.2e-17 91.7 82 54.9
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 3.2e-17 91.7 82 54.9
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.2e-17 91.7 83 56.6
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 4.2e-17 91.3 82 54.9
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 4.2e-17 91.3 83 54.2
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 4.2e-17 91.3 81 56.8
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 4.2e-17 91.3 85 56.5
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 4.2e-17 91.3 81 58.0
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 5.5e-17 90.9 81 56.8
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 5.5e-17 90.9 81 58.0
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 5.5e-17 90.9 84 57.1
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 5.5e-17 90.9 81 59.3
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 7.2e-17 90.5 82 57.3
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 7.2e-17 90.5 83 54.2
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 7.2e-17 90.5 81 58.0
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 9.5e-17 90.1 83 54.2
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 9.5e-17 90.1 82 57.3
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.2e-16 89.7 82 57.3
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.2e-16 89.7 81 56.8
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 1.2e-16 89.7 85 56.5
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 1.2e-16 89.7 86 55.8
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.2e-16 89.7 87 52.9
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.6e-16 89.4 79 58.2
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.1e-16 89.0 81 59.3
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 2.1e-16 89.0 81 58.0
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.8e-16 88.6 82 58.5
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.8e-16 88.6 79 55.7
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.8e-16 88.6 81 55.6
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.6e-16 88.2 81 55.6
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 3.6e-16 88.2 81 56.8
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 3.6e-16 88.2 83 53.0
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.6e-16 88.2 81 58.0
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 3.6e-16 88.2 85 49.4
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 3.6e-16 88.2 83 51.8
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 8.0e-16 87.0 85 55.3
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 1.8e-15 85.9 77 57.1
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 2.3e-15 85.5 81 54.3
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.0e-15 84.7 81 53.1
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.2e-15 84.3 81 58.0
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 2.6e-14 82.0 101 45.5
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.6e-14 82.0 85 52.9
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.6e-14 82.0 76 57.9
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 3.4e-14 81.6 103 44.7
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 9.8e-14 80.1 109 43.1
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.2e-13 79.0 77 53.2
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.8e-13 78.6 55 69.1
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.7e-13 78.2 58 65.5
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 8.3e-13 77.0 81 50.6
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 4.1e-12 74.7 85 49.4
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.1e-12 74.7 81 49.4
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 1.5e-09 66.2 58 55.2
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 5.6e-09 64.3 76 48.7
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 3.6e-08 61.6 82 47.6
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.4e-07 59.7 76 46.1
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.2e-06 56.6 80 33.8


User provided reference genes

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